Chenopodium quinoa (quinoa): 110737988
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Entry
110737988 CDS
T05764
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110737988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110737988
03036 Chromosome and associated proteins [BR:
cqi03036
]
110737988
Transcription machinery [BR:
cqi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110737988
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110737988
PBAF complex
110737988
GBAF(ncBAF) complex
110737988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Motif
Other DBs
NCBI-GeneID:
110737988
NCBI-ProteinID:
XP_021774034
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MPTSPSDARHKRRKARGPKTMKRHRSGDEEEEDEEEENEVAAEADEDEDLHPNPKNAQNP
RIRAISGPEVISGSGIRISDFPAAMKYDVNRPHSLVLEIAAAEREREIKGQGQCLGGGAN
LENISYGQLQALSAVPADNPALLGLGSGSGDQESSVVITPPPIREGRGVVKMFWDRLHVL
PFHAEWFQPTTVHRLERQVVPHFFSGKSAEHNADKYLDCCNLIVAKYMENLEKRLSIGDC
QELVVGVDHEDLSRIFRFLDHWGIINYCSPSPPRESWSFESYLREDSNGEVHVPSVMLKS
IDSLIKFDLPKCRSKPCDLPSSFPSTSPDLADLDSRVREMLSESNCNFCSQPLLTAYYQS
IKEGDTMLCSNCYHEGRLIIGHSSMDFIKIDPSKEYGDQDGDTWTDQETLLLLEALEIFN
DSWNEIAEHVGTKSKAQCILHFLRLPVEDGLLEKVEVPCSSGQTNGSVMDNHGRPCLNEN
GVSSGPQEHVSSENRFPFVNSENPVMALVAFLASAVGPRVAAACAHASLAALAEDDGSLH
GNRMDSDEGPVQKEFSQLKDKLNSEASYLSAEKVKCAAKAGLAAATMKAKLFADHEEREI
QRLSANIINHQLKRLELKLKQFAEVETLLMKECEQVEKTRQRLAGERARACTTRFGTSGV
PSPIYLSGQVNNNINSKPPSASPSQPGVSGYANSQMNHPQMSFVPRQQMFSFGLRLPLSA
IQPSSSGMPSSVMFGAQGSGQSLSHQMLRPVTGTSTGMG
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgccaacttctccatcagacgctcggcacaaaaggcggaaagcaagggggccaaagacc
atgaaacggcaccgtagcggtgatgaggaagaagaagacgaagaagaagagaacgaggtt
gcggcagaggcagatgaagacgaggatctccaccctaaccctaagaatgcccaaaatccc
agaattagggcaatatctggacctgaagtgatctctggaagtggcatccgaatctcggac
ttccctgctgccatgaagtatgatgtgaacaggccccattcgcttgtgctagaaattgct
gctgctgagagagaaagagaaatcaaggggcaggggcagtgtttgggtggaggtgccaat
ttggagaatatatcgtacgggcagcttcaggcattgtccgctgtgccagcagataaccct
gctctgttgggtttgggttcaggttcaggggaccaagagagttcagttgtgattactcca
cctcccattagggaaggtaggggtgtggttaagatgttttgggacaggcttcatgttctc
ccctttcacgcagagtggtttcaaccgacaacagtgcacaggttggaacggcaagtggtg
cctcattttttttctggcaagtctgctgaacacaatgctgataaatatctggattgttgt
aatctaattgttgccaaatacatggaaaacttggagaagaggttatcaattggggattgc
caagaattggttgttggtgttgatcacgaagatctcagtcgaatcttccgtttccttgat
cattgggggatcattaactattgttctccttcgcctcctcgggagtcttggagttttgag
tcgtatttgagagaggattcaaatggcgaagttcatgtgccatcagttatgttgaagtcc
attgatagtttaatcaagtttgaccttccaaaatgtaggtcgaagccttgtgatttgccc
tcgtcatttccctcaacttcccctgatcttgctgacttggacagtagagtacgggagatg
ttatcagaaagtaactgtaatttttgctctcagcccctgttaactgcatattatcagtca
attaaggagggtgatacaatgctgtgttctaattgctaccatgaagggaggcttattatt
ggtcattcaagcatggatttcattaagatagatccttcaaaagaatatggtgatcaagat
ggagatacttggactgatcaggaaacacttctacttcttgaggcacttgaaatttttaat
gatagctggaatgaaatagctgagcatgttggaactaagtcaaaggcacaatgcattctt
cactttcttcgtttacccgtagaggatggcttactagaaaaagttgaagttccatgttcc
tctggtcaaactaatgggtcggttatggacaatcatggtagaccatgtctgaatgaaaat
ggcgtttcttcaggacctcaggagcatgtttcttctgaaaataggtttccattcgtaaat
tctgaaaatcctgtcatggctctggttgcttttttggcttctgctgtaggtcctagagtt
gctgctgcttgtgctcatgcttctttggcagcccttgcagaggatgatggatcattgcat
ggtaataggatggattcagatgaaggtcctgtgcagaaagaattcagtcagctgaaagac
aaattaaattcagaagcatcttatttatctgccgagaaagtcaaatgtgctgcaaaagct
ggtcttgctgctgcaacaatgaaagcaaaattgtttgcagaccatgaagagcgggagata
cagaggctgtctgctaatattataaatcatcagttgaagagattggaattgaagctgaag
caatttgccgaagtggagaccttattaatgaaggaatgtgaacaagttgagaaaacaagg
caaaggctggctggggaaagggctcgtgcttgtacaactagatttggaaccagtggagtt
ccttcaccaatatatttgtctggtcaagttaataataatatcaacagtaaaccaccatca
gcatcaccgtcacagcctggggtttctggttatgccaatagccaaatgaaccatccacag
atgtctttcgtaccacgtcagcaaatgttctcttttgggcttcgcttgccgctttcagcc
atacaaccttcttcctcagggatgccgtcaagtgtcatgtttggtgctcaagggagtggc
cagtctttgagtcatcaaatgttgcgacctgtaacagggactagcacaggcatgggttaa
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