Chenopodium quinoa (quinoa): 110736933
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Entry
110736933 CDS
T05764
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110736933
03036 Chromosome and associated proteins [BR:
cqi03036
]
110736933
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
110736933
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110736933
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
110736933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
AAA_19
ResIII
UvrD-helicase
AAA_22
UvrD_C
PhoH
SNF2-rel_dom
SLFN-g3_helicase
Mov-10_helical
AAA_7
DEAD
ATPase_2
Helicase_RecD
AAA
E1_4HB
Motif
Other DBs
NCBI-GeneID:
110736933
NCBI-ProteinID:
XP_021772965
UniProt:
A0A803KP90
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MSVYGDKSDDEYSVIGDKGEIGFIDFEDDKSVFSYDPSEEGPVVISVPFPSIEHKPQSIS
VGEVAADSITIKNSTRDPVELWGIQIYASNPEDSFTLSLMEPSKPGFLGSSSLEDRILQP
LKTLTVWLSCKPADIGMYTCIVHFDVGNDRIERVVFLLAEDSVSKALASKKPYQRARKKT
NFVIDSYVEGVRPARPNYRGFRNKLPIYEIPKEIREVIENKQVPDAIIEGLSRKNYVPFF
RTLLIMEELRLEHDIKAYDMENVTMRSKGRLFLTLEVLGLAERRPSLVHGDSVFARLTST
DADDQRTYEGYIHRVEADHVYLRFADEFHKRHSDHNFYNIRFMYNRVNMRRLYQAIEGAE
KVHKAFLFPSESLAKRQITPTPMVPISSNLNEEQLNAVEMVLGCQGGVPYMINGPPGTGK
TMTLVEVILQLYKTRKSSRILICAASNCAADHILDKILKEKNIKIRENEIFRLNASSRSV
EDMKPECMQFCYFEESVFRCPPLQALLHYRVIITTYMSSVLLHTEGVKQGHFSHIILDEA
GQASEPETLVSISTLCQKDTVVVLAGDPMQLGPVIFSQDAMRHGLGKSYLERLFEYDLYS
EGDEGYVTTLRRNYRSHPEILHLPSQLFYNGELMACYKTTKSTLWEDLLLNKEFPILFTG
VHAYDEREGDNPSWFNRTEASMVVKLIKKLIDKDVAEEDIGVITPYRQQVAKIKTVLENS
GILDVKIGSVEQFQGQEREVIIISTVRSTVKHDEFDRVHYLGFLSNPKRFNVAITRARSL
LVIIGNPHIICKDPYWAKLLWRCVENNSYEGCSLPERQEFNDEIPEQDEWSHAAKQKNRD
NSSSEGYSVPQSQSNNDNFLAEDGWSLDAPVVQQNGADWENEVSKPITNEAEWSDGWTFE
APVVQQNGPELSWENDSSKPDKNEDEWSGGWSLDAPVAQQSGPELSWDNDIPKPVKDEDE
WSDGWKS
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtctatggtgacaaatcagatgatgaatattctgtcattggagacaaaggggag
attggattcattgactttgaggatgataagtctgtttttagttatgatccaagtgaagag
ggtccggttgtcatttctgtgccatttccatccattgagcataagcctcaatcaatttct
gtcggtgaggttgctgctgattcaattaccataaaaaattctactagagatcctgtggaa
ctttgggggatccagatatatgcttcaaaccctgaagattcatttacattgtcgttgatg
gagccttccaaaccagggtttttgggctcctcctctttggaagaccgaatcctgcagccg
cttaaaacattgacagtatggctatcttgcaagcctgcagatatcgggatgtacacatgc
attgtccactttgatgttggaaatgataggattgagcgtgtggtctttctcttggcagaa
gatagtgtctccaaagctttagcttcaaagaaaccatatcaaagagcaaggaaaaagaca
aattttgttatcgattcatatgttgaaggcgtacgtcctgcaaggccaaactaccgtggt
tttcgcaataagcttccaatttatgagataccaaaagaaatcagagaagttatagagaat
aagcaggtacccgatgctatcatcgaaggcctatcaaggaagaactatgtacctttcttt
agaacacttcttattatggaagagttgcgcttggagcatgatattaaagcttatgacatg
gagaatgtcactatgagaagcaagggtcgtctgttcttgactctggaggtcctaggcttg
gctgaaagacgaccttcattagtgcatggagattctgtctttgccagacttacttctaca
gatgctgatgaccaacgtacttatgagggttatatacaccgtgtagaggctgatcatgta
tatctgagatttgctgatgagttccacaagcgtcacagtgatcataatttttataacatc
cgattcatgtacaaccgtgtcaacatgagaagattgtatcaagccattgaaggtgcagaa
aaggtacataaagccttcctctttccatcagagtcgttagcgaagaggcagattacacca
accccaatggtgcccatatccagtaatctcaatgaagaacaactgaatgctgttgaaatg
gttctaggatgccaagggggagtaccttatatgattaatgggccaccaggtactggtaaa
acgatgacgctagtagaagtgatcctccaactttacaaaacccgcaaaagttcccggatt
ttaatatgtgctgcttcaaactgcgctgcagaccatatactggacaaaattctgaaagaa
aagaacattaaaattcgggaaaatgaaatattcaggctcaatgcaagtagtcgttcagtt
gaagatatgaagcctgaatgtatgcaattttgttattttgaggaatctgttttccggtgt
cctccgcttcaggcattgttgcactatagagttattataacaacatatatgagttccgtc
ctccttcatacagaaggcgttaaacagggccatttttctcacattattttggatgaggca
ggacaggcctcagaaccagagaccctcgtttccatttccaccctctgccaaaaggacact
gtggttgttcttgccggagatccaatgcagctaggccctgtcattttctcccaagatgca
atgagacatggattaggaaaatcatatttggaaaggctgtttgaatatgatctctatagt
gaaggggatgaaggttatgtgacaacacttcggcgtaattaccgatcccaccctgaaatc
ctccatctgccttcacaattattttataatggggaattgatggcatgttataaaaccaca
aagtctacactttgggaggatcttcttctaaacaaggaatttcccattctttttaccggc
gtccacgcttatgatgagagggaaggagataatccctcatggtttaaccgcactgaggct
agcatggtagttaagcttatcaagaagctcattgataaggatgtcgctgaagaggatatc
ggagtgattacaccttacaggcagcaagtagccaaaattaaaacggttcttgaaaatagt
gggattcttgatgtcaagattggcagtgttgagcagtttcaaggacaggagagagaagta
attattatatccactgtccgatcaactgttaaacatgatgaatttgacagagtccattat
ttaggatttctaagcaatccaaaaagatttaatgttgccatcactcgagccagatctttg
cttgtcattatagggaacccccatataatctgtaaggatccttactgggcaaagcttctg
tggcgttgcgtagaaaataattcctacgagggttgttcccttccagaacgacaggaattc
aatgatgaaattccagagcaggacgaatggtctcatgctgcaaagcaaaagaatcgtgac
aacagctcctctgagggctattccgttcctcagagtcaaagcaataacgacaacttcctg
gcagaggatggatggtctcttgacgcccctgtggtgcagcagaatggtgcagactgggaa
aatgaggtttctaaacctatcacgaacgaagctgaatggtctgatggatggacttttgaa
gcccctgtggtgcagcagaatggtccagagctatcctgggaaaatgattcttctaaacct
gacaagaacgaagatgaatggtctggtggatggtctcttgatgcccctgtggcgcaacag
agtggtccagagttatcctgggataatgatattcctaaacctgtcaaggatgaagatgaa
tggtctgatggctggaagtcttaa
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