Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ001786
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Entry
CpipJ_CPIJ001786 CDS
T01079
Name
(GenBank) collagen alpha chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
CpipJ_CPIJ001786
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cqu00536
]
CpipJ_CPIJ001786
Glycosaminoglycan binding proteins [BR:
cqu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
CpipJ_CPIJ001786
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
DTHCT
Motif
Other DBs
NCBI-ProteinID:
EDS32619
UniProt:
B0W426
LinkDB
All DBs
AA seq
1839 aa
AA seq
DB search
MREADARRGKPGWSGGFRQRKCYTLGGVENVRVPAASIFGRVVTVAIIAAGLFAGCEAVA
SKDGLVDFIELFGIPRLPSGITPTSGMCNETRNEYQTYPAAAYNLNQDTVLSIGTTQAFP
AGFPTDFSLLVVLKATPNLVRVPLFSVYSSDSEEVLMLMVGMEVALYYQDTDGEPEEESL
ISFGVGIDDQRWHRLGISVKGDSVTLVLDCNTQITRQLKRKPSSTIAVDGLILTGMQLNE
DDGFFTGDVQLFMVANTPDEAYHICTRYAPSCAGSVDYGSVHISSGVHSQSFQAGSAANS
SSSSQRQSGYESTRDQVNRQVVSSSSSATGSQSYGHREFVDLTGEADGLESIGEDDEYYN
NLELEGESKQPEHQTYSTSTQRSYEDQYRAEFNRTTSDGYDQYGRRPILPLPDPEYDSSA
TNRRQPDGEQPYEDIEPFHDPGSPGSDDSSVSFPILPSNNRSIGGVRTIVGPRGLPGEPG
PKGDPGRDGLSGQSGPPGPPGHVFMIPLSQSTNEKGPDTQAEAFRQMLSQHMMAMRGTDG
PMGLTGVPGPVGPPGPEGTKGEPGDIGEPGPRGLRGPAGLPGREGRRGRAGRDGERGLAG
LQGLKGEPGPIGLPGIPGEKGERGRIGHAGEKGAQGHEGIQGEDGPPGLPGLPGELGPRG
FTGGRGFPGPPGNPGLPGTEGLPGVKGNPGPQGQPGAPGQTGPTGPIGPPGPQGNMGPPG
IPGPHGKPGLPGLPGADGAPGREGNPGIVGPKGDQGPQGVQGSIGFPGNRGPKGDDGERG
APGDRGEKGERGHDGEKGDMGPSGERGAIGPQGITGIEGPEGPKGFEGPRGEPGAMGLSG
EKGKQGVQGFTGYPGPTGDKGDKGSVGISGLTGDKGERGNTGLQGERGEVGPRGFRGPRG
RRGADGTPGFKGDTGQPGAPGPQGEIGLQGPEGPRGFIGLPGPQGNNGKDGPQGTPGERG
PPGENGNPGPTGAPGVIGPQGQTGEPGPVGEPGIPGLPGMPGEPGVPGDTGKEGQVGPPG
PPGKNGPPGAQGLSGFPGERGMMGMPGLPGLKGEIGVPGNSGPVGDKGQPGEPGKEGPPG
PEGRRGQTGPPGSVGLKGERGDMGLMGPIGRDGLPGQRGLTGPPGPQGPPGEDGDKGDMG
PPGEKGFKGAQGEAGPTGSPGSQGSRGEPGAAGPPGEKGPPGEMGRAGGKGEDGPTGLPG
PPGASGPQGMPGPPGMKGGRGDDGPIGPAGPIGLPGEPGRRGPRGAEGGPGATGPAGPQG
LAGEPGAQGPPGPQGPEGKEGEKGSIGPKGEEGKSGPPGPPGKRGPAGAEGPKGVAGAQG
FPGNPGEPGVVGPKGDTGKDGEDGKQGEPGLSGEPGPVGLPGEMGSPGKMGPEGPAGSQG
TPGLPGEKGDRGLPGPAGNIGITGPQGMPGPQGLTGLRGSPGASGEIGPTGKSGETGPAG
KIGETGAKGQKGDRGKRGPKGHRGELGMVGLKGDMGEKGDKGSRGNQGIDGPKGPPGPVG
PLGLKGNDGPQGTPGGDGPLGPKGSEGVAGMRGDPGPPGLPGPPGPPAEAPLIPPELLFR
MSEFSITKGEDRMKREAEDIPEEEDDFDEELLKIEPKKKKKKKKIKDDLGPKFLDMYSSI
YSMRQELDRIRKPVGTRENPGRTCRDLHYGHPQFKDGWYWIDPNLGMADDAVYVFCNMTA
EGETCVFPDLHSSQMPNIPWRKENDKTDWYSNLRGGFRISYETVGVVQMTFLRILSQGAY
QNFTYTCMNSVAWFSTEENNYDNAIRFLGDNEIDLGYENSKLRPGVLMDGCKTGKSKSET
IFEIRTAKLQYLPIIDFYPVDYGQPQQAFGFQVGPVCFK
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgagagaggcagacgcaaggagaggaaaaccgggatggtccggcggattccggcagcgg
aaatgttacacacttgggggtgtggaaaatgttcgagtgccggccgccagcatcttcggg
agagttgtaacggtcgccatcattgctgctggattattcgccggatgtgaggctgttgct
agcaaagatggactcgttgacttcatcgagctgtttggaattcctaggctaccctcgggc
atcacacccacttcaggcatgtgcaacgagacccgcaacgagtaccaaacatatccggcg
gcggcctacaacctcaaccaggatacggtgctaagcatcggaacgacccaagccttcccg
gccggctttcctacggacttttctctgctggttgtgctgaaggccactcccaaccttgtc
cgggtaccgctgttttcggtgtactcgtccgactcggaggaggtcctgatgctgatggtc
ggcatggaagtggcgctgtactaccaagataccgacggtgaacccgaggaggagagcttg
atcagcttcggcgttggtatcgacgatcagcggtggcatcggttgggaatcagtgttaag
ggagattctgtcacgttggtattggactgtaacacccagatcactagacaactgaagagg
aaaccatcttcgacaattgccgtcgatggattgattctgacgggaatgcagttgaatgaa
gatgatggtttctttacgggagatgtacagctgttcatggttgcgaatactcccgatgaa
gcgtaccacatctgtactaggtatgcgcccagttgtgctggatcagtggactacggatcg
gtgcatatttcatccggagttcatagccagtcgtttcaagctggttcagcagccaattct
tcgtcgtcttcccagcgtcaaagtggctacgaaagtacccgagatcaagtgaacagacag
gtggtatcaagttcaagttctgcaacgggtagccaaagctatggtcatcgtgagtttgtt
gatttgacaggggaagccgatggactcgaaagcattggagaagatgacgaatattataac
aatctagaacttgagggtgaatcgaaacaacccgagcaccaaacctacagtacaagtact
cagcggtcgtacgaagatcagtacagagccgaattcaaccgaacaacctctgatggctat
gatcagtacggaagaagaccaattttgccgttgccagatccagagtatgattcgtcagcc
acgaacaggagacaacctgacggtgaacaaccgtacgaagacatcgaaccatttcacgac
ccagggtctccaggcagtgatgattcttccgtttccttcccaatattaccatcgaataac
cgaagtatcggtggtgtccgaaccattgtcggtcctagaggtttgcctggggaaccaggt
ccaaagggagacccaggtagagatggcttatcgggacaatcgggtcccccaggacctccg
ggacacgttttcatgatcccgctgagtcaatcaactaacgaaaagggtcccgacacgcag
gcagaagcgttccggcagatgctgtcccagcatatgatggcgatgcgtggaaccgatgga
cctatgggtttgactggtgttccgggacctgtcgggcctcctgggccagagggaacgaaa
ggtgagccgggggatattggcgaaccgggacctagagggttacgtgggccagcagggttg
ccaggaagagagggaagacgcggacgcgctggaagagacggtgaacgtgggcttgccgga
ttacagggtttgaagggagaaccgggaccgattggattaccgggcattcctggcgaaaaa
ggtgaacgcggccgaattggacatgccggcgaaaaaggagcccaaggtcacgaaggaatc
cagggtgaagatggccctccggggttgccaggtcttccgggagagcttggaccacgaggt
ttcactggcgggagaggatttccaggaccacccgggaaccctggcttaccgggcactgaa
ggcttaccaggagtgaagggaaatcctggccctcagggtcagccaggagcacctgggcaa
acgggcccaacaggaccgattggccctccaggtcctcaaggaaacatgggtccacccgga
attcccggacctcacggaaagcctggtttacccggtttgccgggggctgacggagcacca
ggccgagagggaaatcccggaatagtgggaccgaaaggagaccaaggaccacagggcgtt
caaggatcgatcggttttcccggaaatagaggtcccaaaggggacgacggagaacgagga
gctccgggagatcgcggagagaaaggtgaacgtggtcatgacggcgaaaagggtgacatg
ggaccgtctggcgaacgtggagcgataggaccccaaggtataacgggcatcgagggtcca
gagggacccaagggctttgaaggacctcgtggggagcctggagcgatgggtttgtccggg
gagaagggcaagcaaggtgttcaagggttcaccggatatcctggcccgaccggcgataag
ggagacaagggttccgttggcatttctggattaacgggcgataaaggagaaaggggcaat
accggactacaaggcgaacgcggtgaagttggaccgagaggtttccgaggaccacgtggt
cgtagaggggcggacggaactcccggtttcaagggtgatacaggtcagccaggggcacca
ggaccacagggagagatcgggctccaaggaccagaaggaccacgtggcttcattgggtta
cccggtccgcaaggcaacaacgggaaagatggcccacagggaacgcctggcgagcgggga
cctccgggtgaaaatggcaatccaggaccaacgggtgcccccggtgtcattggacctcag
ggtcaaaccggggaaccaggacccgttggtgaaccagggataccggggttaccaggaatg
ccaggtgagccgggagttcctggtgacaccggcaaggaaggtcaagttggacctccaggt
ccacctggtaaaaatggaccacctggagcgcaagggttgtctggtttcccgggagagcgt
ggaatgatgggaatgccgggtctacctggcctgaaaggagaaatcggagttccgggcaat
tccgggcccgtcggcgacaaaggtcaacctggagaacccggcaaagagggacctccggga
ccagagggtcgtcgcggtcaaacgggacctccaggttctgtaggcttgaaaggggagcgt
ggtgatatgggcttgatgggacctatcggaagagatggattgccagggcaaagagggtta
acgggacctcccgggccccaaggacctccaggtgaagacggcgataaaggagacatgggt
ccacccggtgaaaagggcttcaaaggtgcgcagggcgaggcaggtccaactgggtcgcca
ggatcacagggaagtcgcggagaacctggagctgccggtccacccggcgaaaaggggcct
ccaggagaaatgggtcgtgccggcggaaagggtgaggacggcccaacgggattaccggga
cctcctggtgcttcgggcccccaaggaatgcctggtccgcccgggatgaaaggtggtcgc
ggagatgacggaccgattgggccggcaggtcccattggtttaccaggggaaccaggtaga
agaggacctcgtggcgcagaaggaggaccaggagcgacaggtcctgcgggaccacaaggt
ttagctggtgaacctggggcacagggccccccggggccacaaggtcccgaagggaaggaa
ggtgaaaagggatctattggaccaaaaggtgaggaaggtaagagtggaccacctggacct
cccggaaagcgtggcccagctggcgcagaaggaccaaaaggagtggctggtgcgcaaggt
ttccctggtaatccgggtgaaccgggcgtggttggccctaagggagacaccggaaaggat
ggcgaagacggaaaacagggtgaacctgggttgtctggagaacctggacctgtgggattg
cctggagagatggggtcaccgggaaaaatgggtccagaaggtcctgccggcagccaaggg
actcctgggctaccaggggaaaagggagaccgtgggttgccagggccagctggtaacatt
ggcataactggaccccagggcatgcccggaccgcaaggtttaaccggtttgaggggatcg
ccaggagcttcgggcgagattggaccaacgggcaaatctggcgaaacaggacctgcgggt
aagattggcgagactggggctaagggacagaaaggagaccgtggtaagcgtggacccaag
ggtcaccgtggtgagcttggaatggttggcttgaagggcgacatgggcgagaaaggtgac
aagggaagtcgtggtaatcaaggtatagatggtccaaagggtcctccgggtcctgttggg
cctttgggcttgaagggcaatgacggtcctcaaggcacgcccggtggtgatggtccattg
gggccgaaaggttctgagggcgttgctggaatgcgaggtgatccaggacctccaggatta
cctggcccgcctggtcctccagctgaggctccacttattcctccggaattgctgttccgc
atgagtgagttctccatcacaaagggagaagatcgaatgaagcgagaggctgaggacatt
ccggaagaggaggatgactttgacgaagaactgctcaagattgagcccaagaaaaagaag
aagaaaaagaagatcaaggatgacttgggacccaagttcctggacatgtacagctcgatc
tactcgatgcgccaagagctggaccggatccgaaagccagtgggcacgagagaaaacccg
ggacgtacctgccgtgatctgcactatggccatccccagttcaaggatggttggtactgg
attgacccgaaccttggtatggcggacgacgccgtgtacgtgttctgcaacatgacggcc
gagggtgaaacgtgcgtcttcccggatttgcacagctcccagatgccgaacatcccgtgg
cgaaaggagaacgacaagaccgactggtactcgaacctccggggtggattcaggatatcg
tacgaaaccgttggagtggttcagatgaccttcctgcggatcctctcgcaaggtgcgtac
cagaacttcacctacacgtgcatgaacagtgtggcctggttcagcacggaggaaaacaac
tacgacaatgcgatacgattcctgggcgacaacgaaatcgacttgggctacgaaaactcc
aaactacgtccgggcgtgctgatggatggctgcaaaacgggaaaaagcaagagtgaaacg
atcttcgaaattcgaactgccaagctgcagtacctgccgataattgacttttatccggtg
gactacgggcagccccagcaagcattcggtttccaggtgggaccagtttgcttcaaatga
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