Chenopodium quinoa (quinoa): 110733066
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Entry
110733066 CDS
T05764
Name
(RefSeq) BRCT domain-containing protein At4g02110-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110733066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cqi03032
]
110733066
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110733066
DNA replication proteins [BR:
cqi03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
110733066
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
110733066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
110733066
NCBI-ProteinID:
XP_021768779
LinkDB
All DBs
Position
Unknown
AA seq
1641 aa
AA seq
DB search
MEAQIGKPKHQPNKTTLEFQNNPRVNPLKFPFFFNSPATNPKISKKTKKKPKASPTLQLF
SSSLHFLSPLLHSLSKIPPFSNTQKNSVKMMYGSSIFFGIRFFLAGFTPQQILEYKSRIL
SEGGVIYDDYSPDCTHVVVHNLAFDDPICVTARRDKKTLVTIIWLKDSLRYGEPIGIGNI
MYRPLKDLNGIPGANKLIICLTGYQGMDREDMKMMVQLMGAQISKPLVVSTVTHLICYKF
EGEKYELAKKMNVTKVVNHRWLVDCLEAWKILPEEPYSSRSGYELDMEAEAKDSEDEVED
ISGRNNDGITIMQNEMGKAHSHFVLARNLPDPSTQQGFSHNDGKLLQSDNSDFLKSASVN
KLGKQPVLDRRAQSLMEAKVDNVDEPRAAFPLSNQTGNGRPSTSENPKNAGDFDAENCNS
LKYSRKTPQKTALPSHVEEGLGNTIGSLKAPLSSRKTPRSGASLQTAGKSGKSGGRSKDK
STKKIIEDMPTFNLDIDKAEDASGFLGEPSSKRHDESDASKLNSLKSRKSPAKSSLSLQS
PGKLSNQDGKLEIPLAEKVIADVCTFNIGPDQGKATSECRATSAEKANLFDENGPGALLP
QKRTSDGASHSTPKSQKLTSSASKRVDASEPHEKRSSGALNSGCQIGDEFATPSVGRSSP
NVSSSKLKAKTVASSRSLAFEMLQGGEPMNTDSPTTPFTNSVSTSPVVGNNNGQPQTLQK
VTDTSLGTNDLEAEKSGNLKLNSTDQNDIPKPSKKKMVARKTLGSKSKVCRRSADVQRSC
ASKDSFRDDAAIHSAGQENKEPPTASPAADKVFVPPAVEESNGLGSKPHLGTESNNFATL
LDDETEAPPELNVDNEPLAAEQSLLVKSKSGEASGMLLHQTDGQGMPVAETVDMKKNLIS
QKGLAVKARKKSLLAAKEAAKDADEAEAGKVKEQVGGVAAKKRRGTLLLNKSKRPVEAGK
EIEPISYDRVEVGREHELDCNDQYENKGGKQSGKLAVKSRRGTLLSNRSKGPVEVNNEND
LVDCYDGQNGSKNCPADLAAPSNMTLDNMEIKRKNDTGVFTDQGTRKVSKRSGKLKMSNA
PAEAEMENEPVLDGGQYSGKQVGAPGILDSSVEVDKENEPILATNLDTSKGVKRAGKLAG
KKKGGTLLLNKYEGQVNEENKNKPDLDDEEVTNKGGIFTEKLTSKSNSTINESDAVKGGK
RAGKLVGKKRRGTLVINKSEVQVNEGNENKLVLDDEVDTSNGTEKLTSKPNLTVNESDAA
SKDGKRAGKLPGKKRRGTLVLNKSQVQANEESRNKSVLDGDEDASNGKEELTSKSNMLVN
ESDTAFSNPLNIELKKVQKQAACFILCGHRLQRKEFQQLIKRLRGKVCRDSHQWSYQASH
FVVPEPIRRTEKFFAAAASGSWILKTDYLIASSQAGKFLPEEPYEWHKTALSEDGAISFE
APRKWRLLREKTGHGAFYGMRIVIYGECIAPPLDTLKRVIKAGDGTILATSPPYTRILES
GVDFAIVSPGMPRVDLWVQEFLKHQIPCVLADYLVEYVCKPGYTLDRHVQYNTHEWAAKS
FSKLLSLSEEVVADNITPPDDQVSDDLGCQVCGSTDRGEVMLVCGDESGSTGCGIGTHID
CCDPPLESIPEEDWFCPKCTE
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccaaattggtaaacccaaacatcaacccaataaaacaacactagagttccag
aacaatccacgtgttaaccccttaaaatttccttttttttttaattctcccgccactaac
ccaaaaatttcaaaaaaaacaaaaaaaaaacccaaagcttctccaacactacaactattt
tcttcttctctccattttctctctcctcttcttcactctctctccaaaattccgccattt
tcaaacactcagaaaaactctgtaaaaatgatgtacggttcatctatcttcttcggaatc
cgcttcttccttgctggattcactcctcaacaaatcctcgagtataaatccaggattttg
agtgaaggaggagtaatttatgatgattatagtcctgattgtactcacgtcgtcgtccac
aacctcgcctttgatgatcctatctgtgttactgctagaagggacaagaagacgcttgta
acaattatatggcttaaggatagtttacgatatggagaaccgattggcattggtaatatc
atgtataggccactgaaggatctgaatggaattcctggtgctaacaagcttatcatctgt
ttgactggataccaagggatggatagggaagacatgaagatgatggtgcaattaatggga
gcacaaatttctaaaccattggtggtcagcacagttactcatcttatatgctacaagttt
gaaggggagaagtatgagctggctaagaaaatgaacgttacaaaagttgtcaaccatcgg
tggttggtagattgcctggaggcttggaaaattcttccagaggagccttatagcagtaga
agtggctatgaattagacatggaagctgaggctaaagattctgaagacgaggttgaagat
atatctggaagaaacaatgatgggattactataatgcaaaatgaaatggggaaagctcat
agtcatttcgtgcttgcaaggaatttgccagatccttctacacaacaaggattctctcat
aacgatggaaaattgctgcaatctgataactctgattttctcaagtctgcaagtgttaat
aagttgggtaagcagcctgtactggaccgtagagctcagtctttgatggaagctaaagtt
gataatgttgatgaaccaagagctgcgtttcctctgtctaatcagactggaaatggccgt
ccctctacttctgaaaatccgaagaatgctggtgattttgatgctgagaattgtaatagt
ctaaaatactcaaggaagactccacagaaaactgctcttccgtcgcatgttgaagagggc
ttggggaacacaattggatcattaaaagctccattgagctcaagaaaaactccaaggtct
ggggcttctttgcaaactgcaggaaagtctggcaagtcgggtgggagatcgaaagataaa
tcaactaaaaagataattgaagacatgcctacgtttaatctggacatagacaaggcagaa
gatgcttcaggtttccttggtgaaccaagttccaaaagacatgatgaatctgatgctagc
aagcttaattctttgaaatcaagaaaatcaccagcaaagtctagtctatccttgcaatca
ccgggaaagttgagcaatcaagatggaaaattggaaattcctcttgctgaaaaggtgatt
gctgatgtgtgcaccttcaatatagggccagaccaaggaaaagctacttctgaatgtaga
gcaacaagtgcagagaaggctaatttatttgatgagaacggtccgggtgctttacttcca
caaaagaggacttcagatggtgcttctcactctactcccaaatctcagaagttaacatct
tcagccagtaaacgagttgatgcatcagaacctcatgagaaaaggagtagtggggccctt
aattctggctgccaaataggagatgaatttgccacaccatctgtaggtaggtcatcccct
aatgtttcatcttccaagctcaaagcaaagaccgttgcttcctctagatctttggctttc
gagatgctgcaaggcggtgaacctatgaacacagattctccaactaccccttttaccaat
agtgtttctacttcaccagttgttggtaacaacaatgggcaaccccagactctgcagaaa
gtcactgatacgtctcttggcaccaatgacttggaggctgagaagtctggtaatcttaag
ctgaactctactgatcaaaatgatattccaaaaccatcaaagaagaaaatggtggctagg
aagactttgggttccaaatctaaagtatgtagaagaagtgctgatgttcagagaagttgt
gccagcaaagactcttttcgagacgatgcagccatacactcagctggtcaggaaaataaa
gagccgcctacagcttcacctgctgctgataaagtttttgtgccccctgcagtagaagag
tcaaatggtttgggttcaaagcctcacctgggtactgaaagcaataattttgctacactt
ttagatgatgaaaccgaagctccaccagaattgaatgtggataatgaacctttggcagct
gaacagtcgcttttagtgaaatcaaaatccggagaggcatctggcatgctgcttcatcaa
acagatgggcagggaatgcctgtggctgaaactgttgatatgaagaaaaacttgatttcg
cagaagggattggccgttaaagctaggaaaaagtctctgcttgctgcgaaggaagctgct
aaagatgcagatgaggctgaagccggaaaagtgaaggaacaagttggtggtgttgctgca
aaaaaaagacgtggtactctgttgttgaataagtcaaagaggcctgttgaagcggggaaa
gaaattgaacccatttcttatgatcgtgttgaagtaggaagagaacatgaacttgattgt
aatgatcaatatgaaaataagggtggtaaacagtcagggaagttagctgtgaagagtagg
cgtggaactttactatcaaacaggtcaaagggccctgttgaagtgaataatgaaaatgac
cttgttgattgttacgatggtcaaaatggcagtaaaaattgccctgcagatctggctgct
ccttccaacatgacactggacaatatggaaatcaaaaggaaaaatgacactggtgttttt
actgaccaaggcacaagaaaggtttcaaagcgctctgggaagttaaaaatgtcaaatgcc
cctgccgaagcagaaatggaaaatgagccggtccttgatggtggacaatactctgggaag
caggttggtgcacctggtatcttagatagttctgtggaggttgacaaagaaaacgaacct
atcctcgctactaatttagatactagtaagggtgtaaaacgtgctggtaaattagcaggg
aagaagaagggtggtactctattgttaaacaagtatgaggggcaagtcaatgaggagaat
aagaataagccagatcttgatgatgaagaagttacaaataaaggtggaatattcactgaa
aagctgaccagtaagtccaattctacaatcaatgagagtgatgcagttaagggtgggaaa
cgtgctggtaaattagttgggaaaaagaggcgtggcaccttagttataaacaaatctgag
gtgcaagtcaatgaggggaatgaaaataaattagttcttgatgatgaagttgatacaagt
aatggaactgagaagctcaccagtaagcccaatttgacagtcaatgagagtgatgcagct
agcaaggatggaaaacgtgctggtaaattacctgggaaaaagaggcgtggcacactagta
ttaaacaaatcacaggtgcaagccaatgaggagagcagaaataagtcagttcttgatggt
gatgaagatgcaagtaatggaaaggaggagctgaccagtaagtccaatatgctagtcaat
gagagtgatacagctttttcaaatcctttgaacattgagttgaaaaaggttcaaaaacaa
gcagcatgtttcatactttgtggacatagactacagagaaaagagttccaacaactcatc
aagcgtctcagaggaaaagtatgccgagattctcatcaatggtcatatcaggcttcacat
tttgttgttccagaaccaatccgtagaacagaaaagttctttgctgctgcagcatctggg
agttggattttgaagactgattacttgattgcgagcagtcaagccggaaagttcttgcct
gaggaaccttatgagtggcacaagactgccctcagtgaagatggtgctattagtttcgag
gctccaagaaagtggcgccttctaagggagaagacaggtcatggtgctttttatggcatg
cgaattgtaatatacggagaatgcattgctccacctctggataccttaaagcgagtaata
aaggctggagatgggactatccttgctacttctccaccttacacccgtattcttgaatca
ggagtggattttgccattgttagtcctgggatgccacgcgttgatttatgggtacaagag
tttctcaaacaccaaattccttgtgttttggctgattacttggtggagtatgtttgcaag
cctggatacactctagataggcatgttcaatataacacccacgagtgggctgctaagtca
ttttcaaagctcttgagcctgtcagaagaggttgtagccgataatattacaccaccagat
gatcaggttagtgatgacctcggatgtcaagtttgtggctcaactgatagaggggaagtc
atgttagtttgtggtgatgagagcggttccactggctgtggaatcggaactcacattgat
tgttgtgatcctcctctcgagagtatccctgaagaagactggttttgtcccaaatgtact
gaataa
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