Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ006481
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Entry
CpipJ_CPIJ006481 CDS
T01079
Name
(GenBank) TFIIH basal transcription factor complex helicase XPB subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03022
Basal transcription factors
cqu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CpipJ_CPIJ006481
09124 Replication and repair
03420 Nucleotide excision repair
CpipJ_CPIJ006481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqu03021
]
CpipJ_CPIJ006481
03400 DNA repair and recombination proteins [BR:
cqu03400
]
CpipJ_CPIJ006481
Enzymes [BR:
cqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CpipJ_CPIJ006481
Transcription machinery [BR:
cqu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CpipJ_CPIJ006481
DNA repair and recombination proteins [BR:
cqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CpipJ_CPIJ006481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
TniB
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
EDS28102
UniProt:
B0WI20
LinkDB
All DBs
AA seq
810 aa
AA seq
DB search
MGPPKKSSKKDRPSSSSAAGSSTGGFVENKWKKRRPEDDAYSSLANDDDDSSMDGAGGEF
VPGAASKNAEKNDDGIGEDEYGAKDYRSQMQLKPDNASRPLWVAPNGHIFLESFSPVYKH
AHDFLIAISEPVCRPEHIHEYKLTAYSLYAAVSVGLQTHDIIEYLKRLSKCTVPDGIQEF
IRLCTLSYGKVKLVLKHNKYFVESPHPEVLQKLLKDPVIQSCRLRRTNEEGEGFITQTME
KKGITAFGTTKIGPTTVVPGAEAEKPAEPENAAPVPDDITNFYDKMDNEEEEEEANFNTV
SFEVNQEKIEVLQKRCIEIEFPLLAEYDFRNDTINADINIDLKPAAVLRPYQEKSLRKMF
GNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSM
ICRFTSEAKDKPMGCGILVTTYSMITHTQKRSWEAEQTMRWLQEQEWGIMVLDEVHTIPA
KMFRRVLTIVQSHCKLGLTATLLREDDKIADLNFLIGPKLYEANWLELQKRGYIARVQCA
EVWCPMAPEFYREYLVTKTSKKMLLYVMNPQKFRACQYLIRYHEKRGDKTIVFSDNVFAL
KHYAIKMNKPYIYGPTSQNERIQILQNFKFNPKVNTIFVSKVADTSFDLPEANVLIQISS
HGGSRRQEAQRLGRILRAKKGAIAEEYNAFFYTLVSQDTLEMGYSRKRQRFLVNQGYSYK
VITHLAGMESDPDLFYKTREEQGQLLQQVLSASDMDCEDERIPGEGGAPRPGGSKRTGGL
SSMSGADDAVYMEFRKKKEHLHPLFKKFRG
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgccgaagaaatcttcgaagaaggaccgcccttcgagcagctcggccgcgggt
tccagcacgggtggcttcgtggaaaacaagtggaagaagcgccgtccggaagacgatgcg
tactcgtcgctggcgaacgatgatgatgacagcagcatggacggggccgggggtgaattt
gtgccgggagcggccagcaagaacgcggagaaaaacgacgacggaatcggggaggacgag
tacggggcgaaggactaccggtcgcagatgcagctgaagccggataatgcgtcgcggccg
ctctgggtcgcaccgaatgggcacatatttctggagtcgttttcgccggtgtacaagcac
gcgcacgattttttgattgcgatttccgagccggtttgtcgtccggaacacatccacgag
tacaagctgacggcgtacagtctgtacgcggccgtttcggtgggactgcaaacgcacgat
attattgagtatctgaagcggctcagcaagtgtacggttcctgacggaatccaggagttt
atccggctgtgtacgctatcgtacggcaaggtcaagctggtgctgaagcacaacaagtat
tttgtggagagcccccatccggaggtgctgcagaagctgctgaaggatccggtgattcag
tcgtgccggttgcggcgaaccaacgaggaaggggagggattcatcacgcaaaccatggaa
aagaagggaattacggcgtttgggacgaccaagattgggccgacgacggtggtgcccggt
gcggaggcggagaaaccggccgagccggaaaatgctgctccggttccggacgacattacg
aacttttacgacaaaatggacaacgaggaagaggaggaagaggcgaatttcaacaccgtt
tcgtttgaggtgaaccaggagaagattgaggtgctgcagaagcgttgcatcgagattgag
ttcccgctgttggcagagtacgatttccgaaacgatacgattaacgcggacattaacatc
gatttgaagccggcagctgtgctgcgcccgtatcaagagaagagtctgcggaagatgttc
ggaaatggacgtgcccgttcgggagttatagtgttgccttgcggtgctggtaaatctctg
gttggggttacggcctgctgtacggtgcgcaagcgtgccctggttctgtgcaacagcgga
gtttcggtggaacagtggaagcagcagttcaagatgtggtccaccgccgatgacagcatg
atctgtcgattcacctcggaagccaaggacaaaccgatgggttgcggcatcctggtgacg
acgtactccatgataacgcacacccagaagcgttcctgggaggcggaacaaacgatgcgc
tggctgcaggagcaagagtggggcataatggtcctcgacgaggtgcacaccattccggcc
aagatgttccgtcgagtgttgacgatcgtacagtcgcactgtaagctcggactgaccgcc
actttgcttcgtgaggacgacaagattgccgacctgaacttcctcattgggccgaagctg
tacgaagccaactggttggagctgcagaagcgaggctacatcgcccgagttcagtgcgcc
gaagtgtggtgtccgatggctccggagttttaccgcgaatatctcgtcacgaagacgtcc
aaaaagatgctgctgtacgtaatgaacccgcaaaagttccgcgcctgtcagtatctgatc
cgctaccacgagaaacgtggcgacaaaacgatcgtcttcagcgataacgtgttcgccctc
aagcactacgccatcaagatgaacaaaccgtacatctacggccccacctctcagaacgag
cgaatccagatcctgcagaacttcaagttcaaccccaaagtgaacaccatcttcgtgagt
aaggtcgccgacaccagtttcgatttgcccgaagcgaacgtcctcatccagatctcctcg
cacggaggttcccgtcgtcaggaggcgcaacgtctcggccgtattctgcgcgccaaaaag
ggcgccatcgcggaagagtacaacgcgttcttctacacgctcgtctcgcaggacacactc
gagatgggctactcgcgcaagcgtcagcggttcctggtgaaccagggctacagctacaag
gtgattacgcacctggccggcatggagagtgatccggatttgttctacaagacgcgcgag
gagcagggccagctgctgcagcaggttctgtcggcgtccgacatggactgcgaggacgag
cgcattccgggcgaggggggagcgccgaggccgggcgggtcgaagcgaaccggtgggctc
agctcgatgtccggcgcggacgacgcggtgtacatggagttcaggaagaagaaggagcat
ctgcatccgctgtttaagaagtttaggggataa
DBGET
integrated database retrieval system
