KEGG   Chenopodium quinoa (quinoa): 110738107
Entry
110738107         CDS       T05764                                 
Name
(RefSeq) splicing factor U2af small subunit B-like isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110738107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cqi03041]
    110738107
Spliceosome [BR:cqi03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110738107
 Complex B
    110738107
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus HATPase_c zf-CCCH_4
Other DBs
NCBI-GeneID: 110738107
NCBI-ProteinID: XP_021774167
LinkDB
Position
Unknown
AA seq 324 aa
MAKNLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
GVDSQGNPIDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQYREEE
EAANAHRNLTGRFYAGRLIIVDFSPVTDFREATCRQYEENNCNRGGYCNFMHLKRISREL
RRQLFGRYRRRHSRSRSRSRSPYRRRSYDYDDRHHGRSHSSKRHDDRDSYYESRSRRHRS
TSPDHRRGRSRSPASKRDRRSPSREGSEERRAKIEQWNREKEEAAKMQTDAGNSNDVYYN
EGACNGEENYGFQQQVQQTHQEGY
NT seq 975 nt   +upstreamnt  +downstreamnt
atggcgaaaaacttggcctccatttttggtactgagaaagatagagttaattgtcctttc
tactttaagatcggagcatgcagacatggcgatcgatgttcaaggcttcatactaagcct
agtattagtcctacgcttttgttgtctaatatgtatcaacgtcctgatatgattactcct
ggtgttgattctcagggtaatcctattgatcctcgcaaaattcaggaacattttgaggat
ttttatgaagatctatttgaggaattaaacaaatatggagaaattgagtctctaaatatc
tgtgacaatctggctgaccatatggtgggcaatgtttatgttcagtacagggaagaagaa
gaagctgctaatgcacatcgtaatttaactgggagattctatgctggtcgtcttattatt
gtagacttctctccggtcacagattttcgcgaagcaacttgcaggcaatatgaagaaaat
aattgcaatcgaggtggatattgtaactttatgcatctgaagaggatcagcagggagttg
aggcgccaattgtttgggaggtatagaagaagacatagcagaagcagaagccgtagtaga
agtccatacagacgcagaagctatgactatgatgaccgacaccatgggcgtagtcatagc
agcaaaagacatgatgatagggatagctattatgaaagtagaagcaggaggcatagaagc
actagccctgatcacaggcggggaagaagcagaagtcctgctagtaagagggacagaaga
agccctagcagggaaggtagtgaagagaggcgagcaaaaattgagcaatggaatagggaa
aaggaagaggctgctaagatgcagactgatgctggcaacagtaatgatgtctattacaat
gaaggtgcatgtaatggtgaagaaaactatggattccagcagcaagtacaacaaactcat
caggagggatattga

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