Chenopodium quinoa (quinoa): 110735090
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Entry
110735090 CDS
T05764
Name
(RefSeq) sister chromatid cohesion protein SCC2-like isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqi03036
]
110735090
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
110735090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
HEAT
PHD_2
Nop52
zf-PHD-like
zf-RING_11
PHD_3
Motif
Other DBs
NCBI-GeneID:
110735090
NCBI-ProteinID:
XP_021770922
LinkDB
All DBs
Position
Unknown
AA seq
1769 aa
AA seq
DB search
MSTNFSDWTQRGVTLSNTLHSEVAPCLPLPSLPPFCGASDEQLRLFDDHLSRPLNRRDIL
AQAPKIADLLLHTDVSYLNLKNDASSGSGSTMAPMDLCEEVLRCNRDAFECTLPGPLEER
ISNVESDRNIHEKNEHVSCQVDGVHEERHMDRHAHVVDDTPSSSKKTRAKKKGTQGVSSS
ALPDFSEQRDAMIGRFCDFLEDFCSRAEIPGEERDESEWLMLPTSDIRMVVKEILSIREE
KLVHRVPVDFLVRLLTVLDHQIHRAEGLSIDECQNSDSDVSSILCALESIHAALAVMAFN
DMPKQLYKEEIIERILEFTRRQVMDVISAYDPSYRALHRPGDNRVAEGEDDPDIEAEFGS
ASKKRRITKSIKVKRTVANRIPAAVNTVFQKLCTILGLLKDLLLVERLSDSCILQLVKTC
LSTFLVDNIQLLQMKAMSLISGVFYSYTQHRSYVVDEVIQLLWKLPFSKRAARAYHLPDE
EQKQIQMITALLLQLVLHSANLPEALRQTSSISAIFETTIETNYLVQCNEAATEACVSFW
THVLERLTSKSQEASEVKVIMENIVVDLLTTLNLPEYPAASLILEVLCVLLLQNAGPKSK
DISIRSLAIDILGTIAARLKHESVLCHSDNNWIVQELLGRESINENEQTGTCSVCLDGVV
EKALVICQGCQRPFHPDCVGVREHDISTRGWQCPCCLCKKQLIVLQSYCKSQIKDDSKNN
HNRSENLPDESASKMEIVQQMLLNYLEEMGSSDDLHLFARWLYLCLWYKDDPKNQQQFSY
RLARLKSKAVIRDSGALSSTLTRDSIKKITLCLGQNNSFSRGFDTILGMLLVSLRDNSPV
IRAKALRAVSIIVEADPDVLRDKRVQLAVEGRFCDSAISVREAALELVGRHIASHPDVGL
QYFEKVAERIKDTGVSVRKRAIKIIRDMCTSNVEFVESAPACIEIISRISDEESSIQDLV
CKTFYEFWFEEPAGRQYFGDDSSVPLEVARKTEQIVDMLRKMPNHQPLVTIIKRNLALDF
LPQSKGTGANPVLLATVHKRCEMMCKFSLERILQVEEMNSEEGELRILPYVTVLHAFCVV
DPSLCAPASNPSQFVVTLQPYLKNQVDNRVMAQLLESVIFIIDAVLPLLRKLPQSVVEEL
EQDLKQMIVRHSFLTVVHACIKCLCSLNKIAGGKGARLIQFLIQVFEKRLDALGVDNKQQ
VGRSLFCLGLLIRYGSTLLRESTEGVDVGSSISLFKKYLLADDFGIKVRALQALGFILIA
RPECMLEKDTGKILSATLSSSCDARLKLQALQNMYDYLLDAESQLGSDTVEDNVVDCSHD
GGSVVPVAAGAGDTNICGGIVQLYWNHILERCLDTNDQIRQSGLKIVEVALRQGLVHPIT
CVPYLIALETDPLEVNSKLAHHLLMNMNEKYPAFFESRLGDGLQLSFNFIRSMNENSVNP
SSKIHFNVAENKGKHEDASFANARIGVSRIYKLIRGNRVSRNKFMSSVIRKFDNPSWSET
VVSFLMYCTEILALLPFTTPDEPLYLIYTINRVIQVRSGTLEAGLKAFSSHFSQRSSQKV
LTENGSVLQELPFGSLLASSVSFELNGQVEVPEDGHFHSTVNEETVHTRPAGPCVLAEDD
QQRIQAVCLAATALQLLLKLKRHLKIMYNLDDVRCQAFSPADPPKSGEVLSRQNIPFSIG
VINVDMPSTSEELTQRYQEFKNALREDTVDYSAYTANIKRKRPTSKRGGKASRMISREDE
DEDDNEDWTGGRRNQSGRQSNGVRASRRL
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaatttcagcgattggactcaaagaggcgtcactctctccaacactctacac
tccgaggttgcgccttgcttacctctgccgtctcttccgccgttttgcggtgcttccgac
gagcagcttcggctattcgatgatcacctctctcgcccgctaaaccgccgtgatatcctt
gctcaagctccgaaaatcgccgatctcttgcttcatactgacgtctcttacttgaatctt
aaaaatgatgcgagttcaggttctggttctacaatggcgcctatggatctttgcgaggag
gttttacgatgcaatcgtgacgccttcgagtgtacacttccaggtcctcttgaagagcga
atctctaatgtggagtctgatcgcaacattcatgagaagaatgagcatgtatcctgtcaa
gttgatggagtccatgaagaaagacacatggaccgtcatgctcatgttgttgatgataca
ccttcatcatctaaaaaaacaagagctaagaagaaaggaacccagggagtgtcatcatct
gctttgccagatttcagtgaacaaagagatgctatgatcgggcgattctgtgattttttg
gaggacttttgtagtagggctgagattcctggtgaagagcgagatgaatcggagtggtta
atgttacccacctctgacattcgtatggtagtgaaggagatattgtctatcagagaagaa
aaattggtacatcgagttcctgttgattttcttgtgagactattaacggttttagaccat
cagattcatcgcgctgaaggcctatcaattgatgaatgtcaaaattcagattctgatgtt
tcatcgattctctgtgctttggagtctattcatgctgctctggctgtaatggcttttaat
gacatgccaaagcaactatataaggaagagattattgagagaattcttgagttcaccaga
cgtcaggtcatggacgtgatatcagcttatgatccatcatatcgcgctttgcatagacct
ggtgataacagagttgctgaaggggaagatgatccagatatcgaggctgagtttggttct
gcaagcaaaaaacggcgtataactaagagtataaaagtaaaaagaactgtggctaacagg
attccagctgctgtgaacactgtgtttcaaaagctttgtactatccttggtcttctaaag
gacctcttgctagttgaacgcctctcagacagctgtatcttgcagcttgtgaaaacgtgt
ttgtcaacatttttggttgacaatattcaactcttgcaaatgaaggctatgagcctgatc
agtggggtattctattcatacactcagcataggagctatgttgttgatgaagttattcaa
cttctatggaagcttccattctcaaaaagagctgccagagcatatcatttacctgatgaa
gagcagaagcagattcaaatgattactgctttactgcttcagttagttctccatagtgct
aatcttcctgaagccttgaggcaaacatcaagtatcagtgccatctttgaaactactatt
gaaacaaactacctggttcaatgcaatgaggcagccacagaggcatgcgtttcattttgg
actcatgtacttgagcgacttacaagtaaaagtcaagaggcatccgaagtgaaggtgata
atggagaatattgtggttgatctgctaactacattgaatctgccagagtaccctgctgct
tccctcattttagaagttctctgtgtcttgttgcttcagaatgctggtccaaaatcaaaa
gatatttctatacgctcattggcgattgatattcttggtacaattgctgcacggttaaag
catgagtctgttctttgccatagtgataacaattggatagttcaggagctgttaggtagg
gaaagtataaatgagaatgaacagacaggtacttgctctgtttgcttagatggagtagtc
gaaaaagctctagtgatatgtcaaggctgtcagagaccatttcatcctgattgtgtgggg
gtcagagaacatgacatctctacgcgtggttggcagtgcccttgctgtctctgtaaaaag
caacttatagtgttacaatcatactgcaaatctcagatcaaggatgatagcaaaaacaat
cataatagatcagaaaatttgcctgatgagtctgcttcaaagatggagattgttcaacag
atgcttcttaattaccttgaagaaatgggctcatctgatgatcttcatctttttgctcgt
tggttgtatctctgcctctggtacaaagatgatccaaaaaatcagcagcagttcagctat
cgccttgccagattgaaatccaaagcagttattcgtgattcaggggccttgtcatcgacg
ttaaccagagattccattaaaaagataactttgtgtcttggacagaataattcattttcc
agaggatttgatactattcttggcatgcttttggttagtctacgagacaattcacctgta
attagggctaaggcattgcgtgctgttagtataattgtagaggccgatcctgatgtcttg
cgtgataagcgtgttcaacttgccgttgaaggaaggttctgtgattctgcaatatctgtt
agagaggctgctttggaacttgttggaaggcatatcgcatctcatccagatgttgggttg
caatattttgaaaaggttgcggagagaattaaggatactggggtaagtgttcggaaacgg
gcgatcaaaataatccgagatatgtgtacatcaaatgttgagtttgtggaatctgcacct
gcttgcattgagatcatttcccgtataagtgatgaagaatcaagtattcaggatcttgtg
tgcaaaacattttatgaattctggtttgaagaacctgctgggagacagtactttggagat
gatagttctgtgccgttagaggtggctagaaagactgaacagatagttgacatgttaagg
aagatgcctaatcatcaaccccttgtcactattatcaaacgcaatttggctcttgatttt
ttgcctcagtcgaagggaaccggggctaatcctgtattactggcgacagtgcacaagcgt
tgtgaaatgatgtgcaaattttcacttgaaagaattttacaggtagaggaaatgaactct
gaagaaggggagttgcggatacttccttatgtgacggttttgcatgccttttgtgtcgtg
gatccgtcactctgtgcacctgcctccaatccttcccagtttgttgtcacactgcagcca
tatcttaagaatcaggttgataatcgagttatggcccagcttttggaaagtgttatattt
ataattgatgctgttcttcctttactgcgtaagttgcctcaaagtgttgttgaagaactc
gagcaggatctgaagcagatgattgttcgtcattcctttttgactgttgtacatgcttgc
atcaagtgtctttgctctttgaataaaattgctggtggaaagggagctaggttaattcag
tttctgattcaggtgttcgaaaagcgtttggatgctcttggtgttgataacaaacagcag
gttggcaggtcactgttttgtcttgggcttctgattcgctatggtagcaccctgttaagg
gaatctactgaaggtgtcgatgttggtagcagtatcagtttatttaagaagtatcttcta
gctgatgattttggtataaaggtcagagctctgcaggcactgggatttattttgattgct
agacctgaatgcatgttggagaaggatactggaaaaattttatctgcaacgctgtcttcc
agctgtgatgctcgtctgaagctgcaagctctgcagaatatgtatgattatctccttgat
gctgaaagtcagttgggctcagatacagttgaagataatgtggttgactgctcccacgat
ggtggttctgtggtgcctgttgctgcaggtgctggtgatacaaacatttgtggtggaata
gtgcaactttattggaaccatatcttggaaagatgcttggacacaaatgaccaaattcgc
caatctggcctgaagatcgtggaagttgctctgcgccaaggtcttgtacacccaattact
tgtgttccgtacctcattgctctggaaacagatcctttggaggtgaactcaaagttggca
caccatctgctaatgaatatgaatgagaagtatccagctttctttgagagccgccttggt
gatggactgcagttgtcatttaattttatacgatcaatgaatgagaattctgtaaatcca
agttctaaaatccacttcaatgttgctgaaaacaagggaaaacatgaggatgcatcgttt
gcaaatgcgagaataggagtttctcgtatatacaagcttatacggggaaaccgtgtttct
agaaataagttcatgtcttcagttattcgcaagtttgataatccaagctggagtgaaaca
gttgtctctttcttgatgtactgtacggaaatccttgctttgctccctttcacaacccct
gatgagcccctttacttgatttacaccataaacagagtgattcaagttagatctgggaca
ctggaagcaggtctaaaagctttcagttcccatttctcccagcgaagttcgcaaaaggtc
ctgacagaaaatgggagtgttttgcaagagttaccttttgggtctctcttggcatcttct
gtatcttttgagttaaatggacaagttgaggttcctgaagatgggcattttcattctacg
gtgaatgaagaaactgtgcacacaagacctgctggaccttgtgtccttgcagaagatgat
cagcagagaatacaggctgtctgtcttgcagctacggcacttcagcttctcttaaagttg
aagaggcacttgaagattatgtacaatttggatgatgttcgatgccaagcattttcacct
gccgatcctcccaaatctggagaggtcctttccagacagaatattccttttagcattggt
gtcataaacgttgatatgccttcgacgtctgaagagttgacccagagatatcaggaattc
aagaatgcactgagggaagatactgttgactactcagcctacacagcaaacattaaaagg
aaacgcccaacctccaaaagaggaggtaaagcaagccgaatgataagtagggaggatgaa
gatgaagatgataatgaagattggactggagggcggaggaatcaaagtggccgacaaagc
aatggtgtaagagcaagcaggcggttgtag
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integrated database retrieval system
