Corynebacterium qintianiae: G7Y29_03550
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Entry
G7Y29_03550 CDS
T07764
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cqn
Corynebacterium qintianiae
Pathway
cqn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cqn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G7Y29_03550 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqn03400
]
G7Y29_03550 (mfd)
Enzymes [BR:
cqn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G7Y29_03550 (mfd)
DNA repair and recombination proteins [BR:
cqn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
G7Y29_03550 (mfd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
UvrB_inter
DEAD
Helicase_C
CarD_TRCF_RID
ResIII
Cas3-like_C_2
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
QPK83881
UniProt:
A0A7T0PF35
LinkDB
All DBs
Position
MC1420:710258..713833
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AA seq
1191 aa
AA seq
DB search
MTETAPALGGLLTRALTDPKLKGLVNNIGQERLHVTGIDQSRSWAAAAISREVPVLLVTA
TGHEAEDLSAELAALIGAGKVSLFPALETLPHERLSPAADVVGRRFKVLHDMPRVIVAAA
RAACQPVLPAVPPITVKQGSEYDFEELTRDITHCAYEHVDMVAKRGEFATRGGIIDVFPT
TAEHPVRIEFWGDEVTDIRTFAVADQRTIDDVASVELFPARQLLIDATVAAKADTLAREH
PSNPALVQLLTRISEGHHADGMEALIPALTDKPYKVLPELLPAGSVVLVTSPEKVRARIA
DLEATDKEFLEAGWEAAAMGAQGPVAVEGLDVSASSYRSFDSLEVSARKAGQSWWTFAPP
GMFAADDSETLPLEFEAAPAPKGEPKAIEQLYATLKLHVQKNNGTAAFVAPAKGTVERFA
ERLREHGVSARIATPGLEPVDGQVTLYQALSHAGLVFPGPKLVVVTETDVTGNRVGDIAG
AKRRAPRRRGRVDPLSLQPGDHVVHETHGIGKFVKMAERTIKAGDEDSRREYIVLEYQPA
KRGQPNDQLWVPMESLDLLSKYSGGEQPSLSKMGGSDWKNTKKKARAAVREIAGELVQLY
AKRQAAPGHAFAADTPWQAEMEDNFPFVETEDQLAAIDAVKDDMEKPVPMDRVIVGDVGF
GKTEVAVRAAFKAVQDGKQVAVLVPTTLLAQQHYTTFTTRMDGFGVNIRELSRFTSAKES
KEALAGLADGSVDIVIGTHRLLATGVQWKNLGLIVVDEEQRFGVEHKEHIKALKAHVDVL
TMTATPIPRTLEMSLTGIREMTSITTPPEDRHPVLTYVGPQEDKQIAAAIRRELLRDGQV
FYIHNKVADIEKAARRIRDLVPEARVVVAHGQMSEQVLDQTVQGFWDREYDVLVCTTIVE
TGLDIANANTLVVENAQNMGLSQLHQLRGRVGRSRDRAYAYFLYPKDKTLTETSYDRLAT
IAQNNDLGSGIAVAQKDLEMRGAGNVLGAEQSGHIAGVGFDMYVRLVGEAVDTFKALMTG
ETVDATDKGPKEIRVDLPVDAHIPETYVNSERLRLEIYRKLAEARDDAALATVADEMADR
FGPLPQEVERLMAVARLRHQARRAGVSDILVQGTRIKFQPVELPDSKQVRLKRLYPGSNY
RAAAKALQVPFPRAAKGVNQPNLRDTELLQWVSDFLSEMFGVEKKVVAVGE
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaccgcaccagcgttgggcgggttgctcactcgcgcgctgaccgatccgaaa
ctgaaagggctggtcaacaatattgggcaggagcgcctacatgtcacgggcatcgaccaa
tcccgctcttgggccgccgcggcgatctcccgtgaggttccggttctgctggtcaccgcc
acggggcatgaggcggaggacctcagcgcggagctcgcggcgctgattggagccggcaag
gtctcgctgttccccgcgctggaaaccttgccgcacgagcgcctctcgccggccgcggac
gtggtgggaaggcgctttaaggtcctgcacgacatgccccgcgtcatcgtcgccgcggcc
cgcgccgcgtgccaaccggtgctgcccgcggtccctccgatcacggtcaaacagggaagc
gagtacgacttcgaggagttgacccgcgacatcacccactgcgcctacgaacacgtggac
atggtggccaagcgcggggagtttgccacccgcggcgggatcatcgacgttttccccacc
actgccgagcacccggtgcgcattgagttctggggtgacgaagtcaccgacatccgcaca
ttcgccgtcgcggatcagcgcaccatcgatgacgttgcctccgtcgagctgttccccgcc
cgccagctgcttatcgacgccaccgtggccgccaaggctgacaccctcgcgcgcgagcac
ccctcgaacccggcccttgtgcagttgctgacgcgcatctccgagggccatcatgccgac
ggcatggaggcgctgatcccggcactgacggacaagccttacaaggtgctgcccgagctc
ttgcccgccggttcagttgtgctcgtgacctcgccggagaaggtccgcgcgcgcatcgcg
gacctcgaggcaacagacaaggagttcctcgaggccgggtgggaggccgccgcgatgggg
gcgcagggccccgtcgccgtggagggcctggacgtctccgcgtcctcgtaccgctccttc
gattcgctcgaggtttccgcccgcaaggcgggtcaatcgtggtggacattcgcaccgccc
ggcatgttcgcggccgatgattccgagaccctgccgctggaattcgaggccgcgcccgcg
ccgaagggtgagccgaaggcgattgagcagctctacgccacgctgaagctgcatgtgcag
aagaacaacggcaccgcggcgtttgtcgcgcccgccaaaggaaccgtcgagcgcttcgcc
gagcgcctgcgcgagcacggagtctccgcgcgcattgctacaccgggtctcgagcctgtc
gacggccaggtcacgctataccaggccctatcccacgcgggtctcgtcttcccggggccc
aagctggtggtggtcactgagaccgatgtgaccggtaaccgcgtcggcgatatcgcgggc
gcgaagcgccgcgccccccgccgccggggccgcgtcgaccccctgtcgctccaacccggt
gaccatgtggtgcacgagacccacggcatcggcaagttcgtcaaaatggcggagcgcacg
atcaaggccggtgacgaggactcgcgccgggagtacatcgtgctcgagtaccagccggcg
aagcggggccagcccaacgaccagctctgggttcccatggaatccctggacctgttgtcg
aagtactcgggcggggagcagccgtcgctaagcaaaatgggcggctccgactggaagaac
acgaagaagaaggcgcgggcggccgtgcgcgagatcgcgggcgagctggtgcagctctac
gccaagcggcaggccgcgccgggccatgcgttcgcggcggatactccgtggcaagcggag
atggaggacaatttcccgttcgtagagaccgaggaccagctcgccgcgatcgacgcggtc
aaggacgacatggaaaagcccgtgccgatggaccgcgtcatcgtgggcgacgtcggcttc
ggcaagaccgaggtggccgtgcgcgccgcgttcaaggcggtgcaggacggcaagcaggtc
gccgtgctcgtgcccaccacgctgttggcgcagcagcactacaccacgttcaccacgcgc
atggacggcttcggcgtgaacatccgcgagctgtcccgcttcacctcggccaaggaatcc
aaggaggccctcgcggggctcgccgacggctccgtggacatcgtcatcggcacccatcgc
cttctcgccaccggcgtgcagtggaagaacctcgggcttatcgtcgtggacgaggagcag
cgcttcggtgtggagcacaaggagcacatcaaggcgctgaaggcgcacgttgacgtgctg
accatgactgcgaccccgatcccgcgcaccctcgagatgtcgctgaccggcatccgcgag
atgacgtcgatcaccacccctcccgaggaccgccacccggtgctcacctacgttggcccg
caggaggacaagcaaatcgcggcggcgatcaggcgcgagctgcttcgcgacggccaggtc
ttctacatccacaacaaagtcgcagacatcgagaaagcggcgcgccggatccgcgaccta
gtgcccgaggcgcgcgtcgtggtcgcgcacggacagatgtcggagcaggtcctcgaccag
acggtgcaggggttctgggaccgcgagtacgacgtgctggtgtgcaccacgattgtggag
acgggcctggacatcgccaacgccaacaccctggtcgtggagaacgcacagaacatgggc
ttgtcacagctgcaccagctgcgcgggcgcgtcggtcgctcccgtgaccgcgcctacgcg
tatttcttgtaccccaaggacaagacgctgacggagacctcctacgaccgcctagccacg
atcgcgcagaacaacgacctgggatccggcatcgcggtggcgcagaaggacttggagatg
cgcggcgccggcaacgttctcggcgcggagcagtcgggccacatcgcgggtgtcggcttt
gacatgtacgtccggctcgttggggaggctgtcgatacgttcaaggctctcatgacgggt
gagacggtcgatgccacggacaagggcccgaaagagatccgcgtggacttgcccgtcgac
gcccatatcccggaaacctacgtcaactccgagcgcctgcggctggagatctaccgcaag
ctcgctgaggcgcgtgacgacgccgccctggccaccgtcgccgatgaaatggccgaccgc
ttcggcccgctgccgcaggaggtcgagcgcctcatggcggttgcgcgcctgcgccaccag
gcgcgccgcgccggggtttccgacatacttgtccaaggcacgcgcatcaagttccagccc
gtcgagttgcccgattccaagcaagtgcgcctcaaacgcctgtacccgggctcgaactac
cgcgccgcggcgaaagcgctgcaggtgccgttcccccgcgcggcgaagggtgtgaaccag
ccgaacctgcgcgacacggagctgctgcagtgggtctccgatttcctttcggagatgttc
ggggtggagaagaaggtcgttgcagtgggcgagtaa
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