KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ002882
Entry
CpipJ_CPIJ002882  CDS       T01079                                 
Name
(GenBank) conserved hypothetical protein
  KO
K03004  DNA-directed RNA polymerase I subunit RPA43
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CpipJ_CPIJ002882
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cqu03021]
    CpipJ_CPIJ002882
Transcription machinery [BR:cqu03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     CpipJ_CPIJ002882
SSDB
Motif
Pfam: SHS2_Rpb7-N RPA43_OB
Other DBs
NCBI-ProteinID: EDS36910
UniProt: B0W6S9
LinkDB
AA seq 444 aa
MGENTFTKYTNYTVKELESYVADPNACVKKLEWNDMLSVLPKYLGDIREGVRACLSQKIG
TYDRKVDGIILAYKNTKILSPLSATHPNSVRVYVKTRADFYVFRPQSGSIIGGTVRYVSS
NYLSAVIYRVFNVTIKLQTHKIQNIVRGKEINFVIKSYDMKSDLPSIEGELIPEKDANKP
QLNGNIKSEARHNGGTARIKSSIGSDDSDDLEPEAQRSAEECDIKPAPSPVKAAKEQKRK
KVKQEPVPTELIEEESIGDEMDSSIRALLSTYEDQLNDSTETNGTIGINGTIKQEAVDAP
SSSKKIKKKKRKSQKIDALEAELLEKFAAQCDEPDAPLTNGHTNGETSEEPVTPKVEKSR
KRKKKHSSSEADEFEASIMSSLLKIASEKSVADDATPIRKAVKKSRKSVRFDDTIMEASF
NTFDTSEQLEISQLPAPNLSSTLK
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgggagaaaatacgtttacaaagtacacaaactacaccgtgaaagagctggagtcgtac
gtggccgatccgaacgcgtgtgtgaaaaagctagaatggaacgacatgttatcggtgctg
ccaaagtaccttggcgacatccgcgagggagtgcgggcgtgcttgtcccagaagatcgga
acctacgaccggaaggtcgacggcattattctggcttacaaaaacacaaagatccttagc
ccactgtcggcgacccatccaaacagtgtccgggtgtacgtgaaaacaagagcggatttc
tacgttttccggccgcaaagcggttccatcatcggtggaactgtgcgatacgtgtccagc
aactacctcagcgcggtcatctaccgtgtgttcaacgttacgataaagctgcaaacgcat
aagatccagaacattgtccgtgggaaggagataaattttgtgatcaaatcgtacgacatg
aaaagcgacctgccaagtatcgaaggcgagttgattccggaaaaggatgcgaacaaacca
cagttaaacgggaacatcaagtctgaagccaggcataatggaggtacggcacggattaaa
tcttccatcggcagtgatgattccgacgatttggaaccggaggctcaaagatctgctgaa
gaatgcgacataaaacctgctccttcaccggtgaaagctgctaaagaacaaaagcgtaaa
aaggtcaaacaggaaccagttcccacggaactcattgaggaagaatcaatcggcgacgaa
atggatagctcgatccgtgcacttctaagcacttacgaagaccagctcaatgattctacc
gaaacaaatggaactattggaattaacggaacaattaagcaagaagcagttgatgcgccc
agttcgtccaagaaaattaagaaaaagaaaaggaaaagccagaaaattgatgcgctggaa
gccgaattgcttgaaaaatttgccgctcaatgtgatgaaccagatgccccgctcacaaac
ggccacacgaatggcgagaccagcgaagaaccggtaacgccgaaggtggaaaagtcccgc
aagcgcaagaagaagcactcgagctccgaagcagacgagtttgaagcgtcgatcatgtcg
tccctgttgaaaattgcatcggagaaatcggtcgcggacgatgcaactccgatcagaaag
gcggtcaaaaagtcgcgcaagtcggttcgattcgacgataccatcatggaggcatccttc
aacacgtttgacacgtcggagcagttggaaatttcgcaacttcctgccccgaacttgtcg
tccacgttgaagtaa

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