Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ006186
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Entry
CpipJ_CPIJ006186 CDS
T01079
Name
(GenBank) helicase with zinc finger
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ006186
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
CpipJ_CPIJ006186
3'-5' decay
Other 3'-5' decay factors
CpipJ_CPIJ006186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
ResIII
AAA_19
zf-CCCH
PAM2
AAA_22
UvrD-helicase
zf-C2H2_2
PhoH
AAA_14
YfiO
zf-C2H2_4
Motif
Other DBs
NCBI-ProteinID:
EDS26531
UniProt:
B0WFZ6
LinkDB
All DBs
AA seq
2054 aa
AA seq
DB search
MSESQASEHLRNRQWQQAKDIYDQLLSESSPGSFKLPKERTIACLYGRTECCLELKEYES
VAHDCHCLLKLLANNNESRASGSTSPVPSSASSTSSTSSSSTANQQNPTATTESKVRKRL
IHSLYKQQKYAEAEVILQEWAANHNYHQDINRYLERLKSVLQMASANSSPTPALDGSASA
APAAATTDSDTSSLSQGPSTTPTSTISSLSSLNEEYEQIETKLENLIINNLPPDRYTKQL
NQLNNNGSSDSSSPTRENNKSSSEREAEAGETTVSNGNAETDVASTTAADTNEQEAVKPE
EGETSESAAPATSSANSSSSSVNNFQKQLDKISNISCVYCTMNFSDRSELRAHCQTQSHQ
NIIMSDEGRDWMWRPPPRGFIAESYSLCENFVDNQTCHYGNQCVEAHGIDELNEWKERFE
YRKKKLQRARDKELYGKSYTEQLLERWVLAPSPDKVMKEKVEGVEESCSQDLVTTVSSKV
SKREWTFVLKTRRLLKAVALLQDAHRNHFLIKQIYPGEPRSGRPAGNKVVEAELTSDQEW
VAPMDAPKVEAIEPSSPMLEHRVKVVFNTDIYGTFRQAVVFDFGSEPVLVKHICVDVVPV
TEVDKIQEIRKDIVMSTSERWDETNSEIIEFTTTIIPHMQTPAYAADAEREKELLARYPL
PKASSFVLTQSTITEKKLTKNNYRNRIHELLYVEEIARYEQIARYNLTTRLTIATNYLLT
PSGMATSTAKYSHSGELFALMKLGKDVSEDTSAGRLILNNCQAVLISSKDPAPTGEKRKV
YEAVIEDKGKNMIYLKISAKAVAGLGLKAETEFISDIQFQPNRLTYCEWHHAIDKIADFR
IIFPDIYLEPSIPWTPQRQWDASLDPKLNSKQKEAVVAITTPITVALPPILLIGPFGTGK
TYTLAQAIKQLLLQPESKILICTHSNSAADLYIKDYLHPWVEEGMEEAKPLRVYYHKRWV
ATVNSIVQKYCLIDLNINVRNFRRPTVEDILKYRIVVVTLNISMELASLDLPKGHFTHIF
LDEAAQAMECEAIMPLALATEKTRIVLAGDHMQMSPELFSNFAKERKLHISLLERLYDHY
PNDFPCKILLCENYRAHEAIIKFTSELFYEQKLIASGKQPRHEKFYPLTFFTTRGEDVQD
KNSTAFYNNSEVYEVVERVCELRKKWPSSWGKINDQSIGIMTPYADQVFRIRSELRKRRM
GGISVERVLNVQGKQFRAIFLSTVRTRRTCNTNANENSSSSSSEDVDYGFLSNSKLLNTA
ITRAQSLVAVVGDPVALCSIGRCRKVWERFIEICYQNKSLFGITWSLLRSQLDGVELKKT
YVLNPLAPEFIPRALQAEAYLREQAANVTGQYLQQPPHQAGPHSTGFHHQSNANYSGGGH
PSLPAAGLMRQIVPQQPMPTPQAPFMGHGPGPGGGHGGHPPIPPQTQQQFPPYQSPMFFA
AQQPPTRGPPPPHPNALGPPVPPNIAAQAGPANFPQNNPANLWNPAGSGHFPNRTRQQIR
PQMAQHLTASGRPLIPPPMRSPVQQQQQQQQQQQQQQLSAPQMPYLQQPKPALPNYGPFP
PHHQPQHPPHQLHQNHIRPVMGGGGGGGGGGGPISPSSYQQQQQQDQQHYLSGLSTDLMA
SITARAASQMQMPPQQQQQQQQQVVAAVHQQQSLLHQQQSQQKFGALRMDDGRQQQQQHG
GLVDKDIQFLQNVHFPEKYSQVTPPQHVHHSNTAAVTDFNHLLPPNMSFLDVSLQTKEFQ
YLWFIKLVETQGLEAANKFTDILRQVPTLAKDVLGSVSLQPPAALLHHQQQQQQHQQMAA
ASSGISNGNALLGGGMPGKSLLENVELFGPASELQSFGGSSAPLVAAPPQQQQSVPLYRR
QAGQNYQSSSSGTLPSASNSSQSIASSTPDLLDNHLQQSLFETLDGPGKLHHSNAMLFGG
QFGGGGSTTDQSNNLQGFTSIHNIAAGLMQQQHNLNNREFLHQLQQQQQQQQQQHLHDGR
GGSSVEELLNRQAANQTYASVLSQGGGKQKDGSGGGGLGGLGDGSGAGSSALGDPFAALR
DLGRKSNGYYNYFQ
NT seq
6165 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagagtcaagccagtgagcatctccggaaccgacagtggcaacaggcgaaagat
atctacgatcagcttctgagcgaatcttcgccgggcagcttcaagcttccgaaggagcgt
acgatcgcatgtctgtacggtcgaaccgagtgctgtctggagttgaaagagtacgagtcc
gttgcccacgattgtcactgtttgctgaagcttctggcgaacaacaatgaaagccgtgct
tcgggttctacgagtcccgttccgtcttcagcgtcatctacatcttcgaccagcagttcc
tcgacggccaaccaacaaaatccgacggccacgaccgagtctaaggtccgcaagcgtctc
atccattcgctttacaaacagcaaaagtatgccgaagcggaagtaattctgcaggagtgg
gccgccaaccataactaccatcaggacatcaatcgctacttggagcgcttaaaatccgtg
ctacaaatggcatcggccaactcgtcacctacgcccgctctcgacggatctgcttcggca
gcacctgccgctgccacgacagattccgacacgtcgtcgttgtcgcagggaccgtcgacg
acgcccacttcgaccatctcttcactgtcttcgctcaacgaagagtacgaacagatcgag
acgaagctggaaaatctcatcatcaacaatctgccgcccgatcggtacaccaagcagctg
aatcagttgaacaacaacggcagcagcgattcgtcgagtcctacgcgggagaacaacaag
tcgagcagcgaacgggaagcggaagccggtgaaaccacggttagcaatggcaatgcggaa
accgacgtcgcttcgacaacggccgcggacacgaacgaacaggaagctgtgaagccggaa
gaaggtgaaacgagcgaatctgcggctccagcgacgagcagcgccaatagcagcagttcc
tcggtcaacaacttccagaagcagctggataagatcagcaacattagctgcgtctactgc
acgatgaactttagcgaccggtctgagttgcgggcccattgccagacgcagagtcaccag
aacattatcatgtcggacgaaggtcgtgactggatgtggcgtccgccgccgcgtggcttc
atcgccgagtcgtacagcctgtgcgagaacttcgtggacaaccagacctgccactacggc
aatcagtgcgtcgaagcgcatggtatcgacgagctgaacgagtggaaggaacggttcgag
taccggaagaagaagttgcagcgcgcccgggacaaggaactgtacggcaaaagctacacc
gagcagctgctggaacgctgggtgttggcaccaagcccggacaaggtgatgaaggagaag
gtggagggcgttgaggagtcgtgctcgcaggacctcgtcacgacggtcagctccaaggtg
agcaaacgcgagtggacatttgtactgaaaacgaggagactgttgaaggcggtagcattg
ctgcaggacgcgcatcgcaatcattttcttatcaagcaaatctatccgggcgaaccgaga
agtggccgtcccgcaggcaacaaagtggtggaagccgagttgacgtccgaccaggagtgg
gtcgcaccgatggacgcaccaaaggttgaagcgattgaaccgagcagtcccatgctggag
caccgggtcaaggtggtgttcaacacggatatttacggtacgttccgccaggcggtggtc
ttcgactttggcagtgaaccggtgctggtgaagcacatctgcgtcgacgtggtccccgtt
acggaggtcgacaagattcaggagattcgcaaggacattgtgatgtcaacgtcggaacgg
tgggacgaaaccaactcggagataatcgaattcaccaccaccataattccgcacatgcaa
actccggcttatgccgcagacgccgagcgggagaaggaactgcttgcgagatatccactg
ccgaaggcatcgtcctttgtgctgacgcaatccacgatcacggagaagaagctgacgaag
aacaactaccgaaatcggatccacgagctgctgtacgtggaggagattgcccgttatgag
caaattgcccgctacaacttgaccacccgattgacgatcgcgaccaactatctgttgacg
cccagcggaatggccaccagcacggccaagtattctcactctggtgagctgtttgcgctg
atgaagctcggcaaggacgtctccgaggacacttcggccggtcggctcatcctgaacaac
tgtcaagccgtgctgatttcttcgaaagacccggctccaacgggtgaaaagcgcaaggtg
tacgaagccgtgatcgaggacaaagggaagaacatgatctacctgaagatttcggcaaaa
gccgtggccgggctcggactgaaggcggaaaccgagttcatctcggacatccagtttcaa
ccgaaccgactgacgtactgcgagtggcaccacgcgatcgacaaaatcgccgacttccgg
atcatcttcccggacatctacctggaaccgagcatcccgtggactccgcagcgccaatgg
gacgcgtcactcgatccgaagctcaattcgaagcaaaaggaggccgtcgtcgccatcacg
acgcccattacggtcgcgctgcctccgatcctgctgattgggccctttggcaccggcaag
acgtacacgctggcgcaggccatcaaacagctgctgctgcagccggagtcgaagattctc
atctgcacccactcgaactcggccgccgatttgtacatcaaggactacctgcacccgtgg
gtcgaggagggcatggaggaggccaaaccgttgcgcgtgtactaccacaagcgatgggtc
gccaccgtcaacagcatcgtccaaaagtactgtctgatcgatctgaatatcaacgtgcgc
aacttccggcggccaaccgtcgaggacatcctcaagtaccgcatcgtggtggtgacgctg
aacatatcgatggagctcgcttcgctcgatctgcccaagggtcactttacgcacattttt
ctggacgaagcggcccaggccatggagtgcgaggcgatcatgccgttggcgctggcgacg
gagaagacgcgcatcgtgctggccggtgaccacatgcaaatgtccccggagctgttttcg
aactttgccaaggagcgcaagttgcacatttcgctgctggagcggctgtacgatcactac
ccgaacgatttcccgtgcaagatcttgctgtgcgaaaactaccgagcgcacgaggcgatc
atcaagtttacgtcggagctgttctacgagcagaagctgatcgcgtccggcaagcagccg
aggcatgaaaagttctacccgttgacgttctttacgacgcgcggcgaggacgtgcaggac
aagaactcgacggcgttctacaacaactcggaggtgtacgaggtggtggagcgggtgtgc
gagctgcgcaagaagtggcccagttcgtgggggaagattaacgaccagagcattggaatc
atgacgccgtacgcggatcaggtgtttcgaattcggtccgagctgaggaaacgtcgcatg
ggtggaatcagcgtggagcgagtgctgaacgtgcagggtaagcagttccgggcgatcttt
ctgtccacggtgagaacgagacgcacctgcaacacgaacgccaacgagaacagcagcagc
agctcttcggaggacgtggactatggctttctcagcaattccaagctgctcaacacggcc
atcactcgtgcccagagtctggtcgccgttgttggagatccggttgcgctgtgttcgatt
ggacggtgtcgaaaggtgtgggaacggttcatcgagatctgctaccagaacaagagtctg
tttggcatcacttggtccttgctgagatcgcaactggacggtgttgagttgaagaagacg
tacgtgcttaacccactggcgccggaatttattcctcgtgccctgcaagctgaggcgtac
cttcgggaacaggccgcaaatgtgactgggcagtatctccagcagccaccgcaccaggcc
ggaccacattcgaccggattccatcatcaatcgaacgcgaactattccggcggaggacat
ccgtcactgccggcggcaggcctcatgcgacaaatcgtgccccagcaaccgatgccaacg
ccgcaggctcccttcatgggacacggacccggtcccggtggtggccacggtggtcatccg
ccgattccgccccaaacgcaacaacagttcccgccctaccagagtccgatgttctttgcg
gcgcagcaaccgccgacgcggggtccaccgccaccgcatccgaacgccctcgggccgccg
gttcctccgaacatcgcagcccaggctggccccgccaatttcccccagaacaacccggcg
aacctgtggaaccctgcagggagtggccactttcccaacagaacccgccagcagattcgt
ccccagatggcacagcacctgacggccagcggccgaccgttgattcccccaccgatgagg
agtccggtccagcagcagcagcagcaacaacaacagcaacaacaacagcagctgtctgcg
ccgcaaatgccttatctccagcagccgaagccagcccttccgaactacggcccattcccg
ccccaccaccagccccaacatccgccccatcagctgcaccagaaccacattcgcccggtg
atgggagggggtggtggcggtggcggcggaggcggtcccatcagcccaagttcgtaccaa
cagcaacagcagcaagatcagcaacactacctgtccggactgtctaccgacttgatggca
tcgattacggcccgtgccgcttcgcaaatgcaaatgcccccacagcagcagcagcagcag
caacagcaagttgtggcggcggtgcaccaacagcaatctctgcttcatcaacagcagagc
cagcaaaagtttggggcgcttcggatggacgatggacggcagcagcagcagcagcacggt
gggctcgtcgacaaggacattcagtttctgcagaatgtgcactttccggaaaagtacagc
caggtcacgccgccgcagcatgtgcaccattccaacacggccgccgttacggactttaac
cacttgctgccgcccaacatgagctttctggacgtgtcgctgcagacgaaggagttccag
tatctgtggttcatcaagctcgtcgagacgcaggggttggaggcggcgaacaagtttacg
gacattttgcgccaggttccgacgctggccaaggacgtgttgggctcggtcagtttgcag
ccaccggcggccttgctgcatcatcaacagcagcagcagcaacatcagcagatggcggcg
gcctccagtggaatcagcaacggaaatgccctgctcggaggaggaatgccagggaagagc
ttgctggagaatgtggaactgtttggcccggccagcgagttgcagtcgtttggtggctcg
agtgcaccgttggtcgccgcgcctccgcagcagcagcagtcggttccgctgtaccgtcgc
caggctggccagaactatcagagcagcagcagcggtacgctcccgtcggcgtccaactcg
tcccaatcgattgcctcgtcaacgccggacctgctggacaaccatctgcagcagtcgctg
tttgaaacgctcgatggaccgggcaagcttcaccacagcaacgccatgctgtttgggggt
cagtttggtggcggcggctccacaaccgaccagtccaacaacctgcagggcttcacctcg
atccacaacattgcggccggtctgatgcagcagcaacacaatctcaacaaccgcgaattc
cttcaccagctccaacagcaacagcaacaacagcagcagcaacatttgcatgacggtcgc
ggcggttcgtccgtggaggaactgctcaaccggcaggccgccaaccagacgtacgcgagc
gtgctcagccagggcggtggcaagcaaaaggacggaagtggcggtggcggcctcggtggg
ctcggcgacggcagcggcgcgggctcgtccgccctgggcgatccgtttgcggctctgcgc
gatctgggccggaaaagcaacggctattacaactactttcagtaa
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integrated database retrieval system
