Chenopodium quinoa (quinoa): 110733881
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Entry
110733881 CDS
T05764
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03440
Homologous recombination
cqi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110733881
03460 Fanconi anemia pathway
110733881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cqi04121
]
110733881
03036 Chromosome and associated proteins [BR:
cqi03036
]
110733881
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110733881
Ubiquitin system [BR:
cqi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110733881
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
110733881
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
110733881
FA (Fanconi anemia) pathway
Downstream FA components
110733881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
110733881
NCBI-ProteinID:
XP_021769649
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MSTWQIFSDAGDNFRWEVSPSHQPSHQQTNHHCSTPPPSLPSFHDVLLQGCSKILEDCDN
RNVVDDDIPMFRTGSGSSVVLKKSSIAKASSVLGDDFIDNFDTEQPCFKGNGFSTPNSMF
QTGSGKKVNVSSSGLLRARALLSVEESNDDFSTQGSEPAKKKFRGVDTSAFEKHSSSGKR
KFGISSMGANKDMHFSKSPFHLKSDSSGAEFGDEDFAKLIRPEMSDSICKPPAIKFNTAG
GRFISVSRDALQRARNLLSDPEMDSPSHEGDVGASMFSFIKAGDSDGSFFNKENKTDYSH
KSEQNPKIFVSPMKSSSTMKPLLETKSENLISGTNLMRKFDAEESNCKSNGKLSCPTNSL
QGKSNVPDPVLQPSMANGAGPGFHRFSKSSGVPLSDISNTIGIDSKVSAIKKGTTTELKR
LGKRSSVSPFKMPRNSKFITPLNSNLSSIPDGLSSRESEASNCRKRVCTRYPFQNSRLYV
KEFFEKPPTYPELLDHIPEEVRQITPRTSEKYTFVDGSQRFGVENFYHLLVQSGASVQHA
SKEWVTNHFKWIVWKLASYERCYSSKSMKKFLTISDVLEELKYRYEREVNHGQRSAIKRI
LEGDASPSSMLVLCVSEIEDPSTSMADKSSNSRIELTDGWYSVCAQLDLVLSKQLDAGKL
FVGQKLRICGAGLIGWNGPVSPLKASPLISLMLHINGTYRASWHERLGLCRGMCAPLAFR
CIKDNGGLIPRTLVGVTRMYPVLYRERLKSGGYIVRSEKLEASLTQLYNRRRSNIIEGLT
SDFQRGLVGSCTEDDYDNEGAKIMKMLESAAEPELLMAEMSSEQLASFSKYRATIDETRQ
GDLQRLIEKALEDAGLSARDVTPFMRVRVVGLKSRGQYKGEVQREGLITIWNPTEQQKLE
LVEGQAYAISGLIPSHSDLSTLYLQARGSSTKWKPLTTKEKESFGPFFNPRKPVSLSRMG
EVPLSSEFDTAMLVLHVGLEYISGKQKKQWVFVTDGSLCETEVSTFSLLAINFCSPCGDD
DSLSLVNYNLVGSIIGFCNLVKRTKDHVNLMWVAEATENSTYYLKYNHPYCSHLKDAFGL
VKKWQQSASSTIEKLREKILHIVGGPKVIISRS
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacttggcagatattttccgatgccggagacaatttccggtgggaagtttctcca
tcacatcaaccctcccaccagcaaaccaaccaccattgctctactcctccgccttctctt
ccttccttccacgatgttctgcttcaaggatgttcgaagattttggaggattgtgacaat
cgaaatgttgttgatgatgatattccgatgtttcgaactggatccgggagttctgttgtt
ttgaagaaatcgtcgattgcgaaagcttcttctgttcttggtgatgattttatcgataat
tttgatacagagcaaccatgttttaagggaaatgggttcagtactcctaattctatgttt
caaacgggctctgggaagaaagttaatgtatcttctagtgggcttcttagagctagagca
ttgttgagtgtcgaagaaagtaatgatgatttctctacccaagggtctgagcctgcaaag
aagaaatttcgtggtgtggacacgtctgcatttgaaaaacattcatcttcagggaagagg
aagtttgggatcagcagtatgggagccaataaggatatgcacttctcaaagtctccgttt
catttgaagagtgattcgtctggagctgagtttggtgatgaggattttgctaaacttata
cgaccagagatgtctgattctatctgcaaaccgcccgcaattaagttcaatactgctggt
ggcagattcatatcagtttctagggatgccttgcagcgagcgcgaaaccttcttagcgat
ccagagatggacagtccttcacatgagggagatgtaggtgcttccatgttttcgtttatc
aaggctggagattctgatgggagcttctttaataaggaaaataagactgattactctcat
aaatctgaacaaaatccaaagatctttgtatctccaatgaaatcatcttctactatgaag
ccattgttagaaaccaaatcagagaacttgatctcagggaccaatttaatgaggaaattc
gatgctgaggaaagtaactgcaaatcaaatggtaaactatcgtgcccgacaaatagtttg
caaggaaagtctaatgtacctgatccagttctgcagccctccatggccaatggtgctggt
ccaggattccatagattctcaaagtcatccggggtgccactatctgatatatcaaacact
ataggcattgactctaaagtctctgcaattaaaaaaggaacaaccactgagctgaagaga
cttgggaaaagaagttctgtttctccattcaaaatgccaagaaattcaaagttcatcact
cctctgaatagcaacctttcttccatccctgatggattgtccagcagggaatccgaggct
tcaaattgtcgaaaaagagtttgtacccgttacccctttcagaattcaagattgtatgtc
aaggaattttttgaaaagcctccgacctatccagaattgctggaccatattccagaggaa
gtgcggcagataacccctcgaacgtcagagaaatacacatttgttgatggatcccagcgg
tttggtgttgaaaatttctaccatctgttggttcagtctggagcttctgtgcaacatgca
tcaaaagagtgggtcacaaatcacttcaagtggattgtgtggaaacttgcaagctatgag
aggtgttattcatctaaatctatgaagaaatttttaactatttctgatgtgcttgaggaa
ttaaagtatagatatgaacgtgaagttaaccatggtcagcgttctgcaatcaaaagaatt
ctagaaggagatgcatcaccttcttccatgctggtgttatgtgtctctgagattgaggat
ccaagtacaagtatggcagataagagtagcaattctagaatagaacttactgatgggtgg
tactcagtatgtgcccagttagatcttgtgctgtcaaagcaacttgatgcggggaagtta
tttgtgggacaaaaactacggatatgtggagctggtttaattggctggaacggacctgtt
tctccgctcaaggcatcaccattaattagtttaatgctgcacattaatggaacgtacaga
gctagctggcatgaacgcttaggattatgtagaggaatgtgtgcaccattggcattcaga
tgcatcaaggataatggaggtctaatccctaggaccctagttggagttactaggatgtac
cctgtcctttacagggaaaggttaaagagtggaggctatattgtgaggtcagaaaagttg
gaggcttcactaactcagctttacaaccggaggcgctctaacattatagaaggacttaca
tcagactttcagagaggtttggttggttcttgtacagaggatgactatgacaatgaagga
gcaaagatcatgaagatgcttgagagtgctgctgaaccagaactattgatggcagaaatg
agttctgagcagctagcatcattctccaaatatcgagcaaccattgatgagacaaggcag
ggtgacttgcagaggttgattgagaaagcacttgaagacgctggattaagtgctagagac
gtcaccccatttatgcgagttagggttgttggattaaaaagtagaggacaatacaaaggt
gaagttcaaagagagggattaattacaatttggaatcctaccgaacagcagaagctagag
ctcgtagaggggcaggcttatgctatttcaggtcttataccatcgcattctgatctaagt
acgctatatttacaagctagaggttctagcaccaaatggaagcctttgactactaaagag
aaggaatcatttgggcccttctttaatcctcgcaagccagtatcattgtcaagaatgggg
gaggttcctttgtccagtgaatttgatacagccatgctggttttacatgtgggccttgag
tatatatctggtaagcaaaagaaacagtgggtgtttgttactgatggatccttgtgcgaa
acagaagtatcaacattctccttgctggctattaacttctgttcaccgtgtggtgatgac
gattccttatctctagtcaattataaccttgttggcagcataattggcttctgcaatctt
gtgaagagaactaaggatcatgtaaatcttatgtgggtagcggaagctactgaaaattcg
acatattaccttaaatacaatcatccttactgttcccatctcaaggatgcctttgggcta
gtaaagaaatggcagcagagtgcaagctcgacaatcgagaagctcagggagaagattttg
catatagttggtggtcctaaagtgattattagcaggagctga
DBGET
integrated database retrieval system
