Entry |
|
Name |
(GenBank) TFIIH basal transcription factor complex p44 subunit
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KO |
K03142 | transcription initiation factor TFIIH subunit 2 |
|
Organism |
cqu Culex quinquefasciatus (southern house mosquito)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:cqu00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CpipJ_CPIJ004242
09124 Replication and repair
03420 Nucleotide excision repair
CpipJ_CPIJ004242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cqu03021]
CpipJ_CPIJ004242
03400 DNA repair and recombination proteins [BR:cqu03400]
CpipJ_CPIJ004242
Transcription machinery [BR:cqu03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CpipJ_CPIJ004242
DNA repair and recombination proteins [BR:cqu03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CpipJ_CPIJ004242
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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AA seq |
411 aa
MADDEDPKEYRWETGYEKTWEAIKEDDDGLVEGSIAEIIQKAKRKRQAMKKGFSKLGMMR
HLYVILDCSEAMSVPDLKPTRLLCTLKLLEIFIEEFFDQNPISQLGVIAMKAKRAEKITE
LGGSCRKHIKAVGNLNKLNLTGEPSLQNGLELALKTLKMVPSHASREILVVMGSLTTCDP
TDIHITIDALKSEGIRCSVVSLSAEIRVCKFLCTETGGVYGAVLDDSHFKDQLLQHIDPP
QAGNQQEFSMIKMGFPHGKTEEGKDPPLTMCMCHIDSTDEPSKLTSGGYHCPQCYSKYCE
LPVECTACGLTLASAPHLARSYHHLFPVPHYQELPFQQQATNCYGCQKLFGETTDKTIYQ
CATCRQFFCIDCDIFVHETMHSCVGCTTIPASVQALHARKPVPPPHSMSLL |
NT seq |
1236 nt +upstreamnt +downstreamnt
atggcagacgacgaggatccaaaggagtaccgctgggaaaccggctacgagaaaacatgg
gaagcaatcaaggaagatgacgacggtctggtcgagggttcgatcgccgaaatcatccag
aaggccaaacgcaagcggcaagcgatgaaaaagggcttcagcaagctcggcatgatgcgc
cacttgtacgtgattctggactgctcggaggccatgtccgttccggatctgaagccaacg
cggctgctgtgcacgctcaagctgctggagatcttcatcgaggagttcttcgaccagaat
ccgatttcccagcttggggtgatcgctatgaaggccaagcgggcggagaagattacggag
ctgggcggaagttgccggaaacacatcaaggccgttggcaacttgaacaagctgaacctg
accggggaaccgtcgctgcagaacgggctggagttggcattgaagacgctgaagatggtt
ccttcgcacgcgagccgggagattctggtcgtgatgggcagtttgaccacgtgcgatcca
acggacattcacatcacgattgacgcgctcaaatcggaaggaattcgttgttcggtggtt
agtttgtcggcggagattcgcgtctgcaagttcctttgcacggaaaccggaggagtttac
ggggccgtcctagacgattcccatttcaaggatcagttgttgcagcacattgatccgccg
caggccggcaatcagcaggaattctccatgatcaagatgggcttcccgcacggaaaaact
gaagagggaaaagatccgccactaaccatgtgcatgtgccacattgacagcaccgacgaa
ccgtccaaactgacctccggcggatatcactgtccacagtgctacagcaagtactgcgaa
cttccggtggaatgcacggcctgcggtctgacactagcctccgcaccgcatctggcccgc
tcgtaccatcatctgttcccagtgccccactaccaggaactcccgttccagcagcaagcc
accaattgctacggctgtcagaaactgttcggtgagaccaccgataaaaccatttaccag
tgcgccacctgtcggcagttcttctgcatcgactgcgatatcttcgtgcacgagaccatg
cactcgtgcgtgggctgtacgacgattccggcttcggtgcaggcgctgcacgcccggaag
ccggttccgccgccgcacagtatgtcgttgttgtaa |