Chenopodium quinoa (quinoa): 110733494
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Entry
110733494 CDS
T05764
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cqi03009
]
110733494
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110733494
Ribosome biogenesis [BR:
cqi03009
]
Eukaryotic type
Pre-60S particles
Helicases
110733494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
110733494
NCBI-ProteinID:
XP_021769245
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
METTAEINTNKALTNTLFSDLKPPLSEPVIEALHQGGFHYCTPVQAATIPLLCTYKDVAV
DAATGSGKTLAFVVPLVEILRRSNPSPKPHQVLGIIISPIRELSSQIYNVALPFISTLSN
VKPMLLVGGGDIKTDLRKIEEDGANVLIGTPGRLFDIMERVDVLEFRDLEVLILDEADRL
LDLGFQKDINKIISRLPKIRRTGLFSATQTEAVEELSKAGLRNPVRVEVRATATANISKI
PSGLHIEYLECEADRKSSELVDLLVKYKSKKIIIFFMTCACVDYWGVVLPQLTVLKGHSI
IPIHGKMKQSARKKASESFTGLSSGVLLCTDVAARGLDIPGVDCVLQFDPPQDPNVFNHR
VGRTARMGKEGSAVVFLLPKEESYVEFLRIRRVPLQKRECSNGPDVVPQIRSVAIKDRDV
VQKGQKAYVSFIRAYKEHHCSYIFRWKELEYGKLGMGYGLLQLPLMSEVKLHGLSTEGFT
PVEGVKLQEIKFKDKSREKQRKKNLLEKQSEVNQNRKTLKHKPAPNKTAAMKKTTAKKRR
AVQTKEDVDDLTREYRLLKKLKKGTIGEDEYARLMGADDLLD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggagacgacggcggaaatcaacacaaacaaggcgttgacaaacacccttttctctgac
cttaaaccgcctctctctgaaccggttatcgaagctcttcatcaaggtggttttcactac
tgtactccggttcaagccgccactatccctttactttgcacctacaaagatgtcgccgtc
gatgccgccaccggttcaggaaaaacccttgcttttgttgtcccacttgttgaaattctt
cgtcggtctaacccttctcctaaaccccatcaagtgttaggaataattatttctccgatt
agggagttgtcatcacaaatatataatgttgccctgccttttatatcaacactttcaaat
gtcaagccaatgcttcttgttggaggaggggatattaaaacagatttgagaaagatagag
gaggacggggcaaatgtattgattgggacaccaggaaggttgtttgacatcatggaacgt
gtagatgtcttggaatttcgtgaccttgaggttttgattctggacgaggcagacaggctt
ttggatttgggttttcaaaaggacattaataaaataatatcgcgcttaccaaagattcgt
agaactggtttgttttctgccactcaaacggaggcagttgaggagctttctaaagctggg
ttaaggaatcctgtgagggttgaagttcgtgcaactgcaacagcgaacatttcaaaaata
ccctcgggccttcatattgagtatctggagtgtgaggcagacaggaagtcatcggagctt
gtcgaccttcttgtcaaatacaaatccaaaaagattataatcttctttatgacttgcgct
tgtgttgattactggggagttgtgcttccacaacttactgtactgaaaggtcattcaata
attcctattcatgggaaaatgaaacagagtgctagaaaaaaagcttcagaatcatttacg
ggtctttcaagtggtgttcttctttgtactgatgttgctgctcgtggattggacatacca
ggcgttgactgtgttttgcagtttgatcccccacaagatccaaacgtatttaatcataga
gttggacgaactgctcgcatggggaaagagggaagtgctgttgtctttctgttgcccaag
gaagaatcatatgttgaatttctgcggataaggagggtgcctcttcagaaaagggagtgc
tctaatggtcctgatgtcgttccccagatcaggtctgttgcaataaaggatcgtgatgtt
gtgcagaaaggacaaaaagcctacgtctctttcatccgtgcatataaggagcatcattgc
tcttatatattcaggtggaaagaactggagtatggaaagttggggatggggtatggttta
ttgcagctacctttaatgtcagaagtaaagcttcacggactgtcaacagaaggtttcact
ccagttgagggtgtgaagttacaggagatcaaatttaaggataaatctcgtgagaaacaa
agaaaaaagaatttgctggagaaacagtcagaagtaaaccagaatcgaaaaacactaaag
cacaaacctgccccaaataagactgctgcaatgaagaagacaacagcaaagaaaagacgt
gctgttcagactaaggaagatgtagatgacttaactcgggagtaccggcttttgaagaag
ttgaaaaaaggtactattggtgaggatgagtatgcaaggttaatgggagccgatgatttg
ctggattga
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