Chenopodium quinoa (quinoa): 110736395
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Entry
110736395 CDS
T05764
Name
(RefSeq) endoribonuclease Dicer homolog 2-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqi03036
]
110736395
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110736395
microRNA pathway
RISC loading complex
110736395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Helicase_C
DEAD
Dicer_dimer
ResIII
PAZ
Cas3-like_C_2
SWI2_SNF2
dsrm
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
110736395
NCBI-ProteinID:
XP_021772298
LinkDB
All DBs
Position
Unknown
AA seq
1397 aa
AA seq
DB search
MEAVSMEICGTQSDSSAALSFARSYQLDALEKAMKQNTIVFLETGSGKTLIAVMLLRSYA
YFLRRPTQSNIAVFLVPTVVLVKQQAEVIELHTDLKVGKYWGDMGVDFWDAAIWQKQLDE
HEVIVMTPKILLDALSHTYIKLDKIKVLIFDECHNARGNHPYARIMKDFYHPQMHTNDVP
RIFGMTASPIKAKAKGASDSNGYWKDISALENLMHSKVYTCSSEVVLAEYVPIPNAKAQF
YNEDGPNTLQTSLINGLNSLREKHISAVRNLGAEESTELSTCNKLKKLTNTFQFCLDELG
LWAAIKATEIVSCDETDIFSWGKLDVRGETTIKAFNSDVLNMLAPHNPSGCNWSISDIKA
NLDSRIISSKLLCLVESLLRYRSLRDLRCIIFVERVVTAMVFEAILDRLLSQTSGWKARY
IAGNQSALKCQSRKEQNNLVDEFRRGAVNILVATSILEEGLDVQSCNLVVRFDPSSNICS
FIQSRGRARMQNSDFLLMVKKGDQDELSRMKNYLYSGDVMRKESLSHASLPCQPVEFNEF
DGISYFVPSTGAVVTLSSSVSLIYFYCSRLPSDGYFKPAPRCTIDEALEICTLQFPNCCP
VQSVTVKGNIKILKKLACLEACKLLHEKGALTDSLVPDIVVEEGLMKDIEREPYDEDQAR
YIPPEIVGDGPRYSDTYHSYLMELKLDFHSDIPVHDIIVVFKSELASDVGNMQFDMEVDW
GNMSVDIKYAGKINLSDEQVTLCRQYQAAVFRVLRDRNFDKLVESLKGLYEWEKNVDVPV
SHYDYILLPRQWLHRSSLIDLECISSASFLRDVVQGSFSNCNKCKCAHQDDVYTKNGFLH
RSVLENCLVCTPHNGYIYSISGILDGMNGNSYLSLSDGTLKTYKSYYKMRHGIDLKYENQ
ALLCGRQVFRLKNYFLRCQQRREKEPSGASVELPPELCLIIMSPISVATIYTYSFLPSIM
HQVEALLLSANLRGIILDHCMQNVFIPATKVLEAITTKHCQEKFHLESLETLGDSFLKYA
VCQQLFKTQQNNHEGLLSIKKDRIISNAALSKLGCQRKIPGFIRNDSFDPKHWIIPGDPI
DCRLNKEFISNTYKVYNGGIRKIKSKRVADVVEALIGAFLSSGGQVPALMFMNWLGIEVE
LSCITYQRNIPVNPRLLVNITHLESILNYSFKDPSLVVEALTHGSYMLPEIPRCYQRLEF
LGDAVLDHLITIHLYSKYPDMSPGLLTDLRSASVNNECYALSAIRAGLHKHILHASQILY
KQMGAAVASFQHLSLESTFGWESETNYPKVLADIIESLAGAIFVDSGFNKEAVFKSISPL
LEPLITPETLKLNPVSELNYICQKRHYAMRKYRTCENGVASITLEVEANGVVHKHTCTAS
DKKMAKKIACKAILKSL
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagtgagtatggagatttgtgggacccaaagtgactcgtctgccgctctttca
tttgcaagaagctaccagcttgatgctttggagaaagccatgaagcagaatactattgtg
ttcttggagaccggttcaggaaagacattgattgcggtcatgcttcttcgtagttatgca
tatttccttcgtcggcctacacagtccaatattgcagtcttcttagtacctactgttgtt
ttggttaaacaacaagctgaagttattgagctgcatactgacttaaaagttggcaagtat
tggggagacatgggtgttgatttttgggatgctgctatttggcagaaacagctggatgaa
catgaggtcattgtgatgacaccaaagatcctgcttgatgctttgagtcatacttacatc
aaactggacaagataaaagtgctaatatttgatgaatgccacaatgccaggggaaatcat
ccctatgctcgcatcatgaaggacttctatcatcctcaaatgcatactaatgacgtcccc
agaatttttggcatgactgcttctcctatcaaagcgaaagctaaaggtgcatccgactca
aatggttactggaaagatattagtgccctggaaaacctcatgcattctaaggtctatacc
tgtagtagcgaggtagtcttggctgagtatgttcctatcccaaatgctaaggctcagttt
tacaatgaggatggtccaaatacattgcaaacgagtctgatcaatggcttgaactcgctg
agagaaaagcatatatctgctgttagaaatttgggtgctgaagaatcaactgaactatct
acatgtaacaaattaaagaagctgaccaatactttccagttctgtttggatgagcttggt
ctttgggcagcaataaaggctacagaaattgtgtcttgtgatgaaaccgacattttcagc
tggggtaaattggatgttcgcggagagacgactataaaagcatttaattctgatgtgctt
aatatgttagcaccccacaacccatctggctgcaattggtcaatctccgatataaaggca
aatttggattccaggattatatcttcaaaattattgtgtctagtggaatctctccttcgt
tataggagtttgagagatttgaggtgtataatttttgtcgaaagggtagttactgcaatg
gtttttgaggctatattggatcgattactttctcaaacaagtggctggaaggcaagatac
attgctggaaatcagtctgcactaaagtgccaaagcaggaaggagcagaacaatcttgtt
gatgaatttcgccgaggggctgtgaacattcttgttgctacctccattctagaagagggt
ttagatgtccaaagttgcaacttggttgtccgttttgatccgtcatccaacatttgcagt
ttcattcagtctagaggtcgtgctaggatgcaaaattctgatttcttgctgatggtgaaa
aaaggtgatcaagatgagctatctcgcatgaaaaactatctttactctggtgatgtgatg
cgcaaggaaagtttgagccatgcttcgcttccttgtcaacctgtagaattcaatgaattt
gatgggatctcctattttgtaccgagcacaggagcagttgttacactgagttctagtgtg
agcttgatatacttttactgctcacgtctcccttctgatggatactttaaacctgctcct
cgctgcaccattgatgaggctttggagatctgtacactacaatttccgaattgttgtcca
gtgcagtcagttactgtgaaaggcaatatcaaaattttgaagaaacttgcttgcctggaa
gcatgcaagttgctgcatgagaagggtgctttgacagattcacttgttcctgatattgtt
gtagaagagggtcttatgaaagacattgagcgtgaaccatatgacgaggaccaagcaaga
tacatcccaccagaaattgtcggtgatggaccacgttattcggacacataccacagctac
ttaatggaattgaagctggactttcactctgacattcctgtgcatgacataattgtggtt
ttcaaatctgagcttgcttctgatgttggaaacatgcaatttgacatggaagtagactgg
ggtaatatgtcagtggacataaaatatgcaggaaagatcaatctcagtgatgaacaggta
actctttgtagacaatatcaggctgctgtatttagagttctaagagatcgtaattttgat
aagctagtggaatcgttgaaggggttgtatgaatgggagaaaaatgttgatgtgcctgtt
tcacattatgactatattcttctcccccgtcaatggcttcatcgaagctctcttatcgat
ttggaatgtataagctctgcatcctttttacgcgatgttgttcaaggttccttctctaac
tgcaataaatgcaagtgtgctcatcaagatgatgtctacaccaagaacgggtttttacat
cgtagtgtgctggaaaattgtttggtctgcacaccccataatggttacatctattctatc
tctggaattttagatggcatgaatgggaactcttatttgagtttgagtgatggtacatta
aaaacttacaagagttactacaaaatgagacatgggattgacttgaaatatgaaaatcaa
gccctgctttgtgggaggcaggttttccgactgaagaattactttctaaggtgccagcag
agaagggagaaggagccaagtggtgcttctgttgaactgcctcctgaactatgtctcatc
atcatgtcgcccatatcagttgctacgatttatacttattcattccttccctctattatg
catcaagttgaagctctactattgagtgccaacttgagaggcattatcttggatcactgc
atgcaaaatgtttttattccagccaccaaggttctagaagcaattacaactaaacattgt
caagagaaattccatctcgaatccctagagacccttggtgattcttttttgaagtatgct
gtctgccaacagctgtttaaaactcaacaaaataaccatgagggactccttagtataaaa
aaagatagaattatatctaatgctgcactgtccaagctagggtgccaacgcaagattcca
ggtttcatacgcaatgattcctttgatcctaagcattggatcatacccggtgatcctata
gactgtagactaaataaagagtttatttctaacacttataaggtctacaatggtggaata
aggaaaattaaaagcaagagagttgctgatgttgtagaagcactaattggagcatttttg
agctctggtggacaagtacctgctttgatgtttatgaactggcttggtatagaggtggaa
ctttcctgtataacataccagaggaacatccctgttaatccccgtttgctagtaaacata
acacatttagagtccattttgaattactcattcaaggacccctcactggttgttgaagca
cttacccatggttcatatatgttacctgaaattcctcgatgctatcaacgtttggagttt
ctgggagatgcggtgttggatcatctgatcaccattcacctttactcgaaatatcctgat
atgtctcctggcctgttgactgatctaagatcagcctcagttaataatgaatgttatgct
ctatctgccatccgtgctggacttcacaagcatatacttcatgcttcccaaatcctatac
aaacagatgggtgctgctgtggcaagttttcagcatttatctttagagtcaacatttgga
tgggagtctgagacaaattatcctaaggttctagcagatataatagaatctttagctggg
gctatcttcgttgattctggattcaacaaagaggctgttttcaagagtatatcacctctt
ttggagcccctaatcactccagaaactctgaagttaaatccagtgagtgagttgaattat
atatgtcaaaaacgtcattacgctatgagaaaatatagaacttgtgaaaacggcgtggct
tccataacacttgaggttgaagcaaatggggttgtacacaaacatacatgcactgcttct
gataagaagatggccaaaaaaattgcctgtaaagctattctcaagtccctataa
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