Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ004361
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Entry
CpipJ_CPIJ004361 CDS
T01079
Name
(GenBank) sin3b
KO
K11644
paired amphipathic helix protein Sin3a
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
CpipJ_CPIJ004361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqu03036
]
CpipJ_CPIJ004361
Chromosome and associated proteins [BR:
cqu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
CpipJ_CPIJ004361
REST complex
CpipJ_CPIJ004361
Heterochromatin formation proteins
Other heterochromatin formation proteins
CpipJ_CPIJ004361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
TFIIF_alpha
HHD_RTEL1
PAH_ZNF598
Motif
Other DBs
NCBI-ProteinID:
EDS42571
UniProt:
B0WBN6
LinkDB
All DBs
AA seq
1748 aa
AA seq
DB search
MKRGRTEEIQFGQPPPRVGGTAPHQRMITTTIQPHNAGPTIQYQIASSAASPVSVVGGGK
TTTTTPADVAANLSQQQVVQSSQQVPQQSLAPSQPSTYTTGIAGTNLVKTTGHAQPSAPQ
PAQQIHVVNTTSGQVRGGKVTPSTGVPQGTVGAGGGGGASVVGGGGQVITTLATNVISNA
QPQPPPPPPQGQAQFQRLKVEDALSYLDQVKFRFGNQPQVYNDFLDIMKEFKSQSIDTPG
VIQRVSNLFKGHPELIVGFNTFLPPGYKIEVQANDQGYAFQVSVSVPSTSAGTAVAPQPS
PHKYSTIFQGGGQIVQTGNSAVNLMTYGHSTGSVHTTTIQPVGPSGPGSNANATSISTIP
QSPQNFSRDRERTISGGSGGPTLPANSVGGGTTTVNAVAPDSSVIASQQQQNLHRMISQQ
VIPHPPPQQQQQQQQPQQAPPQQQQQAPAEPQGGGATPNQPVEFNHAITYVNKIKNRFHS
QPEKYKRFLEILHTYQKEQKIYKEGPQGGCNAGAKQLTEAEVYTQVAKLFDNQEDLLREF
GQFLPDATSHAPSSLHAGGANKNHTLHEQSSQPPVPPQPHSKKMSGSVMNASGVKAFNSS
HAANLSRLQERDYGQSEKDFASGGPGAGGGRGSNAGIEKEPRNHVSNQKYAHNAAAMQGS
GLGGGNATKRSPSYQSVAPMGGHGMPPREREGPPTKRYKPTCRDITIAEASKFGTLNDYA
FFDKVRKALRSPDVYENFLRCLTLFNQEIVSKSELQTLVTPFLSRFPDLLKWFQDFLGPP
TATTECVPLASAQRQDRSQSEIATDIDLSTCKRLGASYCALPKSHENVKCSGRTSLCKDV
LNDTWVSFPTWAEDSTFVTSRKTQYEEFIYRCEDERFELDVVIETNSATIRVLEGVQKKL
SRMSPDEVSRFRLDECLGGTSPTIHQRALRRIYGDKAADIIQGLKKNPVVAVPVVLRRLK
TKEEEWREAQKGFNKQWREQNEKYYLKSLDHQGINFKQNDIKSLRSKSLFNEIETLLDER
HEQHEDGVTNPLISGPHLVLPYKDKTILDDAANLLIHHVKRQTGIQKQEKARIKHILRQF
VPDLFFAPRQQLSDDEREEAEDKDMDVDGDNEEENRSSKNGNKNNGSNGSSTSSSSAASS
SAGQDGKEAAATTSSSTAIKEETEGAAKATTTTTSTTEGTPAADAAKRSSTEESGKDSAS
EAAAIKTEIKQENDPDQPASSTSATTPAEEAYTLFFTNNNWYLFLRLHAILCERLRTIYE
RAQIIATEEKAYQSTRTNSTATALRLKPKSEIKVEEFYATFLDMLKNVLDGNMEAGNYED
SLREMFGIHAYIAFTLDRVVQNAVRQLQHCVTERGALECVELFQLEQRKGGAGGLCRTAN
RRVNNELAYQRKAEAALQDENCFKVYIYKIDCRVTIELLETDTEDTAQNFASAQQFSNYV
DRLSNPAATGTGSESGASTAGGGGGTVPGSTTTTAGPNAANSATSVEIKTEKPDEETPTT
GGPRKALFLQRNMRRCKTGCPSPSPPPEKTTSAAATTTTTTSTATTTAKSAVKKESAAVT
PAEKSKTPLAKVADTSPPVVNNNNISGSKKDVDGVTTAPPHPPPVVWNSTGKVKTPPERL
PSSNGDQNYFVDDREQFRLNVNNYKICYVLNKDHIFYKRKSLLRAKETHPKVTQEMHARF
EGVVQRWLDRHVTDAQRADCKDWLMGVNSDLPKGLATVVKRNNDVARTPYMTYSRYRVEK
VAPDHHLS
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcggacgtacggaagagattcagtttgggcagcccccgccgcgggttggtggg
actgccccacatcagcgtatgattacgaccaccatccagccgcataatgctggaccgacg
atccagtaccagatcgcgtcgtcggccgcgtctccggtcagcgtggttggtggcggcaag
acgaccacgaccacgcccgccgatgtggcggccaacctaagccaacagcaggtcgtgcaa
tcgtcccagcaggttccgcagcaatcgctagcgccgtcgcaaccgagcacttacaccacc
ggaatcgcaggcacgaacctggtcaagacaactggccatgcgcaaccgtcggcaccgcag
ccggcccagcagattcacgtcgtcaacacgacgagcgggcaggtacggggtggcaaggta
acacccagcacgggagtaccccagggaactgtcggggcgggcggaggaggaggagcgagt
gtagtcggtggaggtggccaagtgataaccaccctggcgacgaatgttatttcgaatgcg
cagccgcaaccgccgccgccaccaccccaagggcaggcccagttccagcggctcaaggtc
gaagatgcgctcagctatctggaccaggtaaagttccggttcggcaaccagccccaagtg
tacaacgatttcctcgacattatgaaagagttcaaatctcaaagcatcgacacgcccggc
gtcatccagcgggtgtcgaacctcttcaagggccatccggagctgatcgtgggcttcaac
acctttctcccgccggggtacaagattgaggtgcaagccaacgaccagggctacgccttc
caggtgtccgtctcagtgccatcgacctcggccggaacggcggtggcaccgcagccgtca
ccccacaagtacagcaccatcttccaaggtggtggccagatagttcaaaccggaaattcg
gccgtcaatttaatgacctacggtcactcgaccggttcggtgcacacaaccacgatacaa
ccggtcggcccgagcggtcccggctccaacgccaacgcaacgagtatttcaacaattcct
caatcgccgcaaaactttagccgcgatcgcgaacgcaccatctccggcggcagcggagga
ccaactctaccggcgaactccgtcggcgggggcaccaccaccgtcaacgccgtcgcaccc
gactcgagtgtcattgcaagtcaacagcagcaaaatctccatcgaatgatctcccagcaa
gtgattcctcatcctccaccccagcagcagcagcagcagcagcaaccccaacaagctcct
ccccagcaacagcagcaagccccggcggaaccacagggcggcggtgcgaccccgaatcaa
ccagttgaatttaaccatgccatcacctatgtaaacaagattaaaaatcgcttccactcg
caaccggagaagtacaagcgtttcctcgagattctgcacacctaccagaaagagcagaag
atctacaaggaaggtccgcagggcggttgtaacgccggagcgaagcagctgaccgaggcc
gaggtgtacacccaggtcgcgaagctgttcgacaaccaggaggacctgctccgtgagttt
ggccagttcctgccggacgccaccagccatgcaccgtcctcgctacacgccggcggtgcc
aacaagaaccacactttgcatgagcagtcgtcgcaaccgccggtgccaccgcaaccgcac
agcaaaaagatgtccggaagtgtgatgaacgcgagtggcgtgaaagccttcaacagctcg
cacgcggcgaacctgtcccggctgcaggaacgcgactacggccagagtgaaaaggacttt
gcgtccggtggtcccggggctgggggtggtcgtggaagtaacgccggaatcgagaaggag
ccccggaatcacgtgagcaatcaaaagtacgcgcacaacgccgcagccatgcagggaagt
ggcctcggcggaggaaacgccacgaaacgttcgccatcgtaccagtccgtagcgccgatg
ggtggccacggcatgccgccccgggaacgggaaggtccacccacgaaacggtacaaaccc
acctgtcgggacattacgatcgccgaagcgtccaagtttggtacgttgaacgattacgcg
ttcttcgacaaggtgcggaaagcgctgcgaagcccggacgtgtacgaaaactttttgcgc
tgcctaacgctgttcaaccaggagattgtgtccaagtcggagctgcaaacgctcgtcacg
ccattcctgagccggttccccgatctgctcaagtggttccaggacttcctcggaccgccg
acggcgacgaccgagtgcgtcccgttggcttcggcgcaacggcaggaccggtcccagagc
gagattgccaccgatatcgatttgtccacgtgcaagcggctcggcgccagctactgcgcc
ctgcccaagtcgcacgaaaacgtgaaatgctccggccggacgagcctctgcaaggacgta
ctgaacgacacctgggtctcgtttccgacgtgggccgaagattccacctttgtcacgtcg
cgaaaaacgcagtacgaagagttcatctaccggtgcgaggacgaacggttcgagctggac
gtggtgatagaaaccaacagcgcaacgatacgagtgctggagggagtgcagaagaagctc
agccggatgtcgccggacgaggtgagccggttccggctggacgagtgtctcggcggaacg
tcgccgacgattcatcaacgtgcgctgcggcggatatacggcgacaaggcggcggacatt
atccaggggttgaagaagaacccggtggtggcggtgcccgtcgtgctgcggagactcaag
accaaggaggaggagtggcgcgaagcgcaaaagggcttcaacaagcagtggcgcgaacaa
aacgaaaagtactatctcaagtcgctggaccaccagggcatcaacttcaagcagaacgac
atcaaatcgcttcggtcgaaaagtttgttcaacgagattgaaacacttcttgacgagcgc
cacgagcagcacgaggacggagtcacgaacccgttgataagcggtccgcatctggtgctg
ccgtacaaggacaagacgatactggacgacgcggcgaacctgttgattcaccacgtgaag
cgccagacgggcatccagaagcaggagaaggcccgcatcaagcacatcctgcggcagttt
gtgccggatctgttctttgcgccgcggcagcagctcagcgacgacgagcgggaagaagcg
gaagataaggacatggacgtggacggggacaacgaggaagagaatagatcttcgaagaac
ggaaacaagaacaacgggagcaacggttcgtcgacgagcagcagcagtgcggcgagtagt
agtgccggccaggatgggaaggaggccgcggcgacgacttcctcaagtaccgcgataaag
gaagagacggagggtgcggccaaggcgacgacgacgacgacaagtacaacggagggtact
ccggcggcggacgccgcgaagcgatcttcgacagaagaaagtggcaaagacagtgcttcc
gaggcagccgccatcaagacggagatcaagcaggagaacgatccggatcaaccggcgagt
agtacgtccgcgacgacaccggcggaggaagcgtacacgctgttcttcacgaacaacaac
tggtatctgttcctgcggctgcacgcgatcctgtgcgagcggttacggacgatctacgag
cgggcgcagatcatcgcgacggaggagaaggcctaccagagcacgcgcaccaacagcacg
gcgacggccctgcgactgaagcccaagagcgaaatcaaggtggaggagttttacgccacc
ttcctggacatgctgaagaacgtgctggacgggaacatggaggccggcaactacgaggac
tcgctccgggagatgtttggcatccacgcgtacattgcgttcacgctggacagggtcgtt
caaaacgccgtccggcagctgcagcactgcgttacggagaggggtgcgctcgagtgtgtc
gagctgttccagctggagcagcgcaagggcggtgccggtggtctgtgtaggactgcaaat
cggcgcgtcaataatgagctcgcgtaccagcggaaggccgaggcggctctccaggacgag
aactgcttcaaggtgtacatttacaaaatcgactgccgggtgacgatcgagctgctcgag
acggacaccgaggacacggcgcagaactttgccagcgcgcaacagtttagcaactacgtg
gaccggctatcgaacccggcggccaccggcacgggcagtgaaagtggggccagcacggca
ggcggcggcggaggaaccgtcccaggttccaccaccaccacagccggcccgaacgccgcc
aacagcgccaccagcgtggaaataaaaaccgagaaaccggacgaagaaacgcccaccacc
ggtggaccacggaaagccctgttccttcagcgcaacatgcgccggtgtaaaacgggctgt
ccatcgccgtcgcccccaccggaaaagacaacctccgcggcagctacgacaacgacgacg
acttcaaccgcaaccaccacggccaagtcggcggtcaagaaggaatccgcggcggtgacc
ccggcggaaaagagcaaaacgccactggccaaggtcgccgacacgagtccgcccgtcgtc
aacaacaacaacatcagcggcagcaaaaaggacgtcgacggcgttacaaccgcaccaccc
catcctccccccgtggtgtggaacagcacgggcaaggtcaaaacgccgccggagcgacta
ccgagcagcaacggggaccagaactactttgtcgacgaccgagagcagttccggttgaac
gtcaacaactacaaaatttgctacgtcctgaacaaggaccacatcttctacaagcgcaag
tcgctgctgcgggccaaggagacccaccccaaggtgacgcaggagatgcacgcccggttc
gagggggtcgtccagcggtggctcgatcggcacgtgacggacgcgcagcgcgccgactgc
aaagactggctgatgggcgtcaactcggatctgcccaaggggctggccacggtcgtgaag
cggaacaatgacgtggcgcggacgccgtacatgacgtacagccggtaccgggtggagaag
gtcgcgccggatcatcacctgagctag
DBGET
integrated database retrieval system
