Chenopodium quinoa (quinoa): 110738448
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Entry
110738448 CDS
T05764
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi00040
Pentose and glucuronate interconversions
cqi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110738448
Enzymes [BR:
cqi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110738448
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
110738448
NCBI-ProteinID:
XP_021774549
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MVQRRYIVQILALCSVFTLGSGLYNFTIPGQHPDPEAVAREVHRLVNVSVTRRHLLEDAS
NCATGNPIDDCWRCDPNWGNDRQRLADCGIGFGQYALGGKGGEYYIVTDPSDDDVVNPKP
GTLRYAVIRTEPLWIIFASNMVIHLSQELIFNSYKTVDGRGVDVHITGGGCITLQYISNV
IITNIHVHHCHQSGNTMVRDSPTHYGYRSLSDGDGISIFGSKDLWIDHCSLSHCKDGLID
IVMGSTAITVSNNHFSHHNEVMLLGHSDTYEPDTGMQVTIAFNHFGPKLVQRMPRCRKGY
IHVVNNDFTQWEMYAIGGSGNPTINSQGNRFIAPFDRYAKEVTKRVGTDEKDWKGWNWRS
EGDEMVNGAYFVASGAAVEVQYEKAYSVEPKSSAFIDQLVMHAGVLGDSRHSLGKWSAGP
GDKTGLDSDDYDYSDDYDGATPTNSSPTYTLLFLLLMLSFCYLYVIPNVNFL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaagaaggtacattgttcaaatattggctctatgttcagtttttacacttggt
tcgggcctttacaacttcactatcccgggccagcacccggacccggaagccgtcgcccga
gaagttcataggctggtgaatgtttcagtaactagaagacatttacttgaagatgcttca
aactgcgccaccggcaatccaatcgatgattgctggcgatgtgacccgaattggggaaac
gaccgtcaaaggttggccgattgtggcatcgggtttgggcaatatgcgttaggtggcaaa
ggtggtgagtattacatagtcactgacccttctgacgatgacgttgttaatccaaagcct
ggtacactacgttatgctgttatacgaactgaacctctttggatcatcttcgcttctaat
atggttatccacctttctcaggagctaatcttcaatagttacaagacagtagatgggaga
ggggtggatgtacacataacaggaggaggatgcataaccttgcaatatattagcaatgta
attatcaccaacatccacgtccaccactgccaccaatccggtaacaccatggtccgagac
agcccaacccattatggttatcgaagtttgtccgatggagatgggatctctatatttgga
tctaaggatctttggatcgaccactgctcgctgtctcattgtaaggatgggctcatcgac
attgtaatgggctcaaccgctatcacggtgtccaacaaccatttctctcaccataatgag
gttatgcttctagggcatagtgacacgtacgagcctgatacaggaatgcaggttacaatc
gcgttcaaccattttggaccgaaattagtacagaggatgccaaggtgtagaaaagggtat
atacatgttgtgaataatgattttacacaatgggagatgtacgcaattggtggtagtgga
aatccaaccattaatagccaaggaaatcgttttattgctccttttgatcgttatgccaaa
gaggtaacaaagagagtaggaacagacgagaaagattggaaggggtggaattggagatca
gaaggagacgaaatggtgaacggcgcatattttgtggcgtcaggagcggctgttgaagtc
caatatgagaaagcttacagtgtggagcccaaatcttctgccttcattgaccaacttgtc
atgcatgctggcgttcttggcgacagtagacacagcttaggcaagtggagtgctggacca
ggtgacaaaacaggattagactcagatgattatgattacagcgatgattatgatggagcc
acaccaacaaattcatccccaacttacactcttctatttcttttgttgatgttatcattt
tgttatttgtatgtcatccctaacgtcaattttctatga
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