Chenopodium quinoa (quinoa): 110736810
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Entry
110736810 CDS
T05764
Name
(RefSeq) pre-mRNA-splicing factor 38-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110736810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110736810
Spliceosome [BR:
cqi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110736810
Complex C
U4/U6.U5 tri-SnRNP related factors
110736810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
110736810
NCBI-ProteinID:
XP_021772816
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MANRTDPLAKSIRGTNPQNLVEKIVRTKIYQNTYWKEQCFGLTAETLVDKAMELDHIGGT
YGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEDYKYVRILGAFYLRLAGTDSDIYLYL
EPLYNDYRKLRMKKPDGQFLLTHVDEFIDELLTKDYSCDIAMPRIKKRWNLENIGALEPR
RSALEDDFEEEEEKEEDEMDVDVDEHEKDYRGRSPVRDRDRRRDSHRYRDRDYDRDYDRD
YDRERGRGRDRDRDRDRDRDRDRDRDRDRDRDRYRIKDEKDYGRDRDRRDRDRGRRRSRS
RSRSRSKDRKDREGDRKRHGRSPSPRRHGDEDNGAREESKKTKKKKEKEKEKKDDGTDHP
DPEIAEANKLRAKLGMKPLKL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgtacggacccactagcgaagagcataagaggtacgaatccacagaatttg
gtcgaaaagatagttcgaacgaagatctaccaaaacacctactggaaagaacaatgcttc
ggtcttaccgccgaaactctcgtcgacaaagctatggagctcgaccatatcggcggcact
tacggcggtaatcgtaaacctactccgttcatgtgtcttgttatgaagatgctccaaatt
caacctgagaaagatatcgtcgtcgagtttattaaaaatgaagattataagtatgtgagg
atactcggggcgttctatttacgtcttgctggaacggattccgatatctacttgtactta
gagcctctgtacaatgattatcggaagctgaggatgaagaaaccggatgggcaattcttg
ttgactcatgtggatgagttcatagacgagcttctgactaaagactattcatgtgacatt
gccatgcctcgcattaagaaaagatggaatcttgagaatattggtgctctggaacccaga
agaagtgccctggaagatgattttgaagaggaggaagaaaaggaagaagatgagatggat
gtagatgttgatgaacatgaaaaggattatcgcggtaggagtcctgtgagagatagggat
aggaggcgtgatagtcacagatacagggatagggactatgaccgtgattatgatcgtgac
tatgatagagaacgtggaagagggcgagatagagaccgagatagggatagggaccgagat
agagatcgggacagagatagggaccgtgaccgagatcgttatcgtatcaaagatgaaaag
gattatggtcgtgatagggataggcgtgacagggatcgtggtaggcggaggagccgctca
agaagccggagtaggagtaaggatcgcaaggaccgtgaaggtgaccgtaagaggcatggt
aggagtcccagccccagaaggcatggagacgaggataatggtgcacgtgaggaatcaaag
aagacgaagaagaagaaagagaaggagaaggagaagaaggatgatggaacagaccatcct
gatccagaaattgctgaagcaaacaagcttcgagctaaacttgggatgaaaccattgaag
ttatag
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