Chenopodium quinoa (quinoa): 110739231
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Entry
110739231 CDS
T05764
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03082
ATP-dependent chromatin remodeling
cqi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110739231
03083 Polycomb repressive complex
110739231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqi03036
]
110739231
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110739231
Histone modification proteins
HAT complexes
HATB complex
110739231
HDAC complexes
Sin3A-HDAC complex
110739231
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110739231
PRC2.2
110739231
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110739231
Heterochromatin formation proteins
Other heterochromatin formation proteins
110739231
Chromatin remodeling factors
NuRD complex
110739231
NuRF complex
110739231
NuRF complex (fruit fly)
110739231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD_LRWD1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
ANAPC4_WD40
Beta-prop_HPS5
MIOS_WD40
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
110739231
NCBI-ProteinID:
XP_021775384
UniProt:
A0A803LGD6
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MGEEDEVEMTEAQLNEEFAVWKKNTPILYDLVVCHPLEWPSLTVQWLPSSPQINPDSSLA
VHQLILGTHTSDDSPNYLMVADVHLPPNNGPCSSAPKVEIVKMFCVDGEVNRAGFMPQKP
NLVAAKTSGLEVYVFDVAKEANSNVCDPEVRLRGHEKEGYGLSWSPLKEGYLLSGSHDCK
ICLWDVSSMPQSKVLDSMNVYKAHENIVEHVAWHPKNENLFGSVGDDARLMIWDLRSDKP
QQSVIAHEKEVNYLSFNSFNEWIVATASSDTTIGLFDIRKLDTPLHALSSHTEEVFQVEW
DPNHETILASSSDDRRLMVWDLNRVGDEQLEGEAQDGPPELLFSHGGHKAKISDFSWNKN
EPWMISSVADDNTVQIWQMAESIYRDEDDIPAE
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaagaagatgaagttgagatgactgaagcacaattaaacgaagaatttgcagtt
tggaagaagaataccccaattctatacgatctcgtcgtttgtcatcccttggaatggcca
tctctcaccgttcaatggcttccatcatcaccccagatcaacccagattcatctcttgcc
gttcatcaacttatccttgggacccacacttccgatgattcccctaattatctcatggtt
gctgatgttcaccttccccccaacaatggcccttgttcctctgctccgaaggtggagatt
gtgaagatgttttgtgttgatggggaggtgaatcgagctgggtttatgccacaaaagcct
aatcttgttgcggcgaaaacgagtggtttggaggtttatgtttttgatgttgctaaggaa
gcgaactcgaatgtgtgtgatcctgaggtgagattgaggggtcatgagaaggaaggttat
gggctttcatggagtcctttaaaggagggctatttgttgagtggttcccatgattgcaag
atttgtttgtgggatgtgtcctccatgcctcaaagtaaagttcttgattccatgaatgtt
tataaggcccatgagaatatagttgagcatgtggcttggcatccaaagaatgaaaacttg
tttggttcggtgggtgacgatgcaaggttgatgatctgggatctgcgctctgataagccc
caacagtctgttatagctcatgaaaaagaggtcaattatctatctttcaactcattcaac
gaatggattgtggcgacagcttcttctgataccaccatcggactatttgatattcggaag
ctagatacacccttgcatgctttgtctagtcacactgaagaagttttccaggttgaatgg
gatcccaatcacgagaccatattggcatcatcttctgatgacagaaggctaatggtttgg
gaccttaacagagttggtgatgagcagttggaaggagaagcacaggacgggcctccagaa
ctccttttctctcacggaggacacaaggctaaaatatcagacttctcttggaacaaaaat
gaaccatggatgatctcaagtgtggcggacgacaacacagtacaaatttggcaaatggct
gagagtatataccgtgatgaggatgatataccagctgaatga
DBGET
integrated database retrieval system
