Chenopodium quinoa (quinoa): 110733655
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Entry
110733655 CDS
T05764
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110733655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110733655
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110733655
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110733655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
110733655
NCBI-ProteinID:
XP_021769424
LinkDB
All DBs
Position
Unknown
AA seq
271 aa
AA seq
DB search
MSSIMEISEETVQIREVWHHNLEEEFALIREIVDYYPYVAMDSEFPGIVIRPVGTFKNIT
DFNYKTLKDNVDMLKLIQLGLTFSDGKGNLPTCGTEKYCIWQFNFREFNVGEDVYASDSI
ELLKQCGIDFAKYRAEGIDSNRFAELLMSSGIVLNDDIKWVTFHSGYDFGYLLKSLTCKD
LPETQAGFFNLINIYFPFLYDIKHLMKFCNSLHGGLNKLAELLEVKRVGIGHQAGSDSLL
TCCAFMKLKDNFFGGSTEKYAGVLYGLGEDS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgattatggagattagcgaagaaacggttcaaatcagggaggtttggcatcat
aatttagaagaagagtttgctttaattcgagaaattgttgattattatccttatgttgca
atggattctgagtttcctgggattgtaattagaccagttggaactttcaagaatattaca
gactttaattataagaccctaaaagataatgttgatatgttgaagttgattcagttgggt
ttaactttttcagatggaaaggggaatttgccaacttgtggaactgaaaagtactgtatt
tggcagtttaattttagggagtttaatgttggggaggatgtttatgctagtgattccatt
gagcttttgaagcaatgtgggattgattttgctaaatatagggcggagggtatcgattcg
aatcgatttgctgagcttcttatgtcgtctgggattgtgttgaatgatgatatcaaatgg
gttacatttcatagtgggtatgattttgggtacttgcttaagtcgttgacttgcaaggac
ttgcccgaaacgcaggccgggttttttaacttgatcaatatctatttcccttttctgtat
gatattaagcatttgatgaagttctgtaacagccttcatggtggccttaacaagcttgcc
gagttgttggaggtcaaaagagttgggattggtcaccaggctgggtcggatagtttgctc
acttgttgtgcatttatgaagttgaaggataatttcttcggtggtagcactgagaagtat
gctggtgttctgtatggcctcggcgaggacagttag
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