Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ005294
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Entry
CpipJ_CPIJ005294 CDS
T01079
Name
(GenBank) collagen IV alpha 1 chain
KO
K06237
collagen type IV alpha
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu04382
Cornified envelope formation
cqu04512
ECM-receptor interaction
cqu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
CpipJ_CPIJ005294
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
CpipJ_CPIJ005294
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
CpipJ_CPIJ005294
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cqu04147
]
CpipJ_CPIJ005294
00536 Glycosaminoglycan binding proteins [BR:
cqu00536
]
CpipJ_CPIJ005294
Exosome [BR:
cqu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
CpipJ_CPIJ005294
Glycosaminoglycan binding proteins [BR:
cqu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
CpipJ_CPIJ005294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-ProteinID:
EDS44339
UniProt:
B0WDA4
LinkDB
All DBs
AA seq
1674 aa
AA seq
DB search
MGTPVKWLAHEQFWQDLTGGVGLFNRNDRDYARPPAQPYIDPSYNVIDTVSGAQGPPSRN
CTSGTGCCTPKCFAEKGNRGFPGPPGLQGPKGMQGFTGAEGLPGSKGSKGEPGPIGPLGV
KGDRGREGLPGYPGVPGTNGLPGVAGAPGIPGVDGCNGTDGLPGLPGLKGEPGPRGYPGI
RGDKGEKGEGAREPENYNKGQKGEPGHDGAEGLQGRQGSPGERGSEGRPGQPGIPGPGGP
KGDKGIKGFCIKGIKGEKGEKGVEIGSVSGSETVTGPQGQKGDKGIDGVPGISGEKGQAG
ERGPSGDRGLKGEKGLPGQPGPRVPKVNLEETVRLDCKVFPDRQVLQVVVKDVPVLLDQK
VPAVILVRKVPKVWMDSRVIQDHVVKSVPRAAKAFLDDQVRKVSPDYLGRKGHVDSPVLL
ERKVSEEILVSRELVFLVRRVTPVWQGQKGEAGFKGLMGAPGDAKEGRPGLPGRPGRDGE
KGESGRPGLPGLKGERGDKGEIGGRCSDCRPGMKGEKGERGYDGTPGRPGTPGPSGERGY
PGEMGIDGSPGLRGAPGQKGEPGLAGIPGADGERGESAIVDLNQIKPEKGERGERGEPGP
YGPKGDIGPRGPIGQPGQRGFTGPKGDKGRPGEPGIDGTPGASGRDGTPGKPGESIRGES
GAKGNPGYPGLKGDKGYAGLKGEAGVCASIPPNLEAAVKGPPGAQGEKGFTGPQGPQGDK
GDKGDRGLTGLGGIPGPQGLPGPVRMVILVFLVYLDPRALRVILVCQWLVHLVREVLKDC
VVLKVIVVALVIVETLVSPVLSVILARKVIVELLESLVYLVWLVLRENPVRKVPLVFREL
LVVQGVIGWPGQKGDTGPPGNDGMKGFQGRKGVQGLPGAAGLPGLQGPKGERGEKGDKGE
FGLTGAPGLTGPPGPLGMKGDKGLMGPPGLEGLPGFGGEKGDRGFTGAPGLPGEPGASSE
KGQKGEPGAPGLRGVDGRPGLNGMVGIKGEPGLPGYGRQGATGEKGDRGNPGLDGLAGLN
GQKGDAGVTGFPGIKGDKGISGLPGIPGSPGMDGAPGPEGAPGLAGLNGEKGSKGEAGRI
GERGERGEKGDLGPPGPPGYMGLKGDRGVPGERGTPATVEAIKGDKGESGFPGPVGLPGK
PGLPGLVGDMGLQGPPGAQGQPGFPGPPGLNGLQGMKGDIGLIGEKGEPCPVVKGEKGLP
GRPGKNGRDGGPGPVGEKGDKGLPGLAGPQGMPGLPGPLGRQGEKGDRGDSGIEGRPGKD
GLPGPQGIKGERGFIGEKGNAGPPGFPGPQGEKGDRGRDGRDGFNGPQGMKGDRGPQGLE
GPPGLVGLSGEKGDKGLRGPPGLDGVSGEKGQKGETPVLPPQRKGPPGPPGYDGQKGDKG
LPGLQGPPGIPGAPGAPGEVGLRGIEGARGLQGLRGEIGLEGRPGRDGFPGTPGPKGDPG
AACTHAPDYLTGILLVKHSQSEEIPQCEPGHTKLWDGYSLLYVDGNDYPHNQDLGSAGSC
VRKFSTLPILACGQNNVCNYASRNDRTFWLSTSAPIPMMPVSEHEMRPYISRCTVCEATS
NVIAVHSQSLAIPECPNGWEGLWIGYSFLMHTAVGHGGGGQSLSAPGSCLEDFRATPFIE
CNGGKGHCHYYETQTSFWLVSLEDHQQFERPQQQTLKAGNLLSRISRCQVCTRV
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgggcacccccgttaaatggctggcccatgaacaattctggcaagatctcacgggcggc
gtgggcttgttcaaccgaaacgatcgagactacgcgcgaccaccggcacagccgtacatc
gatcctagctacaatgtgatagacacggtcagtggtgcccaagggccaccttcgcggaac
tgcacctcgggaaccggatgttgtacgccaaagtgtttcgccgaaaagggcaaccgaggt
ttcccgggaccaccgggcttgcaaggccccaagggtatgcaaggattcaccggtgccgaa
ggtttgcctggaagcaagggctccaagggagaaccaggaccgattggaccgctcggagtc
aagggtgaccgaggtcgcgaaggtctgcccggatatccgggtgttcccggaaccaacgga
ctacctggagtagccggtgcaccaggtatccctggtgtcgacggttgcaacggaacggat
ggacttcccggattgcctggtctcaagggtgaacccggtccccgaggttatcctggtatt
cgaggtgacaagggagaaaaaggtgaaggtgctcgtgaaccggaaaactacaacaagggt
caaaagggtgaaccaggccacgatggtgctgaaggtctgcaagggcgacaaggatcaccg
ggtgagcgaggctccgaaggacgaccaggacagcccggtattcctggacccggtggcccc
aaaggtgacaaaggtatcaagggcttctgcatcaagggtatcaagggtgaaaagggtgaa
aaaggtgtcgaaattggatctgtcagtggaagcgaaacggtaactggtccccaaggtcaa
aagggcgacaaaggtatagatggagtgcccggcatttccggcgagaagggacaagctgga
gaacgtggaccttctggcgatcgtggcttgaagggagaaaagggtcttccgggacaacct
ggtcctagagtcccaaaggtgaatctggaagagacggttcggctggattgcaaggtattc
ccggaccgccaggtcctccaggtggtggtgaaggacgtcccggtgctcctggaccaaaag
gtccccgcggttatcctggtccgcaaggtcccaaaggtatggatggattcccgggtgatc
caggaccacgtggtcaagtcggtcccaagggcggccaaggcattcctggacgaccaggtc
cggaaggtttccccggattacctgggccgcaagggccacgtggattccccggtgctcctg
gagcggaaggtctccgaggagatactggtgagccgggagttggtattcctggtcagaagg
gtaaccccggtatggcagggacaaaaaggtgaagctggtttcaagggattgatgggtgct
cctggtgacgcgaaggaaggtcgccctggtctgccaggtagaccgggtcgtgacggagaa
aagggcgagtcaggtcgaccaggtttgccaggactgaagggagaacgtggtgacaaggga
gagatcggaggccgttgttcggactgtaggccaggaatgaaaggcgagaagggagaacga
ggatacgatggaacacctgggcgcccgggtacacctggaccgtccggcgaacgtggttat
cctggagaaatgggtattgatggaagtcctggactgcgtggcgcacctggtcaaaaggga
gagcctggattagccggcatacctggtgctgatggtgagcgcggagaatcggccattgtc
gatctgaatcagatcaaaccggaaaagggcgaacgaggggaacgtggtgaaccaggtccg
tatggtccgaagggagacatcggtcccagaggcccaattggtcaacccggtcagagaggc
ttcacaggtcccaagggagataagggaaggcccggagagccaggaatcgatggaacacct
ggtgcttcaggacgtgacggtactcctggaaagccgggagaatcaatccgaggagaaagt
ggtgctaagggcaacccaggttacccaggtttgaagggtgacaaaggatacgctggtctt
aaaggagaggcaggtgtttgtgcctctattccaccaaatctagaagctgccgttaagggg
cctcctggagcgcaaggcgaaaaaggttttactggtccgcagggtcctcagggcgataag
ggagacaagggagatcgtggtttgactggtcttggtggtattcctggtccgcagggtctt
cctggtccggtaaggatggtaattctggtattcctggtctacctggatccaagggctcta
agggtgatcctggtttgtcaatggttggtccacctggtccgcgaggtgctcaaggattgc
gtggtcctaaaggtgatcgtggtggccctggtgatcgtggagacgttggtcagcccggta
ttgtcggttatcctggcgagaaaggtgatagtggaactcctggaatctctggtttacctg
gtatggttggtcctaagggagaacccggtccgaaaggtcccgctggtcttccgggagctc
ctggtcgtccagggtgttatcggttggccaggacagaaaggtgatacgggtcctcccggt
aacgatggtatgaaaggtttccagggtcgcaagggagttcaaggattacctggtgctgct
ggtcttccaggtttgcagggacctaagggcgaacgtggcgaaaagggcgataaaggagag
ttcggtttgacaggagctccaggtttgacgggtccaccgggacctctcggtatgaagggc
gacaaaggattgatgggcccacctggtcttgaaggtttgcctggattcggcggcgagaag
ggagatcgcgggttcactggtgctccaggtcttcctggtgaacctggtgcgtcttcggag
aagggacaaaagggtgaacctggtgctcctggattacgcggagttgatggacgacctggt
ctgaatggaatggttggaatcaagggtgaacctggcttgcctggatacggaagacaaggt
gctaccggcgaaaagggagatcgcggtaatcccggcttggatggtttggctggtctcaac
ggacaaaagggtgatgctggcgtcactggtttccctggaattaagggcgataagggtatt
tctggtctgccgggtattcctggatctcctggtatggatggtgctccgggtcctgaaggt
gctcctggtctagctggattgaatggcgagaaaggttctaagggtgaggcaggtcgtatt
ggagagcgtggtgagcgaggagaaaagggtgatttgggtcctcctggtccgcctggttat
atgggactgaagggtgatcgaggtgttcctggagagcgtggcacaccggctaccgttgag
gctatcaagggtgacaagggtgagtctggattcccgggtcctgttggactgccaggaaag
cctggattgccaggtttggttggagatatgggtcttcagggtccacctggtgcacaagga
cagccaggtttcccaggaccaccaggattgaacggtcttcagggcatgaagggtgatatt
ggtttgataggagaaaagggtgaaccttgtccggttgttaagggtgagaagggtctgccg
ggacgtccaggcaagaatggtcgcgatggtggtccaggacctgttggggagaagggagac
aagggtttgcctggattggccggaccccaaggtatgcctggtttacctggtccacttgga
agacaaggagaaaagggcgatcgaggagattcaggtattgaaggtcgcccaggaaaggat
ggtctgcctggtcctcagggaattaagggagagcgaggcttcattggtgagaagggtaac
gctggtccaccaggattccctggtccgcaaggtgaaaagggagatcgtggtcgggatggt
cgtgatggattcaatggacctcaaggtatgaagggagatcgtggtccacaaggtttggaa
ggtcctccggggttggttggtttgtctggcgagaagggagacaagggacttcgtggtcct
cctggattagatggtgtttctggtgagaagggtcaaaaaggtgaaaccccagtgttgcca
ccacagcgtaagggtccgcccggtccacctggttacgatggtcagaagggagacaagggc
ttgcctggattgcagggaccacctggtattccgggagctcctggtgctcctggtgaggtc
ggtctgcgtggtatcgaaggtgctcgtggtcttcagggacttcgcggtgaaattggtttg
gaaggtcgtcctggacgtgatggcttccctggaacgcctggtcctaagggagatccggga
gcagcgtgtacgcatgcccctgactatcttaccggaattctgcttgtaaaacacagtcag
tccgaagagattcctcagtgcgaaccgggccacaccaagctgtgggacggttactcgctg
ttgtatgtcgacggaaacgactacccgcacaaccaggatctgggttcggccggttcttgt
gtgcgcaagttctctacgctgccaattttggcttgtggccagaacaacgtctgcaattat
gcctctcgaaacgaccgaactttctggttgtccacctcggcaccgatcccgatgatgccc
gtcagcgagcacgaaatgcgaccgtacatttcgcgctgtacggtgtgcgaggccacttcc
aacgtgatagccgtgcacagccagtcgcttgccattccggagtgtcccaacggctgggag
ggtctgtggatcggctacagtttcttaatgcacactgccgttggccacggtggtggtggc
cagtccctgtcggctccgggctcctgtctggaggacttccgggccacgcccttcatcgag
tgtaacggtggcaagggccactgtcactactacgagacgcagacctcgttctggctcgtt
tcgctcgaggaccaccaacagttcgagcggccacaacagcagaccctcaaggctggtaat
ttgctctcgagaatatcccgatgccaggtgtgcacccgcgtctag
DBGET
integrated database retrieval system
