Chenopodium quinoa (quinoa): 110734037
Help
Entry
110734037 CDS
T05764
Name
(RefSeq) uncharacterized protein LOC110734037 isoform X1
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110734037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110734037
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110734037
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110734037
Messenger RNA biogenesis [BR:
cqi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
110734037
DNA repair and recombination proteins [BR:
cqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
110734037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
110734037
NCBI-ProteinID:
XP_021769787
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MELTLKKFFGFSNFRPYQKEVIEKIMEGRDCLAVMATGSGKSLCYQVPPLIAGNTGIVVS
PLLSLMQDQVMALKQRGIQAEYLGSTQTDKTVQTKAESGFYSLLFMTPEKACAIPNSFWT
RLLKAGICLFAVDEAHCISEWGHDFRTEYKQLDKLRPILSDVPFVSLTATATDKVRLDII
KSLKMKDPYVAVGSFDRKNLFYGVKSFNRGIYFLDELVQEVSKSVATAGSTIIYCLTIKD
VEQIHQLLESAGIKAGIYHGQMGNKAREEAHRLFIRDELSVMVATIAFGMGIDKPNIRQV
IHYGCPKSLETYYQESGRCGRDGIASVCWLYYTRSDFAKSDFYCSGLQTENQRKAVVDSL
MEAQKYCMLTTCRRKFLLEHFGEMVPAENCGNCDNCTTTRRERDMSKEAYLLMACIHSCR
GNWGLNLPIDVLRGSRSKKIVDAQFDKLPLHGLGKAYSSNWWKSLGSQLISHGYLKETIS
DVYRFVSVSTKGAQYLKSAGPDHQPPLILPIIDEMCEEDEGAPGQVEGLKTLTSSECEGL
TEAEVQLYHTLLAERAKLARATGTAPYAICGEATIKKIALVRPSTRARLANIDGVNQHFV
TTYGDHFLQAIRHLSQDLNMSLDGELSIQTVSVKKVTPVQNLPKKLTPAKFEAWRMWHED
RHSIEKIANFPGRSAPIKEGTVLSYLLEAFQEGLATDWPRFCAEIELTPEMFSSILDAVT
KVGSTEKLKPIKDELPENVNYSHIKAGLTMLSCGISSPSELNPLNKANEVPEAAESSPKS
LASCLAEESCNLDHKLPKNRKDEETDFDCDMITSKRCKIDKENDRCSAMSATQSSIVEWL
KNYGDGVALHDIIQHFKDSSEETIRTLLVDLEGEFVIYQKSGVYKMF
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggagctcactctcaaaaaattttttgggttttcaaattttcggccgtatcagaaagaa
gtgattgagaaaattatggagggaagagattgtttggctgttatggcaactggtagtggc
aaatctctttgctatcaagttccccccttgattgcagggaatacaggcattgtggtcagt
cctctgttatctttgatgcaagatcaggtaatggctttaaaacaacgtggcatccaagcg
gagtacctaggttctactcaaactgataaaactgtacagacaaaagctgaatcaggcttt
tatagcttgttgttcatgaccccggagaaagcatgcgcaattcctaatagcttctggaca
agactgctaaaggctggaatttgtctctttgctgtcgatgaagcacattgcatatcagaa
tggggtcatgatttcaggacggagtacaaacaactagacaagttgcgtcctattctctca
gatgtcccattcgtgagcttgactgcaactgctacagacaaggtccggttagacataatt
aagtcattgaagatgaaggatccttatgttgctgtaggctcatttgatcgtaaaaatctc
ttctatggtgtgaaatcttttaatcgaggcatctacttcctggatgagcttgtacaagag
gtttcaaaatctgtggctactgctggatcaaccatcatttactgccttacaattaaagat
gttgaacagatacaccaactgttggaaagcgcaggaattaaggctggaatctatcatggt
caaatgggtaataaagctcgggaagaggcacatagattatttattagagatgaattgagt
gtcatggtcgccactattgcctttggcatgggaattgataagcctaacattaggcaagtg
atacattatggttgcccgaagagtttagagacatattaccaggagagtgggcgatgtggg
agagatggtatagcatctgtctgctggctctattacacaagaagtgactttgcaaaatct
gacttttattgcagtggattgcaaacagaaaatcaacgaaaagctgttgttgactcactg
atggaagcacaaaagtattgcatgctaacaacgtgtcgcaggaagttcttactggagcac
tttggtgaaatggttccagcggaaaactgtggaaattgtgacaattgcactactacccgg
agggagcgagacatgtctaaagaagcctatcttctgatggcttgtattcattcatgcagg
ggtaactggggtctcaatttgcctatagatgttcttcggggatcacggtcaaaaaaaata
gttgatgctcagtttgataagcttccactgcatggccttgggaaggcatactcttccaac
tggtggaagtcgctaggctctcaactgatttctcatggttatctaaaggagacaattagt
gacgtttacagatttgtgagtgtcagcaccaaaggagcacaatatctcaaatctgcagga
cctgaccatcagcctcctttgatcctgcctataattgatgagatgtgtgaggaagacgaa
ggtgcaccaggtcaagttgaaggcttgaaaactttgacttcctccgaatgtgaaggatta
acagaggccgaggttcaactttatcacacacttttagcagagagggcaaagcttgcaaga
gccactggaactgctccgtacgcaatctgtggtgaggccactattaaaaaaattgcattg
gttagaccatctacaagagcaagattagcgaacattgatggtgtcaaccagcattttgtc
accacatatggggatcactttcttcaagctattcggcatctttcacaagatcttaatatg
tcgttggatggggaattgagcatacaaactgtttcagtgaaaaaggtgactcctgttcaa
aaccttccaaaaaagcttacaccagcaaagtttgaagcatggaggatgtggcatgaagac
agacattccattgagaaaattgctaacttccctggtagatctgccccgattaaagaagga
actgtcctcagttatctcctcgaggcttttcaagaaggcttagctactgattggcccagg
ttttgtgctgagattgaacttacacccgagatgttctctagtatattggatgcagttaca
aaggttggctcaactgaaaaattgaagcccattaaagacgaattacctgaaaatgtaaat
tattcgcatattaaagctggtcttacaatgctaagctgtggtatctcttctccatcagag
cttaatcctctgaataaagcaaatgaagtccctgaagcagctgaatcatcaccaaaatct
ttggcatcgtgtcttgctgaagaatcttgtaacttagatcataaattgccaaagaatagg
aaggatgaagaaactgattttgattgtgatatgattacatcgaagcgttgcaaaattgat
aaagaaaatgatcgttgcagtgcaatgtcagccactcagagttctatagtagaatggctt
aaaaactatggtgacggggttgctttgcacgatattatacagcatttcaaagattcaagt
gaagaaactatacggacattgcttgttgaccttgaaggtgaatttgtgatttaccaaaag
agcggtgtatataagatgttctag
DBGET
integrated database retrieval system
