Chenopodium quinoa (quinoa): 110739080
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Entry
110739080 CDS
T05764
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110739080
Spliceosome [BR:
cqi03041
]
Common components
Common spliceosomal components
General mRNP proteins
110739080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
110739080
NCBI-ProteinID:
XP_021775226
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MDFDEYDYLEKTVENPEPPKSKEATNGGDDLVKSGEKERSRSSRRRGEDNEDEDRKSKRS
RSGDDARERDRDQDPDRNREKRSSRHRSRSKERERSEKDGDRRRSSRGDRDKDRDREERN
GRDRDRDRDRERERERDRDSGKKERDREKEGERDRDERDRRSRSHSVRHREDGERTRDKE
YREKSRDREKSRDREIVEKSREKERERSHDRDIRDKESRRHKEKKDDTTEPEADPERDQR
TVFAYQLPLRADERDIFEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAL
SGQLIRGQPVMVKPSEAEKNLVQSTSTTAAGLTVSGAARRLYVGNLVPNITEEQLRVVFE
SFGIIELVQLPRDEAGLCKGFAFVQFARLEDAKAAQVLNGQLDIGGRVMKVSAVTDQPGM
QDAGATTGDLDDDEGGGMALNASSRALLMQKLDRSGNSTGVGGSLASSAVNTGALSMATA
PMPGVAPGVSPLTQPSVAPLGGLPGAGLSAPLSTLSMADTIGVPSECLLLKNMFDPKLET
EPDFDLDIKDDVQDECEKFGPLKHIFVDKNTEGFVYLKFDNTQSAMNAQRALHGRWFAGK
MISATYMLPQDYEAKFPESR
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgagtatgattatttagagaagacggtagaaaatcctgagccaccgaaa
tcgaaagaagctaccaatgggggggatgacctagtaaaatctggggagaaggaacgtagc
cggagttctcggcgtaggggtgaggacaatgaggatgaagatcgcaaatctaagcgctct
agatctggggatgatgcacgtgagcgtgatcgtgatcaagacccagaccggaatagggag
aagcgttcatccaggcatcgatcacgatctaaggaaagagaaaggagtgagaaggatggg
gataggcgtagaagtagcaggggagatagggataaggatagagatagagaagagagaaat
gggagggaccgtgaccgggatagggatagggaaagagaacgcgaaagagaccgtgattct
ggtaaaaaggaacgtgatcgtgagaaggagggtgagagggacagagatgaacgtgatcga
cgtagcaggagtcattcagttagacatcgggaggatggggagagaactagggataaggaa
tacagagagaaaagccgggacagagagaaaagccgggacagagagattgttgagaagagc
cgggaaaaagaaagagaaagaagtcatgacagagatatccgtgacaaagaaagcagacgt
cacaaggaaaagaaggacgacacaacagaaccagaggctgatcctgagcgggatcagaga
acagtctttgcttatcagctccctctaagggcagatgaaagggacatttttgaatttttc
tctagagctggaaaggttcgagatgtacgactcattatggaccgtaattctagacgttcc
aagggagttggctatatagagttctacgatgtaatgtcagttcccatggctatagcactc
tctgggcaacttatccgtggtcaaccggtcatggttaaaccctctgaagctgagaaaaat
ctggtccagtctacatctactacagcagcaggtcttactgtttcaggggcagcacggagg
ttatatgttggaaatttggttcccaacattacggaagaacaacttcgtgtggtttttgaa
tcatttgggattatcgagttggtgcagttacctcgtgatgaagcaggtctttgtaagggt
tttgcttttgtccagtttgcacgtcttgaagatgccaaggcagcacaagttctgaatgga
caactggatattggtggtcgggttatgaaggtttcagctgtcactgatcaacctggaatg
caagatgcaggggcaactactggtgatttagatgatgatgaaggcggtggcatggcttta
aatgcaagttctcgagcgcttctcatgcaaaagttggatcgcagtggcaattctaccggt
gttggtggttcacttgcctcttcagctgttaataccggagctctttctatggctactgca
ccaatgcccggggttgctcctggagtttctcctctcacacagccttctgtagcacctctt
ggaggattgcctggtgctggtctttctgctccactaagcactctttcaatggcagacact
ataggtgtccccagtgaatgtctattgttgaaaaatatgtttgatccaaagctagagact
gaacctgattttgatcttgatataaaggacgatgtgcaggatgaatgtgagaaatttggg
ccactgaaacacatctttgtagacaagaatactgaaggatttgtatacttgaaatttgac
aacacccaatcagcaatgaatgcacaacgtgcactacatggcagatggtttgcggggaag
atgataagtgcaacatacatgctacctcaagattatgaggctaaatttccggagagcaga
tga
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