Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ005354
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Entry
CpipJ_CPIJ005354 CDS
T01079
Name
(GenBank) conserved hypothetical protein
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CpipJ_CPIJ005354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ005354
Enzymes [BR:
cqu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
CpipJ_CPIJ005354
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CpipJ_CPIJ005354
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CpipJ_CPIJ005354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
LRR_1
LRR_LRWD1
LRR_9
SH3_AEBP2_C
Motif
Other DBs
NCBI-ProteinID:
EDS44621
UniProt:
B0WDL2
LinkDB
All DBs
AA seq
323 aa
AA seq
DB search
MKIETKFIPFQHGDPSTSRPKIRPEASTSASRLQQQPPPHRIAHLDTAAAASCPPLLATV
VVATTGSKSSAKPAPTPLTVKVHNPETTPPKKMSRNKDKYDNNNPRRQQTFLTAEDIASG
KKTCWHGVEITGSVRNLSPTLWKFEHLTALYLNDNCLMRLPHQIGQLVNLRTLDLSSNKL
RSLPAELGELIQLRELLLNNNLLRVLPYELGKLFHLHVLGLHGNPLGKDVMSIYNEPNGT
NKLLTYMLDNLSGFGRRDRINRNHHRGRGERKICARGKRTNERTKVKVKVVWTPTDQAND
SWAVGLGVRLWGSLLVGKSLLMT
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgaaacaaagtttattccgtttcagcacggagatccatctacgtcgcggccc
aagatacgtccggaagcgtcaaccagcgccagccgcttgcagcagcagccgccaccgcac
cgcattgcccaccttgacacggccgcagcagcgtcgtgtcctcctcttcttgccaccgtc
gtcgtcgccaccaccgggtcgaaaagttccgcgaaacccgctccaacgccgctgacggtg
aaggtgcacaatccggagacaacgccgccgaagaagatgtcccgaaataaagacaagtac
gacaacaacaacccccggcggcagcagacgtttctcacggcggaggacatcgcgtccggc
aagaagacctgctggcacggcgtcgagataaccggcagcgtgcgcaacctcagcccgacg
ctgtggaagtttgagcacctgaccgcgctctacctgaacgacaactgtctgatgcggctg
ccgcaccagatcggccagctcgtcaacctgcgcacgctggacctgtccagcaacaagctg
cgcagcctgccggccgagctgggcgagctgatacagctgcgggagctcctgctgaacaac
aacctgctgcgggtgctgccgtacgagctcggcaagctgttccatctgcacgtgctcggg
ctgcacgggaacccgctcggcaaggacgtcatgtcgatctacaacgagccgaacggaacg
aacaagctgctcacgtacatgctcgataatctgtcaggttttggccgccgagaccgcatc
aaccggaaccaccaccgcggcagaggagaaagaaagatctgtgcacggggcaaacgaacg
aacgagcgaacgaaagtgaaagtgaaagttgtgtggacgccaaccgaccaagccaatgac
tcatgggcggttggtttgggagtccggttgtggggttcgctgctggttggcaagtccctg
ctcatgacatga
DBGET
integrated database retrieval system
