Chenopodium quinoa (quinoa): 110733291
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Entry
110733291 CDS
T05764
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL30
KO
K12900
serine/arginine-rich splicing factor 10
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110733291
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cqi01009
]
110733291
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110733291
Protein phosphatases and associated proteins [BR:
cqi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110733291
Spliceosome [BR:
cqi03041
]
Common components
Common spliceosomal components
SR proteins
110733291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
110733291
NCBI-ProteinID:
XP_021768994
LinkDB
All DBs
Position
Unknown
AA seq
282 aa
AA seq
DB search
MRRYSPGYYSPPRRGYSSRGRSPPRGGYSPPRRGYSPPRRGHGGYGRRKEPNHGSLLVRN
IPLDCRPEELRVPFERFGLVRDVYIPKDYYTGEPRGFAFVQFVDSYDASEAQYHMNGQIF
AGREISVVVASESRKRPEDMRRKTRQRSGGPRYGGRRSPGYRRSRSRSVSRSRSPRFRSG
SGSKGVHHSRSYSPSPRRHEEYSASPSRRPVDRSRSPRDSPRGGDARKSFSPDHEDRNET
AVGKAKYEAEEERGRGDPPRRVSRSPSGSRSRSADASPAPSR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggtacagccctggttattacagtcccccacgaaggggttatagtagtagagga
agaagccctccgagaggtggatatagccccccgagacggggttacagtcctccaagaaga
ggacatggtggttatggaagacgcaaggagccaaatcatggaagcttgttggttcgtaac
attccattagactgcagacctgaagaacttcgagttccttttgaaagatttgggcttgtc
cgtgatgtctatatcccaaaggattattatacaggggaacctcgtggctttgcctttgtg
cagtttgtggactcttatgatgcttcagaggctcaatatcacatgaatgggcagattttt
gctggacgagagatcagtgtagttgttgcttcagagtcgagaaaaaggcctgaggacatg
cgcaggaaaaccaggcagagaagtggtggtccacgatatggtggacgaagatcacctggc
tacagacgctctcgttcacgatcagtttcccgctcacgctcgcctcgctttcgctctggt
tctggctctaaaggagttcatcactcaaggtcctattccccctctcccagaagacatgag
gagtactcagcctctcctagtaggaggcctgttgatcgctcaagatcaccaagggattca
ccacgtggtggagatgcccgtaaatcattttcccctgatcatgaagatcgtaatgaaact
gctgttgggaaagctaaatatgaagctgaggaagaacgaggccgcggagatcctccaagg
cgtgtttctagatcaccatctggctcaagatctcgatctgcagatgcgtcaccagcccct
agtagatga
DBGET
integrated database retrieval system
