Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ000857
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Entry
CpipJ_CPIJ000857 CDS
T01079
Name
(GenBank) conserved hypothetical protein
KO
K13133
gem associated protein 5
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ000857
03041 Spliceosome [BR:
cqu03041
]
CpipJ_CPIJ000857
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CpipJ_CPIJ000857
mRNA cycle factors
P-body specific factors
CpipJ_CPIJ000857
Spliceosome [BR:
cqu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
CpipJ_CPIJ000857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIG_1st
Beta-prop_RIG_2nd
TPR_GEMI5
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR55
EIF3I
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
WD40_Gbeta
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_Nup120_160
TPR_IF140-IFT172
Motif
Other DBs
NCBI-ProteinID:
EDS44966
UniProt:
B0W196
LinkDB
All DBs
AA seq
1290 aa
AA seq
DB search
MLPRVKSLACSQDWTERREFATLDDQNNLLVWDLDVGLPVKGHKGHVYKAHGGGPRYSDE
VNSAICFTRTQKVLSAEHSLLIVYCLATDTYKIYAELFRDTVVLLSPCPDDRNVFAAGLR
RGLIVLFSLKDMTVLYNMRGHDREVVSIDWMQVPVLPEDTRANWRREERPKKEARKKKVE
KEVETGAAATAAAAVDNSDIFDIYEYNESQEEFGTIVDKQTSSFDKKDRFFDKVHTTEGF
NFLEECQNLKKDIIKAKEEQDLEGEEDEGEGEKQAATNSDDENELDEAEKLRDYIIVDGD
GEEEQDAEPKKEAVMRTIIVSGSRENIIFFWDYKTGLQIDRIVLHSSGANKRMTPGIFIT
PVFANPWKVVANTNVGHVFEWTVSFSFRDTQVRMKTKQNPVRYPVDMAVCLQRARAPIAA
FDPKCGYVWCQTTLRKILGLCVTGQPAIVVDYTCMTTGHECVVESPLESTILAVGCTDKK
LVTVNLATLAYNDVNCVPYMNKVGSSVTALDWHPEKENLIAFGTLEGRIGLLDTGSSNNV
PIMLNPFQTTKVYSLKWCQLSSDGENESTMILMATGQAKSAFYKMTGAGKYDPIELRQFG
MVSCVSASDRHLFVGTNGGVVYVADLCKDFTKLFQRNIASRYISSLQFKDGVLAVSSNDS
HIRLIDFNNGIDDKVEDNVRLLEGHASGVCNVRWGHGDSKLLVSASFDNTVRVWDTTTAS
CLAVYHSVESVFCAIFSPIHENIVIFVGKGTTLAFVDYTKHPPQPDGGKKNKLAIKWAVA
EERNDKRAIREKKRAGKPLSDLEKSIGSMRISDKAGSATPPQSNGHAEPQPELVTPSDVS
APAVTTKQVNQLADRMEQVKFQEIEPRVETLKANMTSLFHLSQREINRPADVLACIGKLV
NYEEPNEDYPEEEEEVQEAAPKPEEVKQPQTNERRYHLEKLFTAEKDLRELIDEETKYHH
VTHTASIGTILLPQVGFRLKEQIIERIASKTLTDQLLALAPSISYEFWRKCSEAYAYQLL
EKKYPLAAIPYFLASHKPCALTSAEKESSFSVCQREERSCGGRSSTQTVCAVVLLREKCS
PRRKVVKSRRRTPEVNVLRSIYRGWPSSGRKTGTVRRRGPKMTDDDICTEGTNRHRSRPA
ALDHWTKHAGARGMLGVNNLRKINAGGEKVWTTAEARGIRLLRGGARKWKCWPITEAIEN
LCQHKYYREAWVICKLRKAADDPVREKVCTEWAQYLETTGNLEGAALVWTAAKQYKNAVA
VLSKRKDITEDIKRAVGVLNDKLQQLAVAE
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccagggtaaagtcgctggcctgctcccaggactggaccgagcggcgcgagttt
gccacactcgacgatcagaacaacctgctggtgtgggacctggacgtcggtcttcccgtc
aagggccacaagggccacgtgtacaaggcgcacggaggcgggccccgctacagcgacgag
gtaaactcggccatttgcttcacccgcacgcagaaggtcctgtcggcggagcattcgctg
ctgatcgtgtactgcctggcgacggacacgtacaagatctacgcggagctgtttcgggat
acggtggtgctgctgtcgccctgtccggacgatcggaacgtgtttgcggcggggttacgc
cgcgggctgattgtgctgttttcgctcaaggacatgaccgtgctgtacaatatgcgaggc
cacgatcgggaggtggtgtcgatcgattggatgcaggtcccggtgctgccggaggacacg
cgtgccaactggcggcgcgaggaacgtcccaagaaggaggctcgcaagaagaaggtggag
aaggaggtcgagacgggagcggcggcgacggcagctgcggcggtggacaattcggacata
ttcgatatctatgagtacaatgaaagccaggaggagtttgggacgatcgttgacaagcaa
acgtcgagctttgacaagaaggatcgcttcttcgacaaggttcacacgacggaagggttc
aactttcttgaggagtgtcagaacttgaagaaggacatcatcaaagcgaaggaggagcag
gatttggaaggagaggaggatgaaggagagggtgagaaacaggcggcgacaaactccgac
gacgagaacgagctggacgaggcggaaaagctgcgcgattacatcattgtcgatggtgat
ggcgaagaggagcaggacgcggaaccgaagaaggaggccgtcatgcgtacgatcatagtg
agcggaagccgcgagaatatcatatttttctgggactacaagaccggcctccagatcgac
cgaatcgtcctgcatagcagcggcgccaacaagcggatgacgccaggaattttcataacg
ccggtcttcgccaacccgtggaaggttgtggccaacacgaacgtgggccacgtgttcgag
tggacggtttcgttttcgttccgagacacgcaggtgcgcatgaagacgaagcagaacccg
gtgcgctacccggtcgatatggccgtctgtctgcagcgggcacgagcgcccatcgcggcc
ttcgatcccaagtgtggctatgtgtggtgccagacgacgctccgcaaaatcctcgggttg
tgcgtaaccggtcagccagctatcgtagtggattacacctgcatgaccaccgggcacgag
tgcgttgtggagagtccgctcgaatcgacgatattggcggtgggctgcacggacaaaaag
ctggtcacggtcaatctggccacgctggcgtacaacgacgtcaactgcgtgccgtacatg
aacaaggtcggcagttcggtgaccgccctggactggcacccggaaaaggagaacctgatt
gcgttcggcacgctcgagggccgtattgggctgctggacacgggcagctcgaacaacgtt
ccgataatgctgaacccgttccagacgaccaaggtgtactcgctcaaatggtgccaattg
tcgtcggacggggaaaacgagagcaccatgatactgatggcgactggtcaggccaagagt
gccttctacaagatgaccggggccggaaagtacgatccgatcgagcttcgccagtttggg
atggtgtcctgtgtatcggcctccgatcgacatctcttcgtgggaacaaacggcggggtt
gtctatgtggctgacttgtgcaaggattttaccaagctcttccagcggaacattgccagt
cggtacatttcgtcgttgcagttcaaagacggcgttcttgcggtttcttctaacgatagt
cacatccggctgatcgactttaacaacggaatcgacgacaaagtcgaggacaacgtccgg
ctgctggagggccacgcgtccggcgtctgcaacgtccggtggggccacggcgacagcaag
ctgctggtgtccgccagtttcgacaacaccgtgcgcgtctgggacacgacgacggccagc
tgtctggccgtgtaccacagcgtcgagtcggtattttgtgccatcttttcgccgatccac
gagaacattgtgatcttcgtcggcaagggcacgaccctggcgttcgtggactacaccaaa
cacccgccgcagccggatgggggaaagaagaacaaacttgccattaagtgggccgttgcc
gaggagcgcaacgacaagagggccatccgggaaaagaaacgcgccggcaaaccgctcagc
gacctggagaaatccatcggttcgatgcgaatttccgacaaggctggctcggcgactcca
ccgcaaagcaacggccatgctgaaccccaaccagaactggtgacgccttccgacgtgtca
gcgcccgcagtgaccaccaagcaggttaaccaactggccgatcgaatggagcaggtcaag
ttccaggagatcgaaccccgggtggaaacgctcaaagcgaacatgacgtcgctgttccat
ttgtcgcaacgcgaaatcaaccgacccgcggacgttctggcgtgcattggcaagttggtg
aactacgaggaaccaaacgaggattaccccgaagaggaagaagaagtgcaagaagcggcg
ccgaaacccgaagaggtgaagcagccgcagacgaacgaacggcgataccacctggagaag
ctgtttacggccgagaaagatttgcgcgagttgatcgacgaggagacaaagtaccaccac
gtgacgcacacggcctccatcgggacgattctgcttccccaggtgggcttccggctaaag
gagcaaattatcgagaggattgcgtccaagacgctgaccgatcagctgttggcgctggcg
ccatcgatttcttacgaattttggcgaaaatgtagcgaagcgtacgcgtatcagcttctg
gagaagaagtacccgctggcggcgataccgtacttcttggcgagtcacaagccgtgcgcg
ctcacttccgctgaaaaggaaagctcattcagtgtttgccaacgtgaggagcggtcgtgc
ggtggaagaagttccacgcaaaccgtgtgcgcagttgttctgctccgcgaaaagtgctcg
ccccgccgtaaagttgtgaagtcccgcaggaggacgcccgaagttaacgtcctcagaagc
atctaccgtggctggccctcgtcgggaagaaaaaccggtaccgtccgccggcgagggcca
aaaatgacggacgacgatatttgcaccgaagggacgaatcggcaccggagccggcctgct
gccttggatcactggacgaaacacgccggcgcgcgcggcatgttgggagtgaacaatctc
cgcaagatcaacgcaggcggggagaaagtttggacgacggcggaggcacgtggaatccgc
ttgctccgcggcggtgctcgtaagtggaaatgttggccgatcaccgaagcgatcgagaac
ctgtgccagcacaagtactaccgcgaggcgtgggtcatctgcaagctgcgcaaggccgcg
gacgatccggtgcgcgagaaggtctgcaccgagtgggcccagtacctggaaacgaccggc
aatctcgagggcgctgcgttggtttggacggcggcaaagcagtacaaaaacgccgtggcc
gtgctgtccaagcgcaaggacatcaccgaggatattaagcgtgcggttggggttttgaac
gacaaattgcagcagctggcggtggcggagtga
DBGET
integrated database retrieval system
