Chenopodium quinoa (quinoa): 110734682
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Entry
110734682 CDS
T05764
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
cqi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110734682
03015 mRNA surveillance pathway
110734682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110734682
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110734682
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110734682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
IFT52_central
Motif
Other DBs
NCBI-GeneID:
110734682
NCBI-ProteinID:
XP_021770513
UniProt:
A0A803N9R4
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MADSTETTIKTTSTNEASESSSATSAPPETSSDTTIPPEIKPAEVKRSWGDEVDDEELAV
DQLSIKENQDLDEPEDSNIKAVTTGDTPYTSAKKFEDLNLSEELLKGLYVEMRFERPSKV
QSITLPMILTPPHRNLIAQAHNGSGKTTCFVLGMLSRVDPKQQAPQALCICPTRELVIQN
LEVLQKMGKYTGITAERAIPENLDNPTHTPINKRPPITTQVIIGTPGTIKKWISLRKLSL
SYMKILVFDEADHMLAADGFKDDSLRIMSDIKKSAPKCQVLLFSATFSELVKQFVTKAIS
DYNQLFVKKEELSLESVKQFKVRCPGELEKIQVVREKILELGQKVGQTIIFVRTRNSASY
LHKALVDLGYEVTTIQGALIHEDRDKIVKEFKDGLTKVLISTDVLARGFDQSQVNLVVNY
DLPVKYDDQKEPDCEVYLHRVGRAGRFGRKGAVFNLICNETDNMIMEKIENHFGTKVVEV
PDFRSEADFEAALKEAGLV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcaacagaaaccaccatcaaaacaacatccacaaatgaagcgtcggaaagt
tcttccgccacttcagctccgccggaaacctcttccgacaccacaatcccgccggaaatc
aagccggcagaagttaaacgttcttggggcgacgaagttgacgacgaagaattagccgtc
gatcagctttcaatcaaagagaaccaagacttggatgagcctgaagattccaacattaaa
gcggttacaacgggagatacaccgtatacatcagcgaaaaaatttgaagatttgaatttg
tctgaggaattactcaagggtttgtatgttgagatgcgattcgaaaggccgagtaaagtt
caatctattactttgcctatgattttgacaccaccgcacagaaatttgattgctcaagct
cataatggatctggaaaaactacctgctttgttttgggaatgttgagtcgtgttgatcct
aagcagcaagctcctcaagctctttgtatttgccctaccagagaattggttattcagaac
ttagaggtgctgcaaaagatggggaagtataccggaattactgcagagagagcaatccct
gaaaatttggataatccaacacatactccgattaataagcggcctccaataacaacccaa
gtgataattgggacgcctggtacaattaaaaagtggatttcattaagaaaattgtcttta
tcttatatgaagatcctggtgtttgatgaagctgatcacatgttagctgcggatggcttc
aaggatgattctctaagaattatgtctgatatcaagaaaagtgctcctaaatgtcaggtg
ttgctgttttctgccacttttagtgaattggtgaagcagtttgttacaaaagcaatttca
gattacaatcagctttttgtcaagaaggaagaactatcgctggagtcagtgaagcagttt
aaggttcgctgcccgggtgaactggaaaaaattcaggttgttcgtgagaaaatattggag
ttgggtcaaaaggttggccagaccattatatttgtgcgtacaagaaacagtgccagctat
cttcataaggcgcttgtggatttgggttacgaagttactacaattcaaggtgctcttatt
cacgaagacagagataaaatagtgaaagagttcaaagacgggttaactaaagtgctgata
tccactgatgttcttgctagaggctttgaccagtcacaggtcaacttggtggttaactat
gatcttccagtgaaatatgatgatcagaaagagcctgactgtgaggtatatttgcataga
gtaggacgagcaggacgttttgggcgtaaaggcgcagtattcaatttgatttgtaatgaa
acagacaatatgattatggagaagattgagaatcattttggaactaaagtagttgaggtg
cctgattttagaagtgaggcagactttgaagcagctcttaaggaagctggtttagtttga
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