Corynebacterium qintianiae: G7Y29_06305
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Entry
G7Y29_06305 CDS
T07764
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
cqn
Corynebacterium qintianiae
Brite
KEGG Orthology (KO) [BR:
cqn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqn03019
]
G7Y29_06305 (hrpA)
Enzymes [BR:
cqn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
G7Y29_06305 (hrpA)
Messenger RNA biogenesis [BR:
cqn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
G7Y29_06305 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
AAA_25
nSTAND3
AAA_16
SLFN-g3_helicase
ResIII
ABC_tran
T2SSE
NACHT
Motif
Other DBs
NCBI-ProteinID:
QPK82505
UniProt:
A0A7T0KKX7
LinkDB
All DBs
Position
MC1420:1273315..1277214
Genome browser
AA seq
1299 aa
AA seq
DB search
MNASSHPSRAQLFQRLDAVPLSDVRRFTRRLDKARAPESLAAIAADIDAAAAAVETRAAG
IPDISYPEQLPVSARREDIMGLVRDHQVVVIAGETGSGKTTQIPKMLLELGRGRRGLIGH
TQPRRLAARTVAERIADELGQSIGDSVGYAIRFDDRVSPTTAVKLMTDGILLAEMQRDRF
LNAYDTIIIDEAHERSLNIDFLLGYLKRLLPKRPDLKVIITSATIDPERFAGHFADAEGK
PAPIIEVSGRTYPVEIRYRPLVENANGKDVDIDMIDGVVLAVEELMKEGNGDILCFLASE
RDIRDCMEAIEKKRWRGVEVTPLFGRLSNAEQHRVFSPHTGRRIVLSTNIAETSLTVPGI
HYVVDTGLARISRYSTRTKVQRLPIEEISQASANQRSGRSGRVADGIAIRLYSEENFNAR
PEFTDPEILRTNLASVILQMISLRLGDISEFPFLQPPDPKSIRDGLLVLHELGAISDKER
DGAPVLTGIGRDISRIPVDPKMARMLVEANRFGVLDDVTVIVSYMTIQDVRERPLEFQAQ
ADQAHARFKDSASDFASALKLWDYINESRDELTGNAFRKRMKREYLHYMRIREWYDLVRQ
LRDVEKQLGWSRAENVAGERDSDAIHKSLLTGLLSNIGVRDGNSKEFQGTRGTRFLVFPG
SLLSKKPPEFLMAAELVETSRLWARDVAKIQPEWVEKAAGELLKHSYSEPVWSRKRSAAM
VHQTSLLYGLPIVRDRLVPYHRVDADGARNMFIRHALIGGDWNRHHKFIEHNEALLADAA
TVEDKVRRRGLVVDEDTLFDFYDSRLPADVTTARHFDSWWKKKRHEDASFLDFDPDELVS
DTVDASDASFPAVWRQGSIDYALRYTFEPGDPFDGVTVEVPVPLLAGFSAEGFDWLVPGL
RLELVTELIRTLPKALRRSVVPAPDFAAMALPKLAPFAAPLSDELAAALRSVGGAGINAS
DFRPSALPDHLKVTFAAIDKRGGVLDHDKDLAELKRRQAGKIRSSVSKAGRTTETAAAKK
WTADTLGTVPETVAAKIEGNEVDTYPALEATPDGVKVTVHPTKAAADASMVTATLTLLLR
EITVNQGQMTKGLPLRHKVAVDHYPHGGAAGLVEDARVATIRDLMFAAGGPVRSPEEFDA
LVKEVKPKVPSAVRQKVVALAPALVEYANISQELEKWSGPAIDDMRGQLRFFLPPHAVTI
HGMEHLQHVPRYIAAMRIRLDDMTLDPDRDADRQDAVASTHAYLDTKLRSLPPGREKTRA
VKDILWRIQELRVSLFAQRLGTPKPVSQRRVEKMIDTLA
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcttcttcgcacccctcccgcgcccagctatttcagcggctcgacgccgtcccg
ctgtccgacgtccgacgcttcacgcgtcgcctggacaaggcccgcgcccctgagtcgctg
gccgcgatcgcggcggacatcgacgccgcagcagccgccgtcgagacccgcgcggccggt
atccccgacatctcctacccggagcagctgccggtttccgcgcgccgcgaggacatcatg
ggcctcgttcgcgatcaccaggtcgtggtcatcgcgggtgagactggttcgggcaagacc
acccagattccgaagatgctgctcgagctgggccggggtcggcgcgggctgattggccac
acgcagccgcgccgcctcgcggcccgcaccgtcgcggagcgcatcgccgacgagctcggc
cagagcatcggggactctgtgggttacgcgattcgtttcgatgaccgcgtgtcccccacc
accgccgtcaagctcatgacggacggcatcctgctcgccgagatgcagcgcgaccgattc
ttgaacgcctacgacacgatcatcatcgacgaggcccacgaacgctcgctcaacatcgat
tttcttctcggttacctcaaacgactgctgccgaagcggccggacctgaaggtgattatc
acctcggccacgatcgacccggagcgcttcgccgggcacttcgccgacgctgagggcaaa
ccggccccgatcatcgaggtctccgggcgcacctacccggtggagatccggtaccgcccg
ctggtggagaacgccaacggcaaggacgtggacatcgacatgatcgacggcgttgtcttg
gccgtcgaggagctgatgaaggagggaaacggcgacattctgtgctttctcgcttcggag
cgcgacatccgcgactgcatggaggcgattgagaagaagcgctggcgtggtgtggaagtc
actcccctgtttggtcgtctctccaacgcggagcagcaccgggtgttctccccccacacg
ggccgacgtatcgtactgtccaccaacatcgctgagacgtcgctcacggtgcccggcatc
cactacgtggtggacacgggcctggcgcgcatctcccgatactccacccgcacaaaggtg
caacgcctgcccatcgaggagatctcccaggcttccgccaaccagcgctccggccgctcg
ggccgcgtcgctgacggcatcgcaatccgcctctactcggaggagaacttcaacgcgcgg
ccggagttcaccgacccggagattctgcgcacgaacctcgccagcgtcattctgcagatg
atctcgctgcggctcggcgacatcagcgagttccccttcctccaaccaccggacccgaag
tccatccgagacggtctgttggtgctgcacgagctcggggccatctcggacaaggagcgc
gacggggcaccggtgctcaccggcatcggccgcgacatcagccgtatcccggtcgacccg
aagatggcgcgcatgctcgtcgaagccaaccggttcggcgtgctcgacgacgtcacggtc
atcgtctcctacatgaccatccaggacgtgcgcgagcgcccgctcgagttccaggctcag
gccgaccaggcccacgcccgcttcaaggactccgcctccgacttcgcctccgcgctgaag
ctgtgggattacatcaacgagtcccgtgacgagctgactggcaacgccttccgcaagcgg
atgaagcgcgagtacctgcactacatgcgcatccgcgagtggtacgacctggtgcgtcag
ctccgcgacgtcgagaagcagctgggttggtcgcgcgccgagaatgtggcgggcgagcgc
gactcggacgcgatccacaagtcgctgctgacgggcctgctgtccaacatcggcgtacgc
gacggcaactcgaaagagttccagggcacgcgcggcacccgatttcttgtgttccccggc
tccttgctgtcgaagaagccgccagagttcctcatggccgccgagctggtggagacgtcc
cggttgtgggcgcgcgacgtcgccaagatccagcccgagtgggtggagaaggcagcgggt
gaactgctgaaacacagctattctgagccggtgtggtcacgcaagcgctcggctgcgatg
gtgcaccaaacgtcgctgctgtacggtctgccgattgtgcgcgaccgcctcgtgccctac
caccgcgtcgacgcggacggggcgcgcaacatgttcatccgccacgccctcatcggcggc
gattggaaccgccaccacaagttcatcgagcacaacgaggctttgctcgccgacgccgct
accgtagaagacaaggtccgccgccgcggcctcgtcgtggatgaggacacgctgttcgac
ttctacgattcccgtctgcccgcagacgtgaccaccgcgcgccacttcgactcgtggtgg
aagaagaagcgccacgaagacgcgtctttcctcgacttcgacccggacgaacttgtcagt
gacaccgtcgatgcctccgacgcctccttccccgccgtgtggcgccagggttccatcgac
tacgcgctgcgctacacgttcgagcccggcgacccgttcgacggcgtcaccgtcgaggtt
cccgtcccgctgttggcgggtttctcagcggagggcttcgactggctcgtgccagggttg
cgccttgagctggttaccgagctgattcggactctgccgaaagctttgcgacgctccgtc
gtcccagcgccagacttcgcagccatggcactgcccaagctcgcaccattcgccgcgccc
ttgtccgatgaactcgcggccgcgctgcgctccgtcggcggcgccggcatcaacgcgtcc
gacttccgcccgtcggcgctgcccgaccacctcaaggtgacgttcgccgcgatcgataag
cgcggtggcgtccttgaccacgacaaagacctggcggaactcaagcgacgccaggccggg
aagatacgctcgtcggtgtccaaagcggggcgcaccacggagacggcggccgcgaagaag
tggacggcggacactctggggaccgtgccggagacggtggctgcgaagatcgagggcaac
gaggtcgacacctaccccgcgctcgaagctacgcccgatggcgtcaaagtcaccgtccac
ccgacgaaggcggcggcggacgcgtcgatggtgacggcaacgctgacgctgctcctgcgg
gagatcaccgtcaatcagggccagatgacgaagggcttgccgttgcgtcacaaggtcgca
gtggaccattatccccacggaggcgcggccggtctcgtcgaggacgctcgcgttgccacc
atccgcgatcttatgttcgcggccggcgggccggtgcgatcaccggaggagttcgacgcg
ctggtgaaggaagtcaagccgaaggtcccctcagctgtgcgacagaaagtggtcgccctc
gccccggcgctggtggaatacgcgaacatatctcaggagctggagaagtggagtgggcct
gcgatcgatgacatgcgcgggcagctgagattctttttgccgccccacgcggtcactatc
cacgggatggagcacctgcagcacgttccccgctacatcgccgccatgcgtatccgcctc
gacgacatgaccttagaccccgaccgcgacgccgaccgtcaagacgctgtcgcgtccacc
cacgcctatctggacactaagttgcggtcgcttcccccggggcgcgagaagacgcgggcg
gtcaaggacatactgtggcggattcaagagttgcgggtcagtctgttcgcacagcgtcta
ggcacgcccaagcccgtgagtcagcggcgggtggagaaaatgatcgacaccctcgcgtag
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