KEGG   Chenopodium quinoa (quinoa): 110736810
Entry
110736810         CDS       T05764                                 
Name
(RefSeq) pre-mRNA-splicing factor 38-like
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110736810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cqi03041]
    110736810
Spliceosome [BR:cqi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    110736810
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    110736810
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 110736810
NCBI-ProteinID: XP_021772816
LinkDB
Position
Unknown
AA seq 381 aa
MANRTDPLAKSIRGTNPQNLVEKIVRTKIYQNTYWKEQCFGLTAETLVDKAMELDHIGGT
YGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEDYKYVRILGAFYLRLAGTDSDIYLYL
EPLYNDYRKLRMKKPDGQFLLTHVDEFIDELLTKDYSCDIAMPRIKKRWNLENIGALEPR
RSALEDDFEEEEEKEEDEMDVDVDEHEKDYRGRSPVRDRDRRRDSHRYRDRDYDRDYDRD
YDRERGRGRDRDRDRDRDRDRDRDRDRDRDRDRYRIKDEKDYGRDRDRRDRDRGRRRSRS
RSRSRSKDRKDREGDRKRHGRSPSPRRHGDEDNGAREESKKTKKKKEKEKEKKDDGTDHP
DPEIAEANKLRAKLGMKPLKL
NT seq 1146 nt   +upstreamnt  +downstreamnt
atggcgaatcgtacggacccactagcgaagagcataagaggtacgaatccacagaatttg
gtcgaaaagatagttcgaacgaagatctaccaaaacacctactggaaagaacaatgcttc
ggtcttaccgccgaaactctcgtcgacaaagctatggagctcgaccatatcggcggcact
tacggcggtaatcgtaaacctactccgttcatgtgtcttgttatgaagatgctccaaatt
caacctgagaaagatatcgtcgtcgagtttattaaaaatgaagattataagtatgtgagg
atactcggggcgttctatttacgtcttgctggaacggattccgatatctacttgtactta
gagcctctgtacaatgattatcggaagctgaggatgaagaaaccggatgggcaattcttg
ttgactcatgtggatgagttcatagacgagcttctgactaaagactattcatgtgacatt
gccatgcctcgcattaagaaaagatggaatcttgagaatattggtgctctggaacccaga
agaagtgccctggaagatgattttgaagaggaggaagaaaaggaagaagatgagatggat
gtagatgttgatgaacatgaaaaggattatcgcggtaggagtcctgtgagagatagggat
aggaggcgtgatagtcacagatacagggatagggactatgaccgtgattatgatcgtgac
tatgatagagaacgtggaagagggcgagatagagaccgagatagggatagggaccgagat
agagatcgggacagagatagggaccgtgaccgagatcgttatcgtatcaaagatgaaaag
gattatggtcgtgatagggataggcgtgacagggatcgtggtaggcggaggagccgctca
agaagccggagtaggagtaaggatcgcaaggaccgtgaaggtgaccgtaagaggcatggt
aggagtcccagccccagaaggcatggagacgaggataatggtgcacgtgaggaatcaaag
aagacgaagaagaagaaagagaaggagaaggagaagaaggatgatggaacagaccatcct
gatccagaaattgctgaagcaaacaagcttcgagctaaacttgggatgaaaccattgaag
ttatag

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