Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ003095
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Entry
CpipJ_CPIJ003095 CDS
T01079
Name
(GenBank) conserved hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CpipJ_CPIJ003095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqu03021
]
CpipJ_CPIJ003095
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ003095
Transcription machinery [BR:
cqu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CpipJ_CPIJ003095
RNA polymerase I system
CpipJ_CPIJ003095
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
CpipJ_CPIJ003095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
KOW
Spt5-NGN
KOW6_SPT5
KOW5_SPT5
KOWx_SPT5
KOW2_Spt5
KOW7_SPT5
Spt5_N
DUF3912
Motif
Other DBs
NCBI-ProteinID:
EDS37271
UniProt:
B0W6Z7
LinkDB
All DBs
AA seq
1046 aa
AA seq
DB search
MTLDSGGSARSRSGSGSRSGSDVEQIRMKKKRKISAGSDEEDAEEEQEPEGEDLDSEEIE
DDEDDDRRGGRKKKKKERFGGFIIDEAEVDDEVDEDDEWEEGAQDIGIVPNEVEEFGQTA
REIENRRRGTNLWDNKEDEIEEYLRKKYADESGRKHFGDGGEEMTDEIDQQRRLPGIKDP
NLWMVKCRIGEEKATVLLLMRKFLTYSNTDEPLQIKSVVAPEGVKGYVYIEAYKQTHVKA
AITNVGNLRMGIWKQEMVPIKEMTDILKVVKEQTGLKPKQWVRLKRGIYKDDIAQVDYVD
LAQNQVHLKLLPRIDYTRLRGALRTTSSENDENKKKKKRRPAAKPFDPEAIRAIGGEVTS
DGDFLIFEGNRYSRKGFLYKNFTMSAILAEGVKPTLAELERFEEQPEEINIELAVSSKED
TNSTHTFSMGDNVEVCVGDLENLQAKIIAIDGALITVMPKHEDLKDPLIFKASELRKYFK
TGDHAKVLAGRYEGETGLIVRVEPQRIVLVSDLTMHELEVLPRDLQLCSDMATGVDSLGQ
YQWGDLVQLDAQTVGVIVRLERENFHVLGMHGKVMECKPTALQKRRENRNTIALDSDQNQ
IRRRDIVKVMEGPHAGRDGEIKHLYRNLAFLHSRMYTENGGIFVCKTRHLQLAGGNKTQG
NALMPMGQFGFMSPRIHSPMHPSGGRGGARGGGRGGGRGGANRVSRDKEILGKSIKITGG
PYKGAVGIVKDATESTARVELHSSCQTISVDRNHIAVVGSTPKEGSVSSYIRTPSRTPSG
SYGAQTPVYSGSKTPLHGSQTPSYDVGNRTPYGSMTPSHDGSMTPRHGAWDPAVTNTPAR
SNDFDFNMEEPSPSPGYNPSTPGYQINTPFAPHTPGNMFNTENYSPYQPSPSPSPSPYQV
NYMGTPSPSGYSPATPGAPQSPYNPQTPGASLDSQFGEWCTTDIEVEIRNHDDSDLAGQT
GFIRTVTSGACSVFLPEEDRVVTVLSNNLEPVVPTVAGDRFKVIFGDERETLGEFLSLSS
NKEAIVSINGKKKLLPLNYLCKVKLD
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgactctggacagcggcggctcggcgaggtcgcgcagtggctcgggttcgcggtccggg
tccgatgtggagcagatccggatgaaaaagaagcgcaagatttcggcgggctcggacgaa
gaggatgcggaggaggagcaggaaccggaaggggaggatttggactcggaggagattgaa
gacgatgaagatgatgatcgtcgcggggggaggaagaagaagaagaaggaacgatttggg
ggatttattatcgacgaagccgaggtggatgatgaggtggacgaggacgacgagtgggag
gagggagcgcaggacattgggattgtcccgaacgaggtggaggagtttggccagacggcg
cgggagattgaaaatcgtcgtcgtggcacaaatttgtgggacaacaaggaggatgagatt
gaggagtatttgcggaagaagtatgcggacgagtccgggcggaagcactttggcgatggc
ggggaggaaatgaccgacgagattgaccagcagcgacgacttccggggattaaagatccg
aatttgtggatggtcaagtgtcggattggggaggagaaggctacggtgctgctgttgatg
cggaagttcctgacgtactcgaatacggatgagccgctgcagattaaatcggtggtggcc
ccggagggtgtcaaagggtacgtttatattgaggcgtacaagcaaacccacgtcaaggca
gctattacgaacgtgggaaatttgaggatgggtatttggaagcaggagatggttccgatc
aaggagatgacggacattttgaaggtggtcaaggagcagactgggttgaagccgaagcag
tgggtccggttgaagcgtggtatctacaaggacgatattgcccaggtggattacgtcgat
ttggcccagaaccaggtccacttgaagctgcttcctcgaattgattacacacggttgaga
ggagctctgcggacaacgtcgtcagagaatgacgaaaacaagaagaaaaagaaacggcgt
ccggcggccaaaccgttcgatccggaagcaatccgtgcgattggcggagaagttacgtcc
gatggtgacttccttatctttgagggaaatcgttactcccgcaagggtttcctgtacaag
aactttaccatgtcggcgattctggccgaaggcgtcaaaccaacgttggccgagttggag
cggttcgaggaacagccggaggaaatcaacattgagctggcggtttcgtccaaggaagat
accaactcgacgcacaccttctccatgggagacaacgtagaagtctgcgtgggcgatctg
gagaacttgcaggccaagatcattgccatcgacggggcgcttattacggtgatgcccaag
cacgaagatcttaaggatccgttgatcttcaaggcgtccgagttgcgcaagtacttcaag
acaggagatcacgccaaggttttggccggtcgttacgagggcgaaacgggtttgattgtg
cgcgttgaaccgcaacggatcgtgctagtgtcggatttgacgatgcacgagttggaggtg
cttccgcgggatctgcagctctgctcggatatggcaaccggtgtcgactcgctgggacag
taccagtggggagatttggtccagctggacgcacaaaccgtcggcgtgattgtacgtctg
gagcgggagaacttccacgtgctgggaatgcacggcaaggtcatggaatgcaagccgacc
gcgctgcagaagcgccgcgagaatcgtaacacgatcgcgctggattcggaccagaatcag
atccgtcgtcgggatatcgtaaaggtgatggaaggaccgcacgctggtcgagatggggag
atcaagcacttgtaccgcaacttggcgttcctgcactcgcggatgtacaccgagaacgga
ggtattttcgtgtgtaaaacccggcatctgcagctggccggtggcaacaagacccaggga
aatgccctgatgccgatgggtcagtttggctttatgtcaccccgaattcactcgccgatg
catccatcgggaggtcgtggtggtgctcggggcggtggccgtggaggaggtcgcggtggg
gcgaatcgcgtcagccgggacaaggaaattcttggcaagagtatcaaaattaccggagga
ccgtacaagggtgccgtcggaattgtcaaggacgcgaccgaaagcacggctcgcgttgaa
ctgcactcttcgtgtcaaaccatctcggtcgaccggaaccacattgccgtggtcggatcg
acgccgaaggagggatccgtttcgagttacatccgtactccgagccgtacgccaagtggc
agctacggtgcccaaacaccggtctactcgggctcgaagacaccgctgcacggatcgcag
actccgtcgtacgacgtgggcaatcgtactccgtacggttcgatgactccgtcccacgat
ggcagcatgactccacgtcacggcgcctgggatccagccgtcacaaacaccccggctcga
agcaacgacttcgactttaacatggaggaaccatcgcccagcccgggctacaatccgagc
acacccggttatcagatcaacacgccgttcgctccgcacacccccggaaacatgttcaac
acggagaactacagcccgtaccaaccgagccccagcccaagcccctcgccctaccaggtc
aactacatgggcactccgtccccgagcggatactctccggccacacccggagcgccccaa
tcaccgtacaatccgcaaacacccggcgccagcctcgattcccagtttggcgaatggtgc
accacggacattgaggtcgaaatccgcaaccacgacgattccgatctggccggccaaacc
ggcttcatccggaccgtcaccagcggcgcctgttccgtgtttctgcccgaggaggaccgc
gtcgttacggtgctgagcaacaatctggaaccggtcgtgccgacggtggccggcgatcgc
ttcaaggtcatcttcggtgacgagcgcgaaacgctgggcgagtttctgtcgctgtccagc
aacaaggaggccatcgtgtcgatcaacggcaaaaagaagctgctgccgctcaactacctg
tgcaaggtcaagttggactag
DBGET
integrated database retrieval system
