Chenopodium quinoa (quinoa): 110738625
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Entry
110738625 CDS
T05764
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 50-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110738625
03009 Ribosome biogenesis [BR:
cqi03009
]
110738625
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110738625
Spliceosome [BR:
cqi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110738625
Ribosome biogenesis [BR:
cqi03009
]
Eukaryotic type
90S particles
Helicases
110738625
Pre-60S particles
110738625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SNF2-rel_dom
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
110738625
NCBI-ProteinID:
XP_021774709
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MAVSSSSMNTAFASPQSEFMSLLKQRFSSFHPWRPHLAANPKLPAIFTPKSRSMTVRVNA
GYKKRPMDAPGAYELIDEESGQKVILWGGVDDVEPSIPSKKVLSWTPSKDKKKSSNAREI
VEGSEPSSAVQKNVMSSPTTLRLSKGIGRLKAVKIKSIVRRTSREKEKTNDYRYEEPDLD
ELDNDDDPIVSSDPQGVWIRKKNISAKSGIEQLMENKLSRKPVERKDNLTDAGSYVSATH
SRGWNDREPRRAYRGESRDLTPTRKYNAGSDFFSRKSFRESGCGDEMIEALRVQDFVRPS
NIQAMAYSPVVEGKSCIIADQSGSGKTLAYLAPVIQRLRQEEIEGISKSAAKSPRAVILV
PTAELASQVLLNCRSISKHGVPFRSMVATGGFRQRTQLQTLEQDLDVLIATPGRFMYLIK
EGFLHLTNLRCAVLDEVDILYSDEDFEQALHSLINTAPVTTQYLFVTATLPVEIYNKLVE
TFPDSEVIMGPGMHRTSSGLEEVLVDCSGNEGSEKTPETAFANKKSALLKLAEEIRVSRT
IIFCNKIETCRKVENALRRLDRNENQIRVLPFHAALEQETRLTNMKEFLNSNTENRSLFL
ICTDRASRGIDFPSVDHVVLFDFPRDPSEYVRRVGRTARGAGGIGKAFVFVVGKQVSLAR
RIIERNLKGHPLHEVPSAYELVR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttcttcatcttccatgaacaccgcctttgcttctcctcaatccgaattcatg
tctctactcaaacaacgcttcagttcatttcatccatggcgtcctcacctcgcagctaac
cccaaacttcccgccatttttacgcctaaatcgagaagtatgacggttagggttaatgct
ggttacaagaagaggccgatggatgcaccgggggcgtacgagttgattgatgaggagagt
ggtcagaaagtgattctttggggtggagttgatgatgttgaaccttcaattcctagtaag
aaagtactttcctggactcctagtaaggataagaagaaatcttcgaatgctcgggaaatt
gttgaaggcagtgaaccttcgtctgctgttcagaaaaatgttatgtcatctccaactact
ctaagattgtctaagggtattggaaggttgaaagctgtcaaaatcaaaagcattgtaaga
aggacttcaagagaaaaggagaaaactaacgattatagatatgaagagccagatttggat
gaactagataatgatgatgatccaattgtatcgtcggatcctcaaggtgtctggatcaga
aagaaaaatatttctgctaagagtggcattgagcagctcatggaaaataaattgtcaagg
aaacctgttgagcgaaaggataacttgactgatgctggctcatatgtttctgctactcat
tcaagaggatggaatgatagagaaccaagacgtgcttataggggtgaatcaagagacttg
acacctacacgtaaatataatgctgggagtgactttttcagtcgaaaatcatttagagaa
tcgggttgtggtgatgaaatgattgaggctctgagggtacaggattttgttcgcccttca
aacattcaggcaatggcatattctcctgtggtagaggggaagagctgcattatagctgat
caaagtggatcagggaaaacattggcatacctggctccagttattcagcgtcttagacaa
gaagagattgaaggaattagtaaatcggcagcaaaaagtcctcgagctgtaatattagtc
ccaactgccgagctagcttcccaggttctgctgaattgtcgatccatctcaaaacatggt
gttcccttccggtctatggttgcaacaggaggctttcgacagcgaactcagttgcagact
cttgaacaggatttggacgtgcttattgccacaccgggacgtttcatgtacttaatcaaa
gaagggtttttacatttgacaaaccttagatgtgctgtgttggatgaagtggatatactc
tatagtgatgaagattttgaacaagctttgcatagtctaataaacacagcaccagttact
acgcagtacctcttcgtgactgccacattacctgtggaaatttacaacaaattagttgag
accttcccagatagtgaggtgatcatgggtcctggaatgcatcggacgagctccggtctt
gaagaggttcttgtagattgtagtgggaatgaagggtcagaaaagaccccagaaacagcg
tttgccaataagaagtctgccctcttgaagcttgcagaggagattcgagtttctaggact
attatattctgtaataagattgagacatgtcgaaaggttgagaatgccctgagacgtctt
gatagaaacgaaaatcagatacgagttttaccatttcatgctgctttggaacaagaaaca
aggctcacgaatatgaaggagttccttaattcgaatacagaaaaccgctctctgtttcta
atttgcactgacagggcttcacggggaattgattttcctagcgtggatcacgttgtactg
tttgacttccctcgcgatcctagtgaatatgtacgtcgtgttggcagaacagcaagaggt
gcaggaggtataggcaaggcgtttgtgtttgttgttggtaagcaagtttctctggcgagg
aggatcatcgaaagaaatttaaagggtcatcctttacatgaagtgccttctgcttatgaa
ttagtacggtga
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