Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ002381
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Entry
CpipJ_CPIJ002381 CDS
T01079
Name
(GenBank) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03030
DNA replication
cqu03420
Nucleotide excision repair
cqu03430
Mismatch repair
cqu03440
Homologous recombination
cqu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CpipJ_CPIJ002381
03420 Nucleotide excision repair
CpipJ_CPIJ002381
03430 Mismatch repair
CpipJ_CPIJ002381
03440 Homologous recombination
CpipJ_CPIJ002381
03460 Fanconi anemia pathway
CpipJ_CPIJ002381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cqu03000
]
CpipJ_CPIJ002381
03032 DNA replication proteins [BR:
cqu03032
]
CpipJ_CPIJ002381
03400 DNA repair and recombination proteins [BR:
cqu03400
]
CpipJ_CPIJ002381
Transcription factors [BR:
cqu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
CpipJ_CPIJ002381
DNA replication proteins [BR:
cqu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
CpipJ_CPIJ002381
DNA repair and recombination proteins [BR:
cqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
CpipJ_CPIJ002381
MMR (mismatch excision repair)
CpipJ_CPIJ002381
DSBR (double strand breaks repair)
HR (homologous recombination)
CpipJ_CPIJ002381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
OB_MEIOB_N
Motif
Other DBs
NCBI-ProteinID:
EDS35978
UniProt:
B0W5Z1
LinkDB
All DBs
AA seq
615 aa
AA seq
DB search
MSFNGLLSTGCIAEIMRGVEMEKSVVQILGSKRIAGSGEQAERYRLLISDGQYLYSFAML
ATQLNEMHHSGQLAEFTVIRIDRFITSVVNRNERGEKRVLIILDLTVVKPGSAVGVKIGN
PQPLTEGGNPSGGAASSGAPTRTESAGAVSNGSSYQNRLNSSVSASNSTQSSLQESLTHP
INSLSPYQNKWVIKARVMSKSAIRTWSNAKGEGKLFSMDIMDESGEIRVTAFKEQCDKFY
DMIEADKVYYITKCQLKPANKQYSTLKNDYEMTMSNETIIQECKDVDASMPGIQYNFVPI
SQITNMEPNAMIDVVGVCKEASELNTFTAKSSGRELTKREVTMVDSSNAAVQLTLWGADA
QNFPTSTNPVVVVKGARVTEFGGGKSLGLVGGSVMKLNPDIDVAHKIRGWYDNGGCDAVI
NSVSTRTGAAGGSYSTEWMTFHETKEKNLGHGDKPDYFQVKALVHNIKSGNAVYKACPQT
DCNKKVVDQDNGQYRCEKCNADFPNFKYRLLVNMLVGDWTSNRWVTVFTELGEQMLGKTS
QEIGDALEYNKDEAEQIFSNISFASFIFKLRTKVEFYGDAARNKTTAVAATPVNHKEYNA
YLVKNIQELTGIGKN
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcaacgggctgctatcgactggctgcattgctgaaataatgcgcggtgtcgag
atggaaaagtcggtggtgcagattctgggctcgaagcggatcgccggcagtggcgaacag
gccgagcggtaccggctgctcatctcggacggtcagtacctgtacagtttcgcgatgttg
gcgacccagctgaacgagatgcaccactcgggtcagctggcagagtttaccgttatccgg
attgatcggttcatcacgtcggtcgtgaaccggaacgagcggggcgagaagcgagtgttg
attattttggacttgacggtggtgaagccgggatctgcggttggggtgaagattggcaat
ccacagccgctgacggagggcggaaatccgagcggaggggcggccagttcgggtgctccg
actaggacagagtcggccggagctgtgagcaacgggtcgtcgtaccagaatcgtctcaac
agtagcgttagtgcgtccaacagtacgcagagctcgctgcaggaatcgttgacccatccg
atcaactcgctgagtccgtaccagaacaagtgggtcatcaaggcgcgagtcatgtccaag
tcggcgatccgcacctggagcaatgccaagggcgaaggcaagctcttctcgatggacatt
atggacgagtcaggtgaaattcgcgtgaccgcgttcaaggagcagtgcgacaaattctac
gacatgattgaagcggacaaagtctattacattacaaagtgtcagctgaagccggccaac
aagcagtactcgacgttgaagaacgactacgagatgaccatgtcaaacgaaacgatcatt
caggagtgcaaggatgtggacgcgtccatgcccggtatccagtacaactttgtgcccatt
tcgcagattaccaacatggaaccgaacgccatgattgatgtggtcggtgtctgcaaggaa
gcgagcgagttgaacacattcacggccaaatcttccggtcgtgagctgaccaaacgtgaa
gtcacaatggtggactccagcaacgccgcagtccaactgaccctctggggcgccgatgcc
caaaacttccccacctcgacgaacccggtagtcgtggtcaagggagctcgcgtgaccgaa
ttcggcggaggaaaatccctcggtctggtcggaggcagcgtaatgaaactgaacccggac
attgacgtcgctcacaagattcgcggctggtacgacaacggaggctgcgacgccgtcatc
aacagcgtttccacccgaaccggtgccgctggcggttcgtactcgaccgagtggatgacg
ttccacgaaaccaaggagaagaacctgggtcacggggacaagccggattacttccaggtg
aaggccctggtacacaacatcaagtcgggcaacgccgtctacaaggcgtgcccacaaacc
gactgcaacaagaaagtggtcgaccaggacaacggacagtaccggtgcgaaaagtgcaac
gccgattttcccaacttcaagtaccggctgctggttaatatgctggttggcgattggacc
tcgaaccgctgggtgacggtcttcaccgagctgggcgaacagatgctgggcaagacgtcg
caggaaattggcgatgcgctcgagtacaacaaagacgaggccgaacaaattttctccaac
atcagcttcgcgagcttcatcttcaagttgcgcaccaaggtcgagttttacggcgatgcg
gcccgcaacaaaaccaccgccgtggcggccacccccgtcaaccacaaggagtacaacgca
tacctggtcaagaacatccaggagctgaccggcatcggcaagaactaa
DBGET
integrated database retrieval system
