Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ003232
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Entry
CpipJ_CPIJ003232 CDS
T01079
Name
(GenBank) conserved hypothetical protein
KO
K14323
protein CASC3
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03013
Nucleocytoplasmic transport
cqu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CpipJ_CPIJ003232
03015 mRNA surveillance pathway
CpipJ_CPIJ003232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ003232
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CpipJ_CPIJ003232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-ProteinID:
EDS37834
UniProt:
B0W7B9
LinkDB
All DBs
AA seq
1101 aa
AA seq
DB search
MAIFFPSTIGGRYGKGTDWNTADAAREDTSQQSGLATVESEYDTASDSPSDGEEEYDEQD
EESGESGESGDEEEEEEEELGSETDGGGSDDDVIEVLDYERQSGDGQEQEADAKKKVDDD
EDRSNPQYIPKKGTFYEHDDRTLEDEEDGKELDDENAKNDDASVGGVGGGGSGDGRKGVE
KSMASKTMKKWQASADRWTHDRFDESEQAPKSRAELVSAYGYDIRSEDGPPRARRRRRYA
RGPNKYTRNWEDEDAYSKSNNVNEHTRPRKSLPRPEEFPELGGGIGGMNNSSNNNSLNSS
GSVGKSRSSQNMRRASRQSRSSIDERLDERTGGGRPRPPAERRRVDHDRGGMERDRGERY
DQQRGGPDRNWDREREYDQQVQQHDGQYRDGRNDGGRYSADRMANNNSYHNKENKLLNQR
SSKEKDRRGSDYKVITSLQFKNQTRNKTNEGGLPMAGPGGVAGGQVVHSNSGGALSGSSQ
SNKMNNAMVPPVGGVPERMMDQRPVQQHHYPNQQQQQAQLIPQQPPPQLPQQQAPIQQAQ
PQPQQIQQQQQLHQQQSSYDDHYDSYGDSKMPKDAKFPYNPPANATIQSVEIGQTDIPKY
PPPQSQAQRPSKDRQQPLPAGLPATSNVAALNARSQISPRQIVATPQQQQQYQLQQAQYQ
QQQLHGPPAGQTPTQVPPPQLSQQQAQPPPAQLHHMSAVNPQQQQQMLAAQDSSSRSSKR
YSNLRQRSTLDQPPNVVTVPSPLHEQQQQQLLHQQQQQQLLLQQELHNQQQKLVTSQAPK
PGVYPQQPTLPLNLPNEYLSQPAATSKPQPTSQAPPVQYQHPAAAAAAYYNPNTPAATDF
GTPNAPVPQPPTVVNQQAPNPLLSAPQYPQYSQPSNQYIQAPPPAAYIPQTTAAPQPTPQ
PATAAPPPQILNYVPTINPTPPAQYPAAPYTYTQTAYNPVVPVPQPVAPAPVVPINPSPS
AATAALYQSSGGITYYAPQSQTQAPRPLPSQRRPTAAIPILAPPDRKTKNNRADSAGATG
PGGSSNDGDESQQQPGNNAADNIDHILDNMFVQRAPYQPPTAVTSAARKSPSPGADKDGA
KDADKEAVDKMGESVKVSMIC
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggccatctttttcccatcaaccattggtggccgatacggcaaaggcactgattggaac
accgcagacgccgcccgtgaggacacatcgcagcagagcggcctcgcgacggtcgagtcc
gagtacgacacggcttcggactcgccgtcggacggcgaagaagagtacgacgaacaggac
gaggaaagcggcgaaagtggcgagagtggcgacgaggaggaggaagaagaggaagaactg
ggctcggagaccgacggcggtggttcggacgacgacgtgatcgaggtgttggactacgaa
cggcagagcggcgatggccaggagcaggaagcggacgccaagaagaaggtcgacgacgac
gaagatcggagcaatccgcagtacattccgaagaagggcacgttctacgagcacgacgat
cggacgctggaggacgaggaggacgggaaggagctggatgatgagaacgctaagaatgat
gatgcgtcggtgggaggggttgggggtggcggcagtggagatggccggaagggagttgag
aagtcgatggcttcgaagacgatgaagaagtggcaggcgtcggcggatcgttggacgcac
gatcggttcgatgagagcgagcaggctccgaagtcgcgggcggaactggtctcggcgtac
gggtacgacatccggagcgaggacgggccgccgagggcgcgcaggagaaggcgctatgct
cgcggtcccaacaagtacacccgcaactgggaggacgaggacgcgtactccaagtcaaac
aacgtgaacgagcacacgcgcccgcgtaagtctcttccgcggccggaagagttccccgag
ctgggcggtggcatcggcggcatgaacaacagcagcaacaacaacagtctcaacagcagt
ggcagcgttggaaagtcacgctcgagccagaacatgcgccgtgccagtcggcagtcccgg
tcgtcgatcgatgagcgattggatgagcggaccggcggaggtcgtccgaggccgccggct
gaacggcgtcgggttgatcacgatcgtggtggcatggagagagatcgtggagagcggtat
gatcaacagaggggaggccctgacaggaattgggatcgggagagggagtacgatcaacag
gtgcagcagcacgatggtcagtatcgggatggtcgtaacgacggaggtcggtatagtgcg
gacaggatggcgaacaacaacagctatcacaacaaggagaacaagctgttgaaccagagg
agtagcaaggagaaggatcgccgaggaagtgactacaaggtgatcacgtcgctgcagttc
aagaaccagaccaggaacaagaccaacgagggtggtttgccgatggctggtccgggaggt
gtggccggaggccaggtcgtgcacagcaacagcggaggagcgctgtccggaagtagtcag
agcaacaagatgaacaacgcaatggttccaccagtgggtggagttccggaacgaatgatg
gaccagcgaccagttcagcagcatcactatccgaaccagcagcaacagcaagctcagttg
attccacagcagcctccgccgcaacttccccagcagcaggcaccgatccagcaggctcaa
ccgcagccgcagcagatccaacagcagcagcagcttcatcaacagcagtcgtcctacgac
gatcactacgactcgtacggggattcgaagatgccgaaagacgccaagttcccgtacaat
ccacccgcgaacgccaccatccagtcggtcgaaattggtcaaacggacattcccaagtac
ccgccgccgcagtcgcaggcgcaacgcccgagcaaagatcgtcagcagccgcttccggct
ggtctgccagcgaccagcaacgtagcggcgctcaacgccagatctcaaatttcaccccgc
cagatcgttgcgacgccgcagcagcaacagcagtaccagcttcagcaggctcaataccag
cagcaacagctgcacgggcctcctgcaggtcagacgccgacgcaggttccgcccccgcag
ttgtcacagcagcaggcgcagcctcctccggcacagctgcatcacatgagcgcggtcaat
ccgcaacagcagcagcagatgctcgccgctcaggacagcagttcacggtcatcgaagcgg
tactccaacctgcgacaacggtcaaccctggaccaacctccaaacgttgtgaccgttcca
tcgcctcttcacgagcaacaacagcagcaattgcttcaccaacaacagcaacagcagctg
cttctccagcaagaacttcacaaccagcagcagaagctggtcacctcacaagcccccaag
ccgggcgtttacccacagcagccaaccttgccactgaacctgcccaacgaatatctgagc
caaccggcggccacgagcaaaccgcaaccaacgagccaagcgccgccagttcagtaccag
cacccggcagcggcagccgcagcttactacaaccccaacacacctgccgcgaccgacttc
ggcacccccaacgcaccggtccctcaaccgccaacggtcgtgaaccaacaagcacccaac
ccacttctcagcgcgccccaatatccgcaatactcacagcccagcaatcagtacatccag
gccccgccccctgccgcgtacatcccgcaaacaacggccgcccctcaaccaaccccgcaa
ccagcaaccgcagcaccccctccccaaatcctaaactacgtcccaaccatcaacccaaca
ccccccgcccaatacccggccgctccttacacctacacccaaaccgcgtacaaccccgtc
gtccccgtcccgcaacccgttgccccggccccggtcgtccccatcaacccatcgccctcc
gccgccacggcagctctctatcaatccagcggcggcatcacctactacgcgccccaatcc
caaacgcaagccccacgaccactcccgtcccagcgccgtccaacggcggccatccccatc
ctagccccacccgatcgcaaaacgaaaaacaaccgcgcggacagcgccggcgcaaccggc
ccaggaggctcctccaacgatggcgacgagtcgcagcagcaacccggcaataacgccgcc
gacaacatcgaccacatcctggacaacatgtttgtgcagcgagcgccgtaccagccgccg
acggcggtgacgagtgccgcgcggaagagtccctcgcccggggcggacaaggacggcgcc
aaggacgcggacaaggaagcggtcgacaagatgggcgagtcggtgaaggtcagtatgatt
tgctga
DBGET
integrated database retrieval system
