Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ006427
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Entry
CpipJ_CPIJ006427 CDS
T01079
Name
(GenBank) smg-7
KO
K11125
protein SMG5
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CpipJ_CPIJ006427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ006427
03032 DNA replication proteins [BR:
cqu03032
]
CpipJ_CPIJ006427
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
CpipJ_CPIJ006427
mRNA cycle factors
Common to processing body (P body) and stress granule
CpipJ_CPIJ006427
DNA replication proteins [BR:
cqu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
CpipJ_CPIJ006427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-ProteinID:
EDS28025
UniProt:
B0WHW6
LinkDB
All DBs
AA seq
1092 aa
AA seq
DB search
MTVYIRSVYTLVKQQDERKGALTLATLATEPAFLEEHRQLVARCVTLLFEDFETVGKKAR
EILWRKGYYDLITVFKKHALQLAQQRKSALRGDELARVAADEVLLRQGVERLLLDGVNHL
KVIVLRLGQIFNLDRLRYVVSYELLENYDDELLVRESSCYENLNLKEERSEEEKKVIYTK
QEISFALESVHALLTSLGDLHRYYCEFGLDGLSNVKEVTASYYWEAFKLNTKVGITQNQL
GTLYNGRNYNLDSVYHYLYSLCCPIPFECSEPNVSRIFQKNIRYLESNGGADVEEEDYAV
REFMAKFLLVVDVFFYDKSVSDFTSLCHSVLIDFKNVLGARRLVDDEYYMTDEFIFKIVS
ILFFCMYRLQLNSSEKIYSLNAFMVALCSELLEYCTMAVEKYVVENVREDKKFRELYTAM
YQRYDDEVRRSRQMVKDGTAGGIFTKDQKSSSGVEEGNGSEDHSNKENDERKSQASSGKQ
GGGLKKKHARRRRRAMSNESESELSDDTSDCQLDSDSGEDDDDEEDDDGDSISSFESYDD
FSDEEDEVEQRNESFGERNGNEPVELQRAEEANNNLDQNQTASVQLKFKKRYHKLNPNVV
IEFAEQERTMRSLKLLFDWLHTNLDILIGCYQSNPEFLHNIMKLLNHFNIDIFSNRYFFP
RELITAPAIREDFRQLFEARRGIPLQEDIAMKRFPLFDAAQEGLDWETNYRLGVTPSEQS
FLRVMKLVDFGFSLCKSKKFEYAFCPKSRDFSLKSTKQTKQQQRGGKREELNRRVVGVHK
ELVGTNRAARRREQQEEKRRAKKLVQREERGQREREPRTRRNRNRQNAGRVGGLGSGGEG
QRSSQEGEGKFAAPAIITKKGYLKNRGLTLRNRKEPVDSGHSESTADEGGVVAGQRGEEK
NINELMGQLWLRDEVKKLETKVKREVKNITLTPYLMLDSACLTEYTSIVKNLVKTKKFVI
LIPTAVLSDLDELKKHSEGARNAIKWLEFELSKGNRFLRSQKSHEVLPMPLIRVPKKLDR
DGALFHQIVQFCNHLVSNHADQESGPADIITYLSGDSLHDKKLYNSSYVGILEAIPVKFE
QIVTFYASYKRK
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgacagtttacataagatcggtgtacacgctggtcaagcagcaggacgagcgcaagggc
gcgctcacgctggccacgctggcgaccgagccggccttcctggaggaacaccgccagctg
gtggcccgctgcgtgacgctgctgttcgaggactttgagacggtgggcaagaaggcgcgg
gagattctgtggcgcaagggttattacgacctgattacggtgttcaagaagcacgccctg
cagctggcgcagcagcggaaatcggcgctgcgaggggatgagttggcgcgggttgcggcg
gacgaggtgttgctgcggcagggcgttgagcggctgctgctggacggggttaaccatttg
aaggtgattgtgctgcggctgggacagatctttaatttggatcggctgcggtatgttgtg
agctacgagctgctggagaattatgatgatgagctgttggtgcgggagtcgagttgctac
gagaacttgaacttgaaggaggaacggagcgaggaggagaagaaggtgatttacaccaag
caggagatttcgtttgcgctggagtcggtgcacgcgttgctgacttcgttgggcgatttg
caccggtactattgcgagtttggattggacgggttgagcaacgttaaggaggtgacggcg
agttactactgggaggcgttcaagctgaatacgaaggttgggataacgcagaaccagctg
gggacgctgtacaatgggaggaactacaacctggactcggtttatcattatttgtactcg
ctgtgctgtccgattccgttcgagtgcagcgagccgaacgtgagcaggatcttccagaaa
aacattcgctatctggagtcgaacggcggggcggacgtggaggaggaggactacgccgtg
cgggagtttatggcgaagtttttgctggtcgttgacgtgttcttctacgataagagtgtg
agcgactttacgagcttgtgccactcggtgttgatcgatttcaagaatgtgctgggagcg
cgtcgcctcgtggacgacgagtactacatgacggacgagttcatcttcaagatcgtgtcg
attctgttcttctgtatgtaccggctgcagctgaacagttcggagaagatttacagcttg
aacgcgttcatggtggcgctgtgctcggagctgctcgagtactgcacgatggcggtggag
aagtacgtggtggagaacgtccgcgaggacaagaagttccgcgaactgtacacggccatg
taccagcgctacgacgacgaggttcgccggtctcggcagatggtgaaggacggcacggcc
ggggggatctttaccaaggatcagaagtcttcttcgggtgtggaggaaggaaatgggagc
gaggatcattccaataaggagaacgacgagcgcaagagccaggccagttcgggcaagcag
ggtggaggattgaagaagaagcacgctcgcagacgccgtcgtgccatgtcgaatgagtcc
gagtcggagttgtcggacgataccagcgactgccagttggattcggattccggcgaggac
gatgacgacgaggaggacgatgatggtgattctatttcgagcttcgagtcgtacgacgat
ttctccgacgaagaggatgaagttgagcagcgtaatgagtcgttcggtgagcgtaacgga
aatgaaccggttgagttgcaacgcgccgaggaagcgaacaacaatctggaccagaaccaa
accgcttccgttcagctcaagttcaagaagcgctaccacaagctgaacccgaacgtggtg
attgagtttgccgagcaggagcgaacgatgcgttcgctcaaactcctgtttgactggctg
cacaccaacctggacatcctgatcgggtgctaccagtccaacccggagtttctgcacaac
atcatgaagctcctgaaccacttcaacatcgacatcttctccaaccgctacttcttcccg
cgcgagctcatcaccgcgcccgccatccgcgaggacttccgccagctgttcgaggcccgg
cgcggcatcccgctccaggaagacatcgccatgaagcggttcccgctgtttgacgcggcc
caggaagggctcgactgggaaaccaactaccgcttgggcgtgactccgtcggagcagagc
ttcttgcgcgtcatgaagctggtcgattttggcttttcgctgtgcaagtcgaagaagttc
gagtacgcgttctgtcccaagtcgcgcgacttcagcctgaagagcaccaagcagacgaag
cagcagcagcgcggcggcaagcgggaggagttgaatagacgggtcgttggtgtgcataag
gagctcgtggggacgaaccgtgcggcgcgtcgtcgcgagcagcaggaggaaaagcgtcgc
gccaagaagctggttcaacgggaggaacgtgggcagcgggagcgtgagcccaggacgcgt
cgtaaccgtaaccggcagaacgcgggaagagtgggcgggttgggatccggtggtgaaggt
cagcgttcgagccaggaaggtgagggcaagtttgctgcgccggcgatcatcaccaagaag
ggctacctgaagaaccgcggattgacgctgcgcaaccggaaggagccggtggactcgggc
cactcggagagcacggccgacgagggtggagtagtcgctgggcagcgcggcgaggagaag
aacattaacgagctgatgggacagctttggctgcgcgacgaggtgaagaagctggagacc
aaggtgaagcgggaggtcaaaaacattacgctcacgccgtatctgatgctggactcggcc
tgtctgaccgagtacacgtccatcgtgaagaacctggtcaagacgaagaagtttgtaata
ctgattccgacggcggttctttccgacttggacgagctgaagaagcacagcgaaggagct
cgcaacgccatcaagtggctcgagttcgagttgagcaagggcaaccggttcctgcgctcc
cagaagagccacgaggtgctgccaatgccgttgatccgcgtcccgaagaagcttgaccgc
gacggcgccctcttccaccagatcgtgcagttctgcaaccacctggtgtcgaaccacgcc
gaccaggagagcggtcccgccgacatcatcacgtacctgtcgggcgattcgctgcacgac
aagaagctgtacaactcgagctacgtcggcatcctggaggcgatcccggtcaagtttgag
cagatcgtcacgttctacgcgagctacaaacgcaaatga
DBGET
integrated database retrieval system
