Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ001407
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Entry
CpipJ_CPIJ001407 CDS
T01079
Name
(GenBank) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CpipJ_CPIJ001407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ001407
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
CpipJ_CPIJ001407
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_14
TPR_1
TPR_16
TPR_8
CFAP70_TPR_C
TPR_12
TPR_CcmH_CycH
TPR_17
TPR_11
TPR_6
ANAPC3
RMD1-3
TPR_7
ARM_TT21_C
TPR_9
CFAP70_mid_TPR
CABIN1_N
FAT
TPR_YpiA
TPR_INTS8_3
HIR3_bundle
TTC22_N
PknG_TPR
Motif
Other DBs
NCBI-ProteinID:
EDS31807
UniProt:
B0W3M1
LinkDB
All DBs
AA seq
1231 aa
AA seq
DB search
MSSKELKAALKEAREAVKNKKFSDAIKLCNKILREDKENYMALLLMGASYQETDKKEAAA
YLKRALAANSDQTVALQGLATCADDRDLPEVCEKLLALTPDKYGDLHGKLLGVASRGEQV
EKVLGIFEREASKEGEPDRVRSAFQCLSKVLLADPALEGKHETLVERTLEFEVDNPEDPF
LHDKFKRYLKLLYKLKLHEKLVRKACAMHYRFRNDNYPLEWICKVYAEELIDDCSMEKLL
TRPLQQYIDAAIEIKSDSALALVASGILSYRSGEMSRAKELLRKADSVQPNWSICLKVLA
EVYFREKAFGLAENIYRQLKIVNSNLFVALVEDGSEEKLQEAAKYCVDLQKDCDDERFLF
YCAKMNLLLGNLEDLEGFMNKLKALNPQEALEILQKHENSCDCLLELAKLHYEAQNVEQS
FMAALRATKLDPNNAKCFHWLGKLYLHNADTARARKCLEKCISLNPAQKEAIILLSSLYR
TLGEWDANSKLLQSSVALGATGSGSAWAHLQLGLHHLGQQKHDEAIAAFRTVIRYDVANI
TAWEGLADAYMGRGSYSSAAKVFEKTAELKPDNLYPKLQLANIKNILRQHRDAVALFEEL
LSTNEKYFPAVKGIAESYAGLCYYRLGQRLVGKARDHAQSAVDYVTRAIKLKPNFVCLWK
LLANVLDTVAEFPRPRSHLLIEGGLAGVAHRKNALVEGEKLFELASRCYSRAIKINGDDS
LLWYELALNHYRRATRFGMVREESVKKLSSAVEAAKQAIKLEPNRWQNWNLLGVICASKE
INNLALAQHCFIEAISVDKKTAAVGWSNLGVMYLLQGSIGLANKAFGRAQQTDTTCINAW
IGQASIAEQMGHAEEAMDLFRHCTQLGYHPESALSYAHWVCSVLSEEDYSKNKRNQFAIE
NMHALPLSHDSIQWHCIDKHDEASVEALSFLGNISSRLGLWATACEAYRKAAAKANGQQK
DHILCDLGQCLLKRKLYSEAVECFQKVSEATYQATVGKALAYFKAGQYQESYAEYESALN
WLATSDLEKAYVLIAMSAMVYAFQGEADAKTILFQCITLPEPPIEALFSACALGLLHKDA
VLTELVIKELRKYEDDPKHGHHVVYLVSQFYWANKQKSQSLAYLVSQVHKWPARAKLRQV
LAISLLKNHRTPKQNLIVASGIAQSALVLDLHDRQGSTRAEDAAKWLAVASEAVRPVDER
RRRVLAQKAVHVDPTCREAWSSLIRVLQAKK
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgaaggaactaaaagcggccctgaaggaggcccgcgaagcggtcaagaacaaa
aagttctccgatgccatcaaattgtgcaataaaatcctccgcgaggacaaggaaaactac
atggcccttctgctgatgggagcctcgtaccaggagacggacaagaaggaagcggccgcc
tatctgaagcgtgccctcgcggcaaactctgaccaaacagtggcgctgcaggggttggcc
acctgcgccgacgatcgggatctgccggaggtctgcgaaaagttgctcgcgctgacaccg
gacaagtatggcgatttgcatgggaagctgctgggggtggccagcaggggagagcaggtc
gaaaaggtgttgggtattttcgagcgggaggcgtcgaaggagggggagccggatcgcgtt
cgttcggcgttccagtgtctgtcgaaggtgctgctggcggatccggcgttggagggaaag
catgagacgttggttgagcgaacgctggagtttgaggtggacaatccggaggatccgttt
ttgcatgataaatttaagcgatatttgaaactgttgtacaagctaaaactgcatgaaaag
ctcgtgcgaaaggcttgcgcaatgcactaccggttccggaacgacaactacccgctggag
tggatctgcaaagtttacgccgaagagctgattgatgattgtagcatggagaagctgcta
acgagaccgcttcaacagtacatcgacgcagcaattgagataaagtcggattcggcgctg
gcgctggtcgccagtggtatcttgagctaccgcagtggggaaatgtccagggcaaaggag
ttgctacgcaaggcggactcggttcaaccaaattggtccatttgtttgaaggtgttggcc
gaggtgtacttccgggagaaggcgtttgggctagcggagaatatctaccggcagcttaaa
attgtgaattcgaatttgttcgttgctttggtggaggatggcagcgaggaaaagctgcag
gaagctgccaaatattgcgttgatttgcagaaggattgtgacgacgaaagatttttattt
tattgtgcaaaaatgaatttgcttctgggaaatcttgaagatttagaaggcttcatgaat
aagctaaaagcgttgaacccgcaagaagcgttagaaatacttcaaaagcacgaaaacagc
tgcgactgtctgctagaactggccaaattgcactacgaggcccaaaacgtggagcagagc
ttcatggccgcgctgagggcaaccaaactcgacccgaacaacgccaaatgcttccactgg
ctcggcaagctctacctccacaacgcggacacggcccgtgcgcgcaaatgtctggaaaaa
tgcatcagtctcaacccggcccagaaggaagcgatcattctgctcagctcgctgtatcgc
accctcggcgaatgggacgccaactcgaagctgctgcaaagctcggttgcgctcggtgcc
accggaagcggttccgcgtgggcccatctccagctcgggctgcaccacctgggccagcaa
aagcacgacgaagcgattgccgccttccggacggtgatccggtacgacgtggccaacatc
accgcctgggagggcctggccgacgcgtacatgggccggggttcgtactcgtccgcggcg
aaggtgtttgagaagacggccgaactgaagccggacaatctgtacccgaagctacagctg
gcgaatattaagaatatccttcgccaacaccgtgacgccgtggcgctctttgaggagcta
ctctcaaccaacgaaaagtactttcccgcggtcaagggtatcgccgaatcgtacgccggt
ctgtgctattaccggctgggtcagcgcctggtcggaaaagcccgcgatcacgcccaaagt
gccgtcgattatgtgacgcgagcgatcaagctgaagcccaactttgtctgtctgtggaag
ctgctggcgaacgtgctggacacggtggcggaatttccacggccacggtcgcacctgttg
atcgagggtgggttggcgggggtggcccaccggaagaatgcgctggtggagggggagaag
ctgttcgagttggccagtcggtgctacagccgggcgatcaagatcaacggggatgacagt
ttgctgtggtacgagctggcgttgaatcactatcgacgggcgacgaggttcggaatggtt
cgcgaagagagtgtgaagaagttgagttcggcggttgaggcagcgaagcaagcgatcaag
ttggaaccgaacaggtggcagaattggaacttgcttggggtcatctgcgccagcaaggag
attaataatttggctctggctcagcactgttttattgaggcgatttcggtggacaagaaa
actgcggccgtgggttggtccaacttgggagtaatgtatttgctgcagggttcgatcgga
ctggccaacaaggcctttggacgggcccagcagacggacacgacctgcatcaacgcttgg
attggccaagccagcattgctgaacagatgggtcacgccgaagaggcgatggacctgttc
cgacactgtacacagcttggctaccatccggaatcggcgctaagttatgcgcactgggtt
tgctcggttctcagtgaggaggattacagcaaaaacaagcgaaatcagtttgcgattgaa
aacatgcacgcgctgccgttgtcgcatgattcgattcagtggcactgcatcgacaagcat
gacgaagcttctgtcgaggcactcagcttccttggaaacatcagcagccggctgggactg
tgggccacggcgtgcgaagcctaccgaaaggcggcggccaaagccaacggtcagcaaaag
gatcacatcctatgcgatctgggccagtgcctgctcaagcggaaactgtactccgaagcc
gtggagtgcttccagaaggtcagcgaagccacctaccaggccacggtcgggaaggcgttg
gcgtacttcaaggccggccagtatcaggaatcgtacgccgagtatgaaagcgcactaaac
tggcttgctacttcggacctggagaaggcctacgtgctgatcgcgatgtccgccatggtg
tacgcattccagggtgaagccgacgccaaaacgattctgtttcaatgcatcaccctaccc
gaaccgcccatcgaggctctcttttcggcgtgcgcccttggccttctgcacaaagacgcc
gtcctcaccgagctagtcatcaaggagctgcgcaagtacgaggacgatcccaagcacggc
caccacgtggtctacctggtgtcgcagttttactgggcaaataaacaaaagtcccaatcg
ctggcctacctcgtgtcccaggtgcacaagtggcccgcccgggccaagctgcgccaggtg
ttggccatctcgctgctgaaaaaccatcgcacccccaagcagaacctgatcgtggccagt
gggattgcgcagagtgcgctggtgctggatttgcacgaccggcagggcagtacccgggcc
gaggatgcggccaagtggctggcggtggccagcgaagcggttcggccggtcgacgagcgg
cggaggcgtgtcctggctcagaaggcggtccacgtggatcccacgtgccgggaggcgtgg
agctcgttgattcgggtgttgcaggccaaaaagtga
DBGET
integrated database retrieval system
