Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ005228
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Entry
CpipJ_CPIJ005228 CDS
T01079
Name
(GenBank) exosome complex exonuclease RRP43
KO
K12586
exosome complex component RRP43
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CpipJ_CPIJ005228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ005228
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CpipJ_CPIJ005228
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF4645
Motif
Other DBs
NCBI-ProteinID:
EDS26407
UniProt:
B0WFR3
LinkDB
All DBs
AA seq
274 aa
AA seq
DB search
MDLKTYKKIHPVKYYKDHLESNIRPDGREVGDLRPLAINFGSITSADGSSIVKIGNTTVV
CGIKAELTPPKPVEPETGFLVPNIEISPLCSPKYRPGPPSEEAQVYSCSLADAILNSGCV
NLKDLCITKEKLVWALYCDLVCLDHDGCVFDASVIALVAALHTLTLPRMRHNADTDEREV
LEEEPREALTLSSIPVTTSFAVLCGRIVADPTAEEEALATSTITITICDATLSYINKSGG
EPVEQELLDQCIENAMKREKSVRALIKTMVKNKK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggatcttaaaacttacaaaaaaattcacccggtcaaatactacaaggaccaccttgag
agcaacataaggccggatgggcgggaagtcggcgacctccgcccgctggccattaacttt
ggctcgatcacatcggccgacgggtcgtcgatcgtcaagatcggcaacacgaccgtcgtg
tgcggcatcaaggccgagttgacgcctccgaaaccggtcgagccggaaaccggatttctg
gtgccgaatatcgagatttctccgctgtgctcgcccaagtaccgtccgggaccgcccagc
gaggaggcccaggtttacagctgctcgctggcggacgcaatcttgaactcgggctgtgta
aacttgaaggatctttgcatcacgaaggaaaagctcgtttgggcgttgtactgcgacctg
gtttgcctggaccatgacgggtgcgtgtttgacgcgtcggtgattgcgctggtggctgcc
ctgcacacgctgacactgccgcggatgcgccacaacgcggacacggacgaacgggaggtg
ctggaggaggaaccgcgggaagcgctcacgttgagctcgattccggtgacgacgtcgttt
gcggtgctctgcgggaggattgtggcggatccgacggcggaggaggaggcgctggccacg
tccaccatcacgatcaccatctgtgacgccacgttgagctacatcaacaagagcggcggc
gaaccggtggagcaggaacttctggaccagtgcatcgagaacgccatgaagcgggaaaag
tcggtccgggcgctgatcaagacgatggtgaagaataaaaagtag
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