Chenopodium quinoa (quinoa): 110733501
Help
Entry
110733501 CDS
T05764
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110733501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110733501
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
110733501
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
Motif
Other DBs
NCBI-GeneID:
110733501
NCBI-ProteinID:
XP_021769251
LinkDB
All DBs
Position
Unknown
AA seq
1305 aa
AA seq
DB search
MRKRSLHLALHPFDDHPFEIFYQGMWKSVDRLRISSGTITFSFLDLGYLFEEKSFLSTLR
LRPRRATLTDCTCVLRPGADVSVFSTPDDAEESSEGSPAGWFDARITSVERKPHESECNC
KFYIKFFYISDDNAGTDRKKLSKEIETVGINQISVLQVLEQRPSENTHYRWNLAEDCTSL
SRTKLFLSKFASDISWLLVTSVQNQTVFDVRAIEKKIVYQILDTNFSPYSTSVRLSSVSF
RTDGDITFSAVFSFVPMDNEQVQPVPEVKEEEDPLSGYELTELRRSKRRNVQPERYLGEI
GLEVTDTTALRIGYKFWNQEDLAIVLVNNDEDTSHSVLEDPQQNLQHAIELYSGDRIGVE
TIDENLAKDGLSDEDSQNQKRQKRKYVRKEKENKKKNAEKAGTDNQLAIVPLPGDSNQMP
REQSNLLNEIRPNPLDIDDDNVPLKFYKRRFRERTTSTSMSGRMKKISELDDYDHEPGRG
RRNFSHKQNQKFKHRAFASSRSDKHSEDPSRNKKKPLDISAYKDLISTYMKNIQLTIENK
QPISTDAWKNLQGASSMYEKKAADEARPPEEVEEEEESETEMLFREMDLCLASAYFEEEH
SKAEDGDEPAEKFFKNDGSCQHVFTIDDEIGILCRLCGYVITEIRDVTPPFMRQSGFTAK
HDRNDNKTEKDDTEHKLLDEACADLVYNPASYETLVSESNDNVWGLIPSIKKKLHDHQKK
AFEFLWRNLAGSLIPSEMEPSSKKVGGCVISHAPGAGKTFLIIAFLVSYLKLFPGKRPLV
LAPKTTLYTWYKEIIKWEFPVPVYQIHGRRTYRDRIYMQKVGTASSSLVPNGDIMHVLDC
LEKIQKWHAHPSVLLMGYTSFLSLMREDSKYAHRRYMGQILRESPGILILDEGHNPRSTK
SRLRKALMRVDTEFRILLSGTLFQNNFGEYFNTLCLARPKFVDEVLRVLDPKYKKKIKGQ
NKTRTSIENRARKVFMDIIARKINSSETEERADGLNMLKNMTNKFIDVYEGGGSENLPGL
QSYTLMMKPTPLQHEILVRLHKHMNVARGFPLELELMITLGSIHPWLIKSAVCANKFLSL
EELQSLDEFRLDPTKGSKVKFVLGLVQRSIIRREKVLIFCHNIAPINLFLELFERIYGWK
KGHEVLVLQGDLELFERGRVMDKFEERGGPSKVLLASINACAEGITLTAASRVVLLDSEW
NPSKQKQAIARAFRPGQEKIVYVYQLLVNGTLEEDKHGRTTWKEWVSCMIFSEEHVDDPS
KWQAEKIEDALLREIVEEDHAKSFHMIMKNERASYENPLKVITEE
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaagaagtcttcatctggctttacatcctttcgatgatcatccctttgagata
ttctatcaaggtatgtggaaatctgtggatcgattaagaatcagttcggggactataacg
tttagcttcttggaccttggatatttgttcgaggaaaagagttttctttctaccctgagg
cttcggccaagaagagcaactttgactgactgcacctgtgtgctaagacctggtgctgat
gtttctgtgttctctacacctgatgatgcagaagaatcatccgagggatcccccgcagga
tggtttgatgcaagaataacttctgttgagaggaaaccgcacgaatctgaatgcaactgc
aagttttacatcaaattcttctacatcagtgatgacaatgctggaactgacagaaaaaaa
ctaagcaaggaaatcgagactgttgggatcaaccaaatatccgttttacaagttctcgag
caaaggccttcagaaaatacacattataggtggaacctggcagaagactgcacatcattg
tcgaggactaaactatttctatctaagttcgcttctgatatatcttggcttcttgtgaca
tcagttcagaatcagactgtattcgatgtaagagcgatagaaaagaagatagtctaccaa
atattggacaccaacttcagtccttattcaacttctgtccgtctaagtagcgtgagtttc
aggacagatggtgatattacattctcagctgttttctcatttgttccgatggacaatgag
caagtacagcctgtcccagaggtgaaggaggaagaggatccactttctggatacgagctt
acagagttaaggcgatcaaaacgtcgtaatgtacagcctgagcgttatttgggtgagata
ggtctcgaggtgactgatactactgcactcagaatagggtacaagttttggaatcaggaa
gatttggccattgtacttgtaaataacgacgaagatacaagtcattctgttttagaagat
cctcaacaaaatctccaacatgctattgagttatattcaggggatcgcattggagttgag
acaatagacgagaatcttgctaaagatggtcttagtgatgaagacagtcaaaatcaaaag
cggcagaagcgaaaatatgtcagaaaagagaaggagaacaagaaaaagaatgctgaaaaa
gcaggaacagataaccaacttgctattgttcctctcccgggtgatagcaatcaaatgccc
cgggaacaaagtaatctccttaatgagatccgaccaaatcctctcgacattgatgatgat
aatgttccattgaagttctacaagcgaagatttagagagcgaacaacttcaacatcaatg
tcaggacgtatgaagaaaatctccgaattagatgattatgatcatgaaccaggacgcgga
agaaggaactttagtcataaacaaaatcagaagtttaagcatcgcgcttttgcttcttct
aggagtgataagcactctgaggatccgtcgagaaataaaaagaaacctttggatatatct
gcttacaaggatcttatatcaacttacatgaagaacatacagttgacaatagagaataaa
cagcctatttctactgatgcatggaaaaaccttcaaggagcatcatctatgtatgaaaag
aaggctgctgatgaagctcggcctcccgaggaggtagaagaagaagaagagtctgaaact
gagatgttgttcagagaaatggacctttgtttagcttcagcatattttgaagaggagcat
tcaaaggctgaagatggtgatgaacccgcggagaagttcttcaaaaatgatggatcttgt
cagcatgtgttcaccatagacgatgagattgggattctatgccggttgtgtggatatgta
atcaccgagatcagagatgttacaccgccatttatgcgacaatcaggatttacagcgaaa
catgacagaaatgataacaagactgaaaaggatgatactgagcataagctgctggatgag
gcctgtgctgatcttgtctataatcccgcctcctatgaaactctcgtgtctgaatcaaac
gacaatgtctggggtctaatcccgagtataaagaagaaattacatgatcatcagaagaaa
gcatttgagttcctttggagaaaccttgcagggtctttgataccttcagaaatggaacca
tcaagcaagaaagttggtggttgtgtaatttctcatgctcctggtgccgggaaaactttt
cttatcatcgcgttccttgttagttacttgaagctattccccgggaagagacctttagtt
cttgcaccgaaaacaacactttatacatggtacaaggagattataaagtgggagtttccg
gtcccagtgtatcaaatacatggccgaagaacctacagagatagaatttacatgcaaaaa
gtcgggactgcttcatcaagtcttgtaccaaatggagatatcatgcatgttcttgattgc
ttggagaagatacagaagtggcatgctcaccctagtgttcttctcatgggttacacctcc
tttctatcgcttatgcgagaagactctaagtatgctcatcgtaggtacatgggtcagatt
ctgagggaaagtcccgggattttgatacttgatgaaggacacaacccgagaagcacaaag
tcaaggctgaggaaagctttaatgagggttgacacagaattcagaattttactctcagga
actttgtttcagaacaactttggtgagtatttcaacactctttgcttggcaaggccaaag
tttgttgatgaggtgcttcgagtgcttgaccctaagtataagaagaaaataaaggggcag
aataaaacgcgaacttccattgaaaaccgtgccaggaaggttttcatggacatcattgca
aggaagataaactcgagtgagacagaagaaagagctgatggcctaaacatgttgaagaac
atgacaaacaagtttattgatgtatatgaaggcggaggctcagaaaacctgcctggcctt
cagagttatactctgatgatgaagccaactcctttgcagcatgaaattcttgtgagactt
cacaaacacatgaatgtggctcgaggatttcctttagaactcgagctcatgatcaccctt
ggatcgatccatccatggttgataaaatccgctgtttgtgcaaacaagtttcttagcttg
gaggagcttcagagcctcgacgagtttaggctggaccctacaaaagggtcaaaggtgaaa
tttgtccttggactggtccagaggtctataataaggcgggagaaggttttgatcttttgc
cacaacatagcgccaatcaacctcttccttgagctttttgagagaatttacgggtggaag
aaaggccacgaggttctagtccttcaaggggatctcgagctttttgaaagaggaagggtg
atggataaattcgaggaacgtggagggccatcaaaggtgttactcgcttcaatcaatgct
tgtgctgaaggtattaccttgacagctgcctctagggtggtcttgttggactctgaatgg
aacccctcaaagcaaaagcaggccattgctcgagcatttaggcccggtcaagagaagata
gtgtatgtttatcagctattagttaatggtacattagaagaagataagcatggtagaaca
acatggaaagaatgggtttcttgtatgatatttagtgaagaacatgtggatgatccttca
aaatggcaagcggagaagatcgaagatgctttattgagagaaatcgttgaggaggatcat
gctaagtctttccatatgattatgaagaatgaaagggcttcttatgagaatcctttgaag
gtgatcactgaggaataa
DBGET
integrated database retrieval system
