KEGG   Chenopodium quinoa (quinoa): 110739880
Entry
110739880         CDS       T05764                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03030  DNA replication
cqi03410  Base excision repair
cqi03420  Nucleotide excision repair
cqi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110739880
   03410 Base excision repair
    110739880
   03420 Nucleotide excision repair
    110739880
   03430 Mismatch repair
    110739880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cqi03032]
    110739880
   03036 Chromosome and associated proteins [BR:cqi03036]
    110739880
   03400 DNA repair and recombination proteins [BR:cqi03400]
    110739880
DNA replication proteins [BR:cqi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110739880
  DNA Replication Termination Factors
   ELG1-RFC complex
    110739880
Chromosome and associated proteins [BR:cqi03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    110739880
DNA repair and recombination proteins [BR:cqi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110739880
  Check point factors
   HRAD17(Rad24)-RFC complex
    110739880
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 AAA RCF1-5-like_lid Rad17 Sigma54_activ_2 AAA_22 RuvB_N Mg_chelatase AAA_5 RsgA_GTPase AAA_11 DUF815 AAA_16 AAA_29 AAA_23 nSTAND3 ABC_tran AAA_24 AAA_2 T2SSE AAA_33 POC1 AAA_30
Other DBs
NCBI-GeneID: 110739880
NCBI-ProteinID: XP_021776051
LinkDB
Position
Unknown
AA seq 354 aa
MLWVDKYRPKNLDKVLIHEQTAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLREMFG
PSAEKVRVENKGWKVDAGTRTIEIELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMARN
RPIDTKGKRGFKVLVLNEVDKLSKEAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAVRSR
CLNVRINAPKNEEIVKVLEFIGKKESLELPPGFAARVAAKSNRSLRRAILLFEACRVQQY
PFTNSQVIPPMDWEEYVSEIASDIMKEQSPKSLFQVRGKFYELLVNCIPPEIILKRLLSE
LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHLEAFVAKFMSIYKGFLIATFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggtggacaaataccgacccaaaaacctagacaaggttttaattcacgaacaa
actgcccaaaatctcaaaaaattggtaactgagcaggattgtccacatttgctgttttat
ggacctcctggctctggcaagaaaaccctaatcatggcccttcttagggagatgtttgga
cctagtgctgaaaaggtcagggtggagaacaagggatggaaagttgatgctgggaccaga
acgattgaaattgaacttactactctatctagcactcatcatgtggagttgaacccaagt
gatgctgggtttcaagatagatatattgttcaagagattattaaggagatggctaggaat
agacctattgatactaaaggaaagcgtggatttaaagtgttggtacttaatgaagttgat
aaactttcaaaagaagcccagcactcgttacgaagaactatggaaaagtatagttcatca
tgtcggcttattctgtgctgcaatagttcttcaaaagttactgaagcagttcgatctcgt
tgtctcaatgtacgaatcaatgctcccaagaatgaagagattgtcaaggtactggagttt
attgggaagaaagaaagcctggaactcccgcctggatttgctgctcgggtggctgcaaaa
tccaatcgcagtctaagaagagcaatactactgtttgaggcgtgccgtgtccaacagtat
ccttttacaaatagccaggtgattccccctatggactgggaggaatacgtctctgagata
gcatctgatattatgaaggagcagagccctaaaagtctcttccaggttcgagggaagttc
tatgagctactagttaattgtatacccccagaaattatactaaagaggcttctttctgag
ttattgaagaaactagatgcagaattgaagcatgaagtttgccattgggctgcctattat
gaacatcggatgcgtcttgggcagaaagccatattccatctcgaagcgtttgtagccaag
tttatgagcatttacaagggtttccttattgcaacttttggctga

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