Chenopodium quinoa (quinoa): 110739224
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Entry
110739224 CDS
T05764
Name
(RefSeq) sm-like protein LSM4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03018
RNA degradation
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110739224
09123 Folding, sorting and degradation
03018 RNA degradation
110739224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110739224
03041 Spliceosome [BR:
cqi03041
]
110739224
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110739224
mRNA degradation factors
5'-3' decay
Lsm complex
110739224
Spliceosome [BR:
cqi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110739224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
110739224
NCBI-ProteinID:
XP_021775372
LinkDB
All DBs
Position
Unknown
AA seq
144 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEEKSRTDRKPPGVGRGRGRGREDGPGRQLKGIGRGMDDGG
KGAGGRGRGGPGGKPGGKVGGRGR
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctctatcattattgaagactgcgcaaggccaccctatgttggtggaattgaag
aatggggagacatataatgggcatttggttaattgtgatacatggatgaatattcatctt
cgtgaagtcatctgtacctctaaggatggagataggttttggagaatgcctgaatgttac
atccgagggaatactatcaagtatttacgagtgcctgatgaggtcattgataaagtccag
gaggagaagagccgcacagataggaagcctcctggtgtagggcgtgggagaggaagaggt
agagaagatggtcctggccggcagttaaaaggcattggacgcggtatggatgatggaggt
aaaggtgctggaggcagaggtcggggtggtcctggtgggaagcctggtgggaaagttgga
ggccgtggtagatga
DBGET
integrated database retrieval system