Chenopodium quinoa (quinoa): 110733715
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Entry
110733715 CDS
T05764
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi00040
Pentose and glucuronate interconversions
cqi01100
Metabolic pathways
Module
cqi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110733715
Enzymes [BR:
cqi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110733715
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
110733715
NCBI-ProteinID:
XP_021769493
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MYSFVVEIHMQGNSLLIGVYVLLHVFVSQLALGIRMENGSPLASPSNNISVLDCGAVGDG
LKDDSLAFSKAWEAVCAIIGETPTLTIPDGPFLLTPVSFQGPCNASSIHVQIQGKLVAPE
NPETWKNCTDNTWIRFSGIDNLILDGSGEINGKGANWWHSANLSFGDNNFDTNSTALQLL
SCNGLQLKDLTHVDSPNGHISIVSCNNATISNLHIVAPENSPNTDGIDISSSTQVQISDS
IIETGDDCIAIGSGTSQLNITGITCGPGHGISVGSLGRDGETAQVEQIHVRNCTFNGSTN
GARIKTWQGGSGYARNITFEDIPLINVENPIIIDQYYCNPGQTCAAQKSAVAIEGITYKG
FQGTSASAAAISLNCSSTVACTGITMESINITASNPSDKAFGICINAKGTEDLVVPRVPC
FVV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtactcttttgttgttgaaattcatatgcagggcaattccttgttaatcggtgtgtac
gttcttctacatgtttttgtctcccagcttgctttgggcattcgtatggaaaatggtagt
cctcttgcatcgccatcgaataatattagcgtgctagattgtggagccgttggcgatggc
ctaaaagacgatagtctcgcattttcaaaagcatgggaagctgtatgtgctattataggg
gaaactccaacccttacaataccggatggaccattcttattaactccagtttctttccaa
ggtccttgcaatgcaagcagcattcatgttcagatccaaggaaaactcgtggcacccgaa
aatcctgaaacttggaagaattgtacagataacacttggataagattttcaggcattgac
aacctcattttagatggatcaggagagatcaatggcaaaggcgcgaattggtggcacagt
gctaacctttcctttggtgataataactttgacaccaattctactgctctacaattgtta
agttgcaatggtcttcaattaaaagacctaacacatgtagacagtcccaatggacatata
tcaattgttagttgcaacaatgcaactatctcaaatcttcatattgtagctccggaaaac
agccccaacacagatggaatcgatattagttcctcgactcaagttcagataagcgattcc
attatcgaaacaggcgatgattgtatagcaatcggatcaggaacatcacagcttaacata
acaggaataacttgtggaccaggccacggtataagtgttggaagcttgggaagagatgga
gaaacggctcaagtagaacaaattcatgtaaggaattgcacttttaatggaagcacaaac
ggcgctaggatcaaaacatggcagggtggatcaggttatgcaagaaacatcacttttgaa
gatattcctctgataaacgtagaaaatccaattattattgaccaatattactgcaatcct
ggtcaaacttgtgcagctcagaagtcagctgtggcgattgaaggcattacctataaaggc
ttccaaggaacatcagcaagcgcggcagcaattagtctaaattgtagcagcacggttgct
tgtaccggcatcaccatggagtccatcaatattactgcttcgaatccttcggataaggct
tttggcatttgcataaacgctaaagggacagaagatctagttgtacctcgagtaccttgt
tttgttgtctag
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