Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ005295
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Entry
CpipJ_CPIJ005295 CDS
T01079
Name
(GenBank) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu04382
Cornified envelope formation
cqu04512
ECM-receptor interaction
cqu04518
Integrin signaling
cqu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
CpipJ_CPIJ005295
04518 Integrin signaling
CpipJ_CPIJ005295
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
CpipJ_CPIJ005295
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
CpipJ_CPIJ005295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cqu04147
]
CpipJ_CPIJ005295
00536 Glycosaminoglycan binding proteins [BR:
cqu00536
]
CpipJ_CPIJ005295
Exosome [BR:
cqu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
CpipJ_CPIJ005295
Glycosaminoglycan binding proteins [BR:
cqu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
CpipJ_CPIJ005295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-ProteinID:
EDS44340
UniProt:
B0WDA5
LinkDB
All DBs
AA seq
1785 aa
AA seq
DB search
MSFAGRGKVDFTRLTDARMLLDFVILAVCNRTECDCKGLKGAPGQIGPHGVPGAAGLPGD
IGFDGPPGYSGERGVRGEFGSTGDKGYRGDTGPRGPVGYPGIPGLPGDDGPRGPRGIDGC
NGTDGAMGIPGMPGWPGDRGQPGLQGPIGFRGDSGEGGINSKGTKGSIGESGRPGITGAD
GFKGNRGLPGIDGINGIDGAVGPKGELGDEGEPSIPFCPGEPGEPGEPLYYFSSKNSTVN
KGISGPKGDNGADGLPGIPGRKGDTGGYGERGLKGFKGEEGNVGDRGKQGKDGPPGPSGE
KGEKGAPGFAGRDGELGDKGEPGDDGRSGLPGTQGVRGPPGLYDPNLAPIVIGPVGPQGD
VGAAGNQGLGGIPGNPGRRGLMGLQGPPGDPGIDGPRGKKGTTIAGQLGDDGESGPRGQV
GPRGVSGPAGTKGPKGYPGRSILGEKGESGLPGLNGEYGDKGDQGEIGITGDKGLPGIGY
NITGPPGPDGIPGMQGPPGEAGWNGYDGSKGDRGFRGEDCGICPPGPRGIKGEGGDIGRP
GWEGFDGNRGLPGPRGLKGGPGKPGPQGIPGLQGNPGENGEPGRPGMKGAKGEVIRVGNM
VHFPGDKGEMGMFGLQGQQGDVGLAGEPGERGFPGEQGLFGDDGSPGLRGRDGDPGLPGR
DGVHGRNAVYNAYNMWGLKGSQGPPGDDGTPGERGDQGDRGERGATAEFDYLITGDKGVR
GDFGDEGPFGEPGYRGEIGDEGFRGAPGVQGSVGDSIQGPIGYKGYFGIIGDHGLQGEDG
FPGMPGVDGPPGLPGLKGQRGDPGRAVLFGEKGEEGEAGYFGEFGDKGFKGMEGYRGAPG
ITGPKGEKGDDGVMGRIGLPGNKGMVGDFIYGDRGAPGADGTPGRTAPYGDKGERGEPGI
EGPSGPKGEIGDTGRDGLPGFAGDEGEPGEPGLRGIHGYMGGEGDQGERGEVGDQGNIGL
TGRRGLVGLRGEKGEIGDLGDIGFPGRFGRNGTKGERGDEGFAGVRGPKGSGSFSGHKGE
PGIFGLRGPPGLDGMPGLFGMKGEEGEAGNVIDGTPGLKGPKGAPGFNGRSGLPGLKGER
GDEGRFGSKGIQGDKGRDGYPGIPGRRGKDGLRGLPGLRGLSGSRGEQGEEGDFGYVGFV
GDKGERGDIGRIGLPGIEGMLGDPGFKGLPGELIFRSPAKGDRGDSGFPGPEGMPGIQGV
KGRIGYPGTKGEPGLRGEPGFAGRNGLDGLKGQQGDRGYKGPRGTLDIRPEQGDQGESGY
DGFPGRLGLRGSKGAPGDYGDDGPPGPRGEVGMVSGAFKGIKGEVGFEGAPGLEGLPGLP
GPQGMSGAPGEKGLSGSIGISLRGLKGVAGDDGLIGLDGMPGPLGFVGEVGLPGRPGMRG
FPGIKGEFGDVGEDGYYGRLGLKGVKGERGDPIPLDDWRPNQPGERGVPGNKGAPGDEGD
MGLPGYPGLIGLKGERGLQGLDGEEGQMGFKGERGFQGAPGRDGLDGYPGIRGEIGDPAP
PPPPPKSRGYIFTKHSQTVHIPDCPLNTIKLWDGYSLVSVIGSSRSVGQDLGSAGSCMRK
FSTMPYLFCDINNVCNYATNNDDSIWLASPEPMPMSMAPMKSREVAQYISRCSVCETTTR
VIAVHSQTMAIPDCPGGWEELWIGYSYVMHTTDNSGGFGMDLTSPGSCLEEFRAQPVIEC
HGHGTCNFYDGITSFWLTIIEDGEEFNQPKQQTLKADQTSKISRCIVCRRKAGFLRVLSD
GGISASALRRPDIATVQKPYYPPPPPQPPRRRIRPGSRQRNRNSG
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgctggcagaggaaaggttgatttcacgcgactgactgatgcacgaatgctt
ctcgattttgtaattctcgcggtctgcaaccgaacggaatgtgactgcaagggactgaag
ggagcccccggacagattggaccacatggcgtgccgggagcggccggtcttcccggtgac
attggctttgacggacctccgggttattccggagagcgaggtgtccgcggtgaatttggt
tccacgggcgacaagggttaccggggtgacaccggacctcgtggaccggttggatatccg
ggaattccgggtctgccgggtgatgatggaccgaggggccctcgaggaattgacgggtgc
aatggaaccgacggtgcaatgggaattccgggtatgcctggctggccaggagaccgtggt
caaccaggtttgcagggacctatcggttttcgcggagactcaggcgagggaggtataaac
tccaagggaacgaagggttcgataggcgaatcaggaagacccggaataacaggtgccgac
ggattcaagggtaaccgtggattgcccggaatcgatggcatcaacggtatagatggcgca
gtaggcccgaaaggagaactaggtgacgagggggaaccatccattccgttctgtcctgga
gagcccggagaacctggtgaaccgctgtactacttttcgagcaaaaactcaactgtcaac
aagggtatcagtggtccgaagggtgataacggagcggacggtttgccgggtattccaggc
cgaaaaggagataccggtggctacggtgagcgtggcctcaagggcttcaagggcgaagaa
ggtaacgttggagaccgtggaaagcaaggaaaggatggtccacctggaccgtccggagaa
aagggtgaaaaaggtgctccaggattcgctggtagagacggagaacttggagataagggt
gaacccggtgacgatggtcgttctggattgcccggaacgcaaggtgtccgaggaccgccc
ggattatacgatccaaatctggcaccaattgttatcggcccagtaggaccacaaggagac
gtaggcgctgccggcaaccaaggcttgggaggaatccctggcaatccaggcagacgtggt
ctcatgggtttgcagggtcctcctggtgatccaggtattgatggaccacgtggtaagaaa
ggcacaacgattgctggacagcttggcgacgacggtgaaagtggacctcgtggtcaagtg
ggccctcgtggagtttctggtccagcgggtactaaaggtcccaagggatatcccggcaga
agcattcttggcgaaaagggagaatctggattgccaggacttaacggagaatacggcgac
aagggtgaccaaggtgaaatcggcataacgggcgataaaggtctaccaggaattggatac
aacattaccggtccacccggaccagacggaattcctggcatgcagggtcctccgggagaa
gcgggctggaatgggtacgatggctcaaaaggagatagaggtttccgtggtgaagactgt
ggaatatgtcctcctggacccaggggcatcaagggtgagggaggtgacattggtaggccc
ggatgggaaggattcgatggaaatcgaggcttgccaggaccacgaggcttgaagggcgga
cctggtaaacctggaccacagggaattccaggacttcaaggaaatcctggagaaaacggc
gaaccaggtcggccaggtatgaagggagcgaaaggagaggtcatccgcgtgggcaacatg
gtgcacttcccgggagataagggtgagatgggcatgttcggtctgcaaggtcagcaagga
gacgtgggattggctggagaaccgggcgaacgcggcttccctggcgagcaaggtctcttc
ggagacgatggcagtcccggtttgcgaggtcgtgacggtgatcctggtctacctggtcgg
gacggagttcatggcagaaatgcagtgtacaacgcctacaacatgtgggggctgaaggga
tcgcaaggtcctccgggagatgacggtactccaggcgagcgaggagatcaaggagatcgc
ggtgagcgaggtgccacagctgagtttgactacctcataacgggcgataagggcgtacgg
ggagacttcggcgacgaaggaccttttggtgagcccggctatcgtggagaaattggagat
gaaggtttcagaggcgccccaggtgtccagggatcggtcggtgacagcattcagggtccg
attggatacaagggatactttggcattatcggtgatcatggtctgcaaggtgaagatggt
tttcccggtatgcccggcgtcgacggccctcccggattgcccggtttgaagggccaaaga
ggtgaccccggacgggccgtgttgttcggcgaaaagggagaagagggtgaagcgggttat
ttcggagagttcggagacaaaggattcaaaggaatggaaggttatcgcggtgctcctggt
attaccggtccaaaaggtgaaaagggcgacgatggcgtgatggggagaattggattacct
ggaaacaagggtatggtcggagattttatttatggtgacaggggtgcacctggtgctgat
ggaacccctggaagaactgctccctatggtgacaaaggagaacggggtgaaccaggaata
gaaggaccttctggacccaagggagagattggcgacactggtagagacgggcttcctgga
tttgcaggagatgagggagaacctggtgagccaggtttacgaggcatccacggatatatg
ggcggagaaggcgaccaaggtgaacggggtgaagtaggagatcaaggaaatatcggtttg
accggtcgacgtggcttggttggcctgcggggtgaaaagggcgaaattggcgaccttggt
gatattggtttccctggaagatttggtcgtaacggaaccaagggagaacgtggtgacgaa
ggtttcgctggcgtgagaggtcccaagggatctggttcgttcagcggccataaaggagaa
cctggaatttttggacttcgcggaccaccaggattggacggtatgcctggtctgtttggc
atgaagggcgaagaaggtgaagctggaaatgtgatcgacggcacccctggactcaaaggt
cctaagggagcaccaggattcaacggccgttctgggcttccgggattaaagggcgaacgc
ggtgacgaaggaaggttcggttcgaaaggcatccaaggtgataagggacgcgatggatat
ccaggtattccaggacgacgtggaaaggatggtctccgtggattaccgggattgcgagga
ctctccggaagcagaggagaacaaggcgaagagggagactttggatatgttggattcgtt
ggagacaagggtgaacgcggagacatcggccgtatcggtctgccaggaattgaaggcatg
ttgggtgatccaggcttcaaaggtttaccaggagagcttatcttcagatcaccagcgaag
ggagatcgtggcgattcaggattccctggcccggaaggaatgcctggcatacaaggagtc
aagggacgaattggatatcccggcacgaaaggagagcctggtcttcgaggagaacccggt
tttgcaggaaggaatggtttggatggactgaagggacaacaaggagaccgtggctacaaa
ggtccacgtggtacactggacattcgaccagaacagggagatcaaggagaatccggctat
gatggcttcccgggacgtcttggcctacgcggcagtaagggagctcccggagattacgga
gatgatggtccgccaggtccacggggagaagttggaatggtcagcggagccttcaagggc
attaagggtgaagttggattcgaaggcgctcctggcttggaaggattgcctggactcccc
ggtcctcaaggaatgtctggagctcctggtgaaaagggtctctcgggaagcattggaatc
tcgttgcgtggtctaaagggcgtagccggagatgatggtttgatcggcctcgacggaatg
cccggcccactaggattcgtcggtgaagttggtcttccaggacgacctggcatgcgagga
ttcccaggtatcaagggcgaattcggagatgttggagaagatggatactacggcagactg
ggacttaaaggagtcaaaggtgaacgaggagatccgattcctttggatgactggcgacca
aatcagcctggtgaacgcggagttcccggaaataagggagcaccaggagatgaaggagat
atgggacttccaggctaccctggactcattggattgaagggtgagcgaggattacaagga
cttgatggtgaagaaggtcagatgggtttcaagggagagagaggtttccaaggagctcca
ggacgcgatggtttggacggatatcccggaattagaggagagattggtgatccagctcct
cctccaccaccgccaaagagccgtggatacattttcaccaaacactcacagaccgtccac
attccggactgcccgttgaataccatcaaattgtgggatggttattcgctggtgagcgtt
attggaagtagccgttctgtgggacaagatctaggctctgccgggtcatgcatgcgcaag
ttcagcaccatgccgtacctgttctgtgacatcaacaacgtctgtaattatgccacgaat
aacgacgacagcatttggctggcctctccagaacccatgccgatgtctatggcaccgatg
aagtcccgcgaggtcgcccagtacatttcgagatgttccgtgtgcgaaaccactacacga
gtcatcgctgtccatagccaaaccatggcaattcctgactgtcccggaggctgggaagaa
ttgtggatcggatacagttacgtaatgcacaccaccgacaacagcggaggcttcggtatg
gacctgacgtcacctggttcctgcttggaagagttccgcgcccaaccggtgatcgagtgt
cacggccatggaacgtgtaacttctacgacggtatcacctcgttctggctgacgatcatc
gaggatggcgaagagttcaaccagccgaagcagcaaacgctcaaggccgatcaaaccagc
aagattagcaggtgcatagtttgccgccgcaaggccggattcctgcgggttctctcggat
ggtggcatcagcgcgtcggcgcttcgtcgtccggacattgcgaccgtccagaagccgtac
tacccgccaccaccgccgcagcctccgagacggcgaattaggccgggaagccgacagcga
aaccgtaacagtggttaa
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integrated database retrieval system
