Chenopodium quinoa (quinoa): 110734345
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Entry
110734345 CDS
T05764
Name
(RefSeq) protein CHROMATIN REMODELING 8-like isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
110734345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqi03036
]
110734345
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110734345
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110734345
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
110734345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
zf-CCCH_Mcm10
AAA_34
Motif
Other DBs
NCBI-GeneID:
110734345
NCBI-ProteinID:
XP_021770157
UniProt:
A0A803LF99
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MEEEEDTILLNSLGVTSVNPEDIERNILHKARTNAESSSHGGKGTSEVEEFTDSVGNQAS
SSSQVELLKKLRAIEVEIDAVASSVEHTKSGVKNEEIDSESHGGNEEDDEGFDKAMPNSS
TLQHALAADRLKSLKKTRAELRKELSNICEDGKAVGVEEKLLKYLVREESKSKRKLKEVQ
GPNKESKKKKKVVSYQEDDEFDAVLNAASGGFVETERDELVRKGLFTPFHKLKGFERRIQ
QPGTSSLQEDRNDTADHASESVARAVRSLTDARQARPTSKLLEPKDLPRLDTPPHAFNRL
NKSFKIPKSLDSDGEKSNDSKRKKRRPLPGERWRKRIAKEEFVEEEPDVQDDLITETQDA
ENGDGGETPSVTLEGGLKIPETIFDNLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTI
QVLAFLGSLHFSNMYKPSIIVCPVTLLRQWKREARKWYRSFHVEILHDSAVDVGRKQKQS
ESDESDYESEGSFESDQDKVPSSRSAKKWDSLINRVLRSESGLLITTYEQLRILGEKLLD
IEWGYAVLDEGHRIRNPNAEVTIVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKL
GVLPVFEAEFAVPIKVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKSDVNAHLPKK
TEHVLFCSLTPEQRSVYKAFLASSEVEQIFDGNRNSLYGIDVMRKICNHPDLLEREHSSR
NPDYGNPERSGKMKVVAQVLNMWKEQGHRVLLFAQTQQMLDILENFLIANEYSYRRMDGL
TAVKQRMALIDEFNNSNDVFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERA
WRVGQTRDVTIFRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDLKDLFVLT
DEEHAGSTETSHIFGQLPEQLNVISIDKEDQQKDNCSGATTACANDTDRENSPQQDLCGN
KEKEGADNGRNTDEETNFLKNLFDTHGIHSAINHDAIMDAHDEEKMRLEEQASQVAQRAA
EALRQSRMLRSRENISVPTWTGKSGAAGAPSSVRRTFGSTVNSQLVRNSRSEDEAPKTGT
NGFVAGAASGKALSSSELLAKIRGNQASAVGDGLEHQFSLASSSANRAGSSVTRPSRASQ
NLSGVPPEVLIRNICTFIQNNGGSTSSSTIVEHFRDRIPSNDLPLFKNLLKEIAILEKNR
NGSVWVLKPEYQLSRS
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagaagacacgattttgctcaatagtttaggggttacctctgtcaatcct
gaggacattgaaagaaatatcttacacaaggctagaactaatgctgaaagcagttctcat
ggcgggaagggtacttcggaagtagaagaattcactgattccgtgggaaaccaagcttct
tcttccagccaagtggaacttttgaagaaattaagggccatagaggttgaaatagatgct
gtggcttcttctgtcgagcacacgaaaagtggggtaaagaatgaagagattgattctgag
agtcatggtggaaacgaagaggatgatgagggatttgataaggccatgcctaatagttcc
acccttcagcatgctttggctgctgatcgattgaaaagcctgaaaaagacaagggctgaa
cttcgaaaagagttatcaaatatatgtgaagatggcaaagctgttggggttgaggaaaag
ttgttgaagtatttggtcagggaagagtctaagtcaaagcggaagttgaaagaggtacag
ggccctaacaaagagtccaaaaagaagaagaaggttgtctcataccaagaggatgatgaa
tttgatgctgttctaaatgctgcatctggaggatttgttgaaacggaaagggatgagctt
gtgcgaaaaggactttttacgccttttcataaacttaagggctttgaacgccgaatacag
caaccagggacatcaagcctacaggaggacaggaatgacacagctgaccatgcttctgag
agtgttgccagggcagttcggtcactaacagatgctcggcaagctcgtccaacgtctaag
ctgcttgagcctaaagatttgccaagacttgatacaccacctcatgcttttaatagacta
aataagtcttttaaaattcctaaaagtttagacagtgatggggaaaagagtaatgattca
aaaaggaagaagagaaggcctttgcctggtgaaagatggcgcaaacgcattgctaaggag
gagtttgtggaagaagaacctgatgtacaggatgacttaatcacagaaacccaggatgct
gagaatggagatggtggcgagactccatctgtgacactcgaaggtggattaaaaatccct
gaaacaatttttgacaacctgtttgattatcaaaaagttggggttcaatggctgtgggag
ctgcattgtcaaagagctggagggattattggggatgagatgggtcttggcaagaccatt
caggtgttagcatttcttgggtcattgcattttagtaatatgtacaaaccaagcattatt
gtctgccctgtcacactgttaaggcaatggaagagagaagcccgaaaatggtaccgtagc
tttcatgttgagatacttcatgattctgctgttgatgttggtcgaaaacaaaagcaatct
gaatctgatgagagtgattatgaaagtgaagggtcatttgaaagtgatcaggataaagtt
ccctcctcaagaagtgcaaagaagtgggattccttgattaatcgggttttgagatcagag
tctggattgcttattacaacatacgaacaacttcgtatactgggggagaaactactggac
attgaatggggttatgcagtacttgatgaaggtcaccgtattaggaatcctaatgcagaa
gttactattgtgtgcaagcagctgcagacagttcatcgtatcataatgactggtgcacca
attcagaataaactgtcggaattgtggtctttgtttgattttgtcttccctggaaaatta
ggagtcttacctgtttttgaggcagagttcgctgtgcccataaaagtcgggggttatgct
aatgcatctccattgcaagtgtccacagcttacaggtgtgcagttgtcttgcgtgatcta
atcatgccttatctcttgcgtcgtatgaagtctgatgtgaatgcccatcttccaaagaag
actgaacatgtccttttctgcagtctgactcctgagcagcgctctgtttataaagctttc
ctagccagctctgaggtggagcaaatatttgatggaaatagaaattctctctatggtatt
gatgtgatgcgtaagatatgtaaccatcctgatctccttgaaagagagcattcttcacgt
aatccagactatgggaatcctgaacgcagtgggaagatgaaggttgttgctcaagtactg
aatatgtggaaagaacagggtcatcgtgttcttcttttcgcacaaactcagcagatgctt
gatatccttgaaaattttctgattgccaatgagtatagctacaggagaatggatggtctt
accgcagttaaacagaggatggcattaattgatgaatttaataattcaaatgatgtattt
attttcatactcacaaccaaagttggaggtttagggacaaatcttactggggcaaacagg
gtgataatttttgatccagattggaatccatcaacagatatgcaggccagggagcgtgct
tggcgtgttggtcagacacgtgatgtaaccatttttaggttaatcacacgtggtactata
gaggagaaagtgtatcataggcagatatacaaacattttctgaccaataagatcttgaaa
aacccgcagcagcgaagattctttaaagcaagagatttgaaggatctttttgttttaact
gatgaagaacatgctggctcaactgagacttcacatatttttggtcaattacctgagcaa
ttgaatgttattagcattgataaagaagaccagcaaaaagataattgctctggagcaaca
actgcatgtgcaaatgacacagacagagaaaatagcccgcaacaggatttatgtggaaat
aaagagaaagaaggtgctgacaatggtcgaaacactgacgaagaaacaaatttcttaaag
aatctttttgacacacatgggatacatagtgctataaatcatgatgctatcatggatgcc
catgatgaggaaaaaatgaggctcgaggagcaggcttcccaagttgcacagagagcagca
gaagcacttcgtcagtcgcgaatgcttagaagcagagagaacatatctgttccaacatgg
acaggaaaatctggggctgccggtgcaccttcatctgttcgccggacatttgggtcaaca
gtgaactctcagttggtaagaaactccagatcagaagatgaggcacccaaaactggtaca
aatggatttgttgcaggagctgcttctggtaaagcattgtcttcatctgagttgctcgcc
aaaattcgagggaaccaggctagtgcagtcggtgatgggcttgaacatcagtttagtttg
gcttccagctctgctaacagggcaggttccagtgtaaccaggccttctcgggcatctcag
aatctcagtggggtcccaccagaagttttaatccgaaatatctgcactttcatccaaaat
aatggtgggagcaccagttcttccacaatagtggaacattttagagatagaattccttca
aatgatttacccttgttcaaaaatcttttgaaagaaattgctatactagagaaaaatcgg
aatggttcagtctgggttctaaagcctgaatatcagttgtcacgttcttga
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integrated database retrieval system
