Chenopodium quinoa (quinoa): 110738897
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Entry
110738897 CDS
T05764
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110738897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110738897
Spliceosome [BR:
cqi03041
]
Common components
Common spliceosomal components
SR proteins
110738897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
DUF2457
Motif
Other DBs
NCBI-GeneID:
110738897
NCBI-ProteinID:
XP_021775044
LinkDB
All DBs
Position
Unknown
AA seq
250 aa
AA seq
DB search
MSSRFSRTIYVGNLPSDIKEHEIEDLFYKYGRILDVELKVPPRPPCFCFVEFESSRDADD
AIRGRDGYNFDGCRLRVELAHGGRGSGSSSASERRAGGRYGASRHTEYRVIVRGLPSSAS
WQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNSEDMKYAIRKLDDTEFKNPWAKSYIR
VKRYDRSPSRSRSRSRSPKKNRSKSLERSVSRSPSRSRSASPVKSTRPKSRSKSRSPSKS
RSRSISPRQY
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgtttctctcgcaccatctatgttggtaacttaccttccgatatcaaagaa
catgagattgaagatctgttctacaagtatggtcgtattttggatgttgaattaaaagtt
ccacctcgacctccttgtttctgctttgtggagtttgagagttcccgagatgctgatgat
gcgattaggggacgtgatggctacaacttcgatggctgtcgcctaagggttgaactcgca
catggtgggcgaggatcaggatcatcctctgctagtgaacgccgtgctggagggcgctat
ggtgcatcgcgtcatactgaatatcgagtcattgtccgtgggcttccatcatctgcatca
tggcaggatttaaaggatcacatgcgaaaagctggtgacgtttgctttgctgaagtttca
cgtgacagtgaaggaacctttggcttggttgactataccaattctgaagacatgaaatat
gctatccggaaactggatgacactgaattcaaaaacccttgggcaaaatcttatatccgg
gtgaagaggtatgacagaagcccaagtaggagccgcagcaggagtagaagcccgaaaaag
aatagaagcaaatcactggaaaggtcagtgtcaagatcaccatctagatcaaggtctgca
tctcctgtgaaatcaaccaggccaaagtctagatccaaatcaagatccccctccaagtca
cggtcaaggtccatttcaccccggcagtactag
DBGET
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