Chenopodium quinoa (quinoa): 110735063
Help
Entry
110735063 CDS
T05764
Name
(RefSeq) pre-mRNA-splicing factor SYF1-like
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110735063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110735063
03041 Spliceosome [BR:
cqi03041
]
110735063
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110735063
Spliceosome [BR:
cqi03041
]
Complex B
Other components
Prp19-related factors
110735063
Complex C
110735063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
Suf
Mad3_BUB1_I
TPR_19
TPR_15
NRDE-2
Motif
Other DBs
NCBI-GeneID:
110735063
NCBI-ProteinID:
XP_021770886
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MAIARELYPSEDDLPYEEEILRNPFSLRLWWRYLVARTSSPFKKRAVIYERALKALPGSY
KLWYAYLRERLELVRNLPITHSQYETLDNTFERALVTMHKMPRIWIMYLQTLIVQKLVTR
TRRTFDRALCALPVTQHDRIWEPYLIFVSQKGIPIETSLRVYRRYLKYDPSHIEEFIEFL
VNSERWQEASERLAGVLNDDQFFSIKGKTKHRLWLELCELLTKHATEVSGLNVDAIIRGG
IRKFTDEVGRLWTSLADYYIRRKLPEKARDVFEEGMMTVVTVRDFSVIFDAYSQFEESML
AYKMESLDLSDEEGEDGGGDEEEEEVDIRGDVELSMGKFEKKILKGFWLHDDNDVDLRLA
RLEHLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTRQILTYTEAVRTVDPMKAVG
KPHTLWVAFAKLYESHKDLANARVIFDKAVQVNYKAVDHLASIWCEWAEMELRHKNFKGA
LDLMRRATAVPSVEVKRRVAADGYEPVQMKLHKSLKLWTFYVDLEESLGTLESTRAVYES
ILDIRIATPQIIINYAMLLEEHKYFEDAFRVYERGVKIFKYPHVKEIWVTYLSKFVKRYG
KTKLERARELFENAVETAPGECVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPASEKL
SMYEIYIARAAEMFGVPKTREIYEQAIQSGLPDKDVITMCMKYAELEKSLGEVDRARAVY
LYASTFADPRIVPDFWNQWHEFEVQHGNEDTFREMLRIKRSIVSSFSQTHFILPELLMQK
DEVSLDAIEKAGVPADEMAALERQLAPVDNDVLAKDKARTVGFVSAGVESQSDAGKRNVN
QEEIELPEESDDDEEDVEKVEIAQKDVPSAVFGGLAKKRDDPEKAEDGEEVKGADAPLGA
LERMKRRKKD
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggctatagctcgagaattgtacccttccgaagacgaccttccttacgaagaagaaatc
ctgcgcaaccccttcagcctccgtctatggtggcgctacctcgtcgcaagaacctcttct
cctttcaagaaacgcgcagtcatctacgaacgagctctcaaagctttacctggaagctac
aaactctggtatgcttatcttcgtgaacgccttgaacttgttcgtaatcttcctattaca
cattctcagtatgaaaccctagataatacttttgaacgtgctttggttactatgcataag
atgcccagaatttggattatgtatttacaaaccctaattgttcagaaattggttactcgt
actcgtcgtactttcgatcgggctctttgtgctttgcctgttactcagcatgatcgaatt
tgggaaccctatttgatttttgttagtcagaaggggattccgatcgagacttcgcttagg
gtttataggaggtatttgaagtatgacccatctcatattgaggaatttattgagtttttg
gtgaattcggagcgctggcaggaggcttccgagaggttggctggggttttgaatgatgat
caattcttttcgattaaggggaagacgaagcatcggctttggcttgagttgtgtgaattg
ttgactaagcatgctaccgaggtttctgggttgaatgtggatgcgataattaggggtggg
attaggaaatttacggatgaggtggggcggttgtggacttcgttggcggattattatatc
aggaggaagttgccggagaaggctagggatgtgtttgaggagggtatgatgacggtggtg
actgtcagggattttagtgtgattttcgatgcttattcacagtttgaggagagtatgctg
gcatataaaatggagagtttggatttgagtgatgaagagggagaggatggtggtggggat
gaggaagaggaggaggttgatattaggggggatgttgaactctctatgggaaagtttgag
aagaagatcttaaagggtttttggctgcacgatgataatgatgtggatttgcggctcgct
aggttggagcatttgatggatagacgtcctgagctagctaatagtgttcttcttcgtcaa
aacccacataatgtggagcaatggcatcgaagagtgaagctctttgagggtaacccaact
aggcagatattgacctatactgaggcggtcaggactgtggatcctatgaaggcagtagga
aagcctcacactttgtgggtagcttttgctaagctgtatgaaagccacaaagatcttgct
aatgctagggttatatttgacaaagcagtacaagtgaattataaagcagtggatcatctt
gctagtatatggtgtgaatgggccgagatggagttaaggcacaaaaactttaaaggagca
ctggacctgatgcggcgtgcaacagcagtgccctctgtcgaagttaagcgtcgagttgct
gcggatggttatgagcctgtgcagatgaagctgcacaaatctttaaaattgtggacattc
tatgtagatttggaggaaagccttggtactttggagtccacccgtgctgtgtatgagagc
atattggatataagaattgctactccccaaattattataaactatgcaatgcttctggag
gagcataaatattttgaagatgcatttagggtgtatgaaagaggtgtgaagatcttcaaa
tatcctcatgtgaaagagatatgggttacatatttatccaagtttgttaagagatatggg
aagactaagttggaacgagccagagagctctttgagaatgctgttgaaacggcacctggg
gaatgtgtaaaacctttatacctgcaatatgctaagttggaggaggactatggcttagca
aagcgtgcaatgaaggtttatgatcaagctactaaagctgttccagctagtgagaagttg
agcatgtatgagatctacatagctcgtgcagcagaaatgtttggtgtgccaaaaaccagg
gagatatatgagcaagcaattcaatctggtcttcctgacaaagatgtgataaccatgtgc
atgaagtatgctgagcttgagaaaagcctcggagaggttgaccgtgctcgtgcagtttac
ttatatgcctccacgtttgcagatccaagaattgttcctgatttctggaatcagtggcat
gaatttgaggtccaacatggaaatgaagacaccttcagagaaatgctccgcataaaacgt
agtattgtttctagtttcagccagacccatttcatccttcctgaattactgatgcaaaaa
gatgaggtcagccttgatgcaattgaaaaagctggggttcccgctgatgagatggctgct
cttgaaaggcagttggctcctgtagacaatgatgttctagctaaggataaagcaaggact
gttggttttgtcagtgctggagttgaatctcaaagtgacgctggcaaaagaaatgtaaac
caggaggagattgaactaccagaggagagtgatgatgatgaggaagatgtggaaaaggtc
gagattgctcaaaaggatgtaccaagtgctgtttttggtggcttggctaagaagcgggat
gaccctgagaaagctgaagatggggaggaggtgaaaggggctgatgctcctctaggtgct
cttgaaagaatgaagcgtagaaagaaagattag
DBGET
integrated database retrieval system
