Chenopodium quinoa (quinoa): 32958974
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Entry
32958974 CDS
T05764
Symbol
rpoA, CDC77_pgp031
Name
(RefSeq) RpoA
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
32958974 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
32958974 (rpoA)
03400 DNA repair and recombination proteins [BR:
cqi03400
]
32958974 (rpoA)
Enzymes [BR:
cqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
32958974 (rpoA)
Transcription machinery [BR:
cqi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
32958974 (rpoA)
DNA repair and recombination proteins [BR:
cqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
32958974 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
SAM_EPH
Motif
Other DBs
NCBI-GeneID:
32958974
NCBI-ProteinID:
YP_009380162
UniProt:
A0A1X9WDF9
LinkDB
All DBs
Position
CP
AA seq
331 aa
AA seq
DB search
MVREKIRVSTRTLQWKCVESRTDSKCLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRAKSEKIPHEYSAILGIQESVHEIFMNLKEIVLRSNLYGTCEASICVKGPRCVTAQD
IILPPYVEIVDNTQHIARLTEPIDLCIGLQLERNRGYHIKAPHNFQDGSYPIDALFMPVR
NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLLIPFLHAEEENLDLE
DNQPKVSFPFFTFHNRLTEIRKNKKKIALKFTFIDQLELPPRIYNCLKKSNIHTLSDLLN
NSQEDLIKIEHFRIEDVKQIFGTLEKHFVID
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaaataagagtatctactcggacacttcagtggaagtgtgttgaatca
agaacagatagtaaatgtctttattatggtcgctttattctctctccacttatgaaaggt
caagctgatacaataggcattgcgatgcgaagagcattgcttggcgaaatagaaggaaca
tgtatcacacgtgcaaaatctgaaaaaataccacacgaatactctgccatattgggtatt
caagaatcagtacatgaaattttcatgaatttgaaagaaatagtattgagaagtaatcta
tatggaacttgtgaggcgtctatttgtgttaagggccccagatgtgtaactgcacaagac
atcatcttgccgccttatgtagaaatagttgataatacacagcatatagctcgcttgacg
gaaccaattgacttgtgtattggattacaacttgagagaaatcgcggatatcatataaaa
gcaccacataactttcaagacggaagttatccgatagatgctctattcatgcctgttcga
aacgtgaatcatagtattcattcttatggaaatgggaatgaaaaacaagaaatacttttt
ctcgaaatatggacaaatggcagtttaactccaaaagaagcactttatgaagcctcccgg
aatttaattgatttattgattccttttttacatgcagaagaagaaaacttagatttagag
gacaatcagcccaaagtttctttccccttttttacctttcacaatagattgactgaaata
cggaaaaacaaaaaaaaaatagcattgaaatttacttttattgaccaattagaattgcca
cctaggatctacaattgcctcaaaaaatccaatatacacacattatcggacctattgaat
aacagccaagaagatcttattaaaatagagcattttcgtatagaagacgtaaaacaaata
tttggcactctagaaaagcatttcgtaattgattaa
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