Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ006573
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Entry
CpipJ_CPIJ006573 CDS
T01079
Name
(GenBank) conserved hypothetical protein
KO
K14311
nuclear pore complex protein Nup188
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CpipJ_CPIJ006573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ006573
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CpipJ_CPIJ006573
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Motif
Other DBs
NCBI-ProteinID:
EDS27563
UniProt:
B0WH56
LinkDB
All DBs
AA seq
1842 aa
AA seq
DB search
MKERKQEKLLGFATKLYQFLDIDAIQSWNILCFYLVNEYRGPANALADYISTESSMLSLL
NEIWAYYSLERMVMLKIVKNLLEFYNSGSHPYSREYKTVVDKIGFANLRKSYIGQLESLV
NETMPGKLIPGDMFNNQAKMVAWSERKMREVNETLHIILLIVHYDGIGVEEFARLFKLFK
GHSFGRVQQYLNNGNEAHSDMMKRITFSELAIVYRALDLSESAGDERWIDGVIKALDGEI
VTMHTFPEHGPLLLVWMLFNFRLQNRLDDDDLSSRYRQFGSRAIQLGVFEYLLAMVQHST
FNDHSIVCRVTRKAIFNQLGFLCQLFDSDGSVAQHAKIYDLLSELLHSPSIAAEFCKNED
NPVRSLFDTTLENFPVDFTPLAMIAHALASAGTNQNKYIHDLLENLPVYSEVYNPDHYEL
RPSAMNEDEFILAHDYVPFRKIGYVVPRGTSTIVIDKRSHTLAHFRTKFNFYAALHREIN
ELLSDALSYTQLNEDRIQRITTGLRYLAVAVKRIHQPHEISSEMVHPTEMVFDILLKFKV
IQAPPIELLAECLNVCAALVPLFEPEIYARVINLNILPTVNNANLDFKDYAAGTSFESSL
IGFYLVNYEKNAGKYCILMAYLNFLKTYTKLGKNNVFGVELPGLIFLLREVFPHAHTWRF
ENESERQKIYVFILQYLFEILQLSPEALKNDYPRTILRNVCVYSLLDLDNGMTLLKFVGV
GNAYLQSVMENETSWMMAPEQSMNQLVQLSMTILMQILRLKHHVIPDPKLLSPLESAIYT
QPKQRDTLRIIPVVTGYMNNIFNRRLPILSCRLLRRFSIEFKMSLLACLDMEPDQIRVIF
LQRLRDDLESDNLKIAVLEFVEACIHKQPGLTEAFFKVHYDNVEQRLFLGVKPGKKKNIS
DGIPTYMEEYLEAISSDPKKLESPLLSRIMSLFHALWKNNMQILCKDLLEKKTFWSSLCN
PLFGNISENVKAYSQLFNILGIELFKIDSAKQVDEDLKKVYEKFLDYDVFSRWVRAVFDL
PKTTGKVNDDSSLCASPVVDETPEWLSRLQCFKDLLVLLIRKKDTGVHLPDRSKRFLADQ
CLNVLLERAEYADDLRPFVILAELYLVVLSDYEHKYTENAEQDAQVLTKIQDLLNALAIS
YKELHRRAKESILAIAIKTVELQADQLIEHDAIISSVTRSAVDVVCQEVYDLEITTRIEL
KSPKVLTLTQRDQVPLLLALTLVKKLVLVFEEHESPPARWQCWFVRAKIFQRLLSITSTL
LQNYSRRKITAEVLELLVVLAKSRRCSAEMLHCDIGDYLWLKLLPPKELLQRPYVMPDET
GHKWKTQDWWPIYTKGIELVRVLLGQHRQRFFKDAIFFAGIHEEFLMDSLLLAKQSMEGN
AIALIKGTLELLCELVNYEKEWRLEHGQSLINLMRCVQVLMDHAVSLLYRPKILKRLAEG
PSVPDLSHEQHDDPNAVDTSDELVTAMNNSVEIVTLCAKCLLKFSPTLLSLLCDVHFLPG
KWYPLIEIQFGVPKMNAESASQLSFGTVLRAVCMFTKVLNVQHYSFQETPLNQLPPSKSG
ESDGFDVTPSLSNSALARLNKSALAAASPDGTPSRPSSSARTPFSKSLSMTSVSSFTSTN
AIALSNELLTHLDTKLCISGLEFVLTLLASQSLLALKDANLSQREKQLIKRELSTELLIF
HDFVKKRILKDSKEILTRKKYGSVPILNSYDDDDADDNEDADSRASPLQQAPPKKPDRSM
RVNVVRKQHLQQTASTPKMSSSTPAPRGILKPSTSGPVKRVMFEDGLEAGMKTFAYAMPE
EDPIYYEPEESKYTGLSYVRIVEEDYLHLLSNLFLIISQSEN
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagcgcaagcaggagaagctgctgggtttcgcgaccaagctgtaccagtttctg
gacattgacgccatccagtcgtggaacattttgtgcttttatctggtgaatgagtaccgc
gggccggcgaatgcgctggcggattacatctcgacggagagttcgatgctgagcttgctg
aacgagatttgggcgtactactcgttggagcggatggtgatgctgaagattgtgaagaat
ttgctggagttttacaactcggggagccatccgtactcgcgggagtacaaaacggtggtg
gataagattgggtttgcgaatttgcgcaagtcgtacattggccagctggagagtttggtg
aacgagacgatgccgggcaagctgattccgggcgatatgtttaacaaccaggcaaagatg
gttgcatggtcggagcggaagatgcgagaggttaacgaaacgttgcacattatattgttg
attgttcactacgacggtattggggtggaagagtttgcgaggttgttcaaactgttcaag
gggcattcgtttggtcgagtgcagcagtatctgaacaatggcaatgaagcgcacagcgat
atgatgaagaggataacgttcagcgagttggccatcgtgtaccgagcgttggatttgagc
gaaagtgccggagacgagcgttggatcgacggagtaatcaaggccttggacggagagatt
gtaacgatgcacacgtttcccgagcacggtccgttgctgctggtgtggatgctgttcaac
tttcggctgcagaaccgattggacgacgacgatttgtccagccgatatcgtcagtttggc
tcgcgggcgattcagttgggcgttttcgaatacctgctggccatggtgcagcactccacg
ttcaacgatcacagcatcgtttgtcgagtcacgaggaaggccatcttcaaccagttggga
ttcctgtgtcagctgttcgattcggatggttctgttgcgcagcacgctaaaatctacgac
ctgctaagcgaactgttgcatagtccttcgatcgcggcagaattctgcaaaaacgaagac
aatcccgtccgctcgctgttcgacacgacgttggagaatttccccgtagatttcacccca
ctggccatgatcgcgcacgcactggcctccgccggcaccaaccagaacaagtacatccac
gatctgttggaaaaccttccagtatacagtgaggtctacaacccggaccactacgaactg
cgcccgtccgcgatgaacgaagacgagttcatcctggcgcacgattacgttcccttccgg
aagatcggctacgtcgtcccgcgtggaacctccacgatcgtgatcgacaagcgatcgcac
accctagcgcatttccgcaccaagtttaacttttacgccgcacttcatcgcgagatcaac
gagctgctgtcggacgccctctcgtacacgcagctcaacgaggatcgcattcagcgcatt
acgacgggactgcggtacctggcggtggccgtgaagcgcatccaccagccgcacgagatc
agctcggagatggtgcacccgacggagatggtgtttgacatcttgctcaagtttaaggtg
atccaggcgccgccgattgagctgctggcggagtgcttgaacgtttgtgccgcgctggtg
ccgctgtttgagccggaaatctacgcccgggtgatcaatttgaacatcctgccgacggtg
aacaacgcaaacttggattttaaagactacgctgcggggacgagctttgagtctagtttg
atcggattctacttggtgaattacgagaagaatgctgggaagtattgcatcctgatggcg
tacctgaacttcctgaagacgtacacaaagttggggaagaataatgtatttggtgttgaa
cttccggggttgattttcctgttgcgggaggtcttcccgcacgcccacacctggcgcttt
gaaaacgaatccgagcggcagaaaatctacgtttttattctgcagtacctgtttgaaatc
ctccagctctcgccggaagccctcaagaacgactatccgcggacgatcctgcgcaacgtg
tgcgtgtacagtctgctcgacctggacaacggcatgacgctgctcaagtttgtcggcgtc
ggcaacgcgtacctccagtccgtgatggagaacgaaaccagctggatgatggcgcccgag
cagagcatgaaccagctggtgcaactctccatgacgatactcatgcaaatcttgcgcctc
aagcaccacgtcatcccggatccaaagctgctgtccccgctcgagtccgccatctacact
cagcccaagcagcgggacaccctgcggatcatcccggtcgtcaccggctacatgaacaac
atcttcaaccgccgactcccaattctttcctgtcgcctactccgacgcttctcgatcgag
ttcaaaatgtcactcctagcttgtctcgacatggagcccgaccagatccgggtcatcttc
ctgcagcgcctgcgggacgacctggaaagtgacaacctgaaaattgccgtgctcgagttc
gtagaggcgtgcatccacaagcaacctggtctgacggaagccttcttcaaggtgcactac
gacaacgtcgagcagcggctcttcctgggcgtgaagccgggcaagaagaagaacatcagc
gacggcatcccgacctacatggaggaatatctggaggcgatctcgagcgatccgaagaag
ctggagagtccgctgctgtcgcggatcatgtcgctgttccacgcgctctggaagaacaac
atgcagattctgtgcaaggatctgctcgagaagaagaccttctggagttcgctgtgcaat
ccgctgttcgggaacatcagcgagaacgtcaaagcgtacagccagctgtttaacatcctg
gggatcgagctgttcaaaatagactccgccaaacaggtcgacgaggatctgaaaaaagtg
tacgaaaagtttctcgattacgacgtgttttcgcggtgggttcgcgccgtattcgacctg
cccaaaacgacggggaaggtcaatgacgacagctcgctgtgcgcgtcaccggtcgtcgac
gaaactcccgagtggctaagccggctgcagtgcttcaaagatctgctggtgttactcatt
cgcaagaaggacaccggcgtccatctgcccgaccgcagcaagcgcttcctggcggaccag
tgcctgaacgtgctgctcgaacgcgccgagtacgccgacgatctgcgcccgtttgtgatt
ctggctgaactctaccttgtcgtgttgtccgattacgagcacaaatacaccgagaacgcc
gaacaggacgcccaagtcctcacgaagatccaagacctgctcaacgcactcgccatcagc
tacaaagagttgcaccgccgtgccaaagagtccatcctggccatagccatcaaaaccgtg
gaacttcaagcggaccaactcattgaacacgacgccatcatctcgagtgtcacgcggtcc
gccgtcgacgtcgtctgccaggaagtgtacgacctcgaaatcaccacccgaatcgaactc
aagtccccgaaagtcctcacactaacacaacgagaccaagtcccgctcctactcgcgcta
accctcgtcaaaaagctcgtcctggtgttcgaggagcacgaaagccccccggcccgttgg
cagtgctggttcgttcgggccaagatcttccagcggctgctcagcatcaccagcacgctg
ctgcagaactattcccggcggaagatcacggccgaggtgctcgaactgttggtggtgctg
gccaagagtcgtcgctgctcggccgaaatgctgcactgcgacatcggcgattatctgtgg
ctgaagctgctgccgccgaaggagctgctgcagcggccgtacgtgatgcccgatgagacg
ggccacaagtggaaaacccaggactggtggcccatctacacgaagggcatcgagctggtg
cgggttctgttgggccagcatcggcagcgcttcttcaaggacgccatctttttcgccggc
atccacgaggagttcctgatggactcgctgctgctggcgaaacaatcgatggaggggaac
gctatcgctctgatcaagggcacgctcgagctgctttgcgagttggtcaactacgagaag
gagtggcggctggaacatgggcagagcttgatcaatttgatgcgctgcgttcaagttttg
atggaccacgccgtatcgttgctgtatcggccgaaaatcttgaagcgtctcgccgagggg
ccatcggtgccggatttgagccacgagcagcacgacgacccaaacgccgtagacacctcg
gacgagctcgtcacagcgatgaacaactcggtggagatcgtaacgctgtgcgccaagtgt
ctgctcaagttcagcccaaccctgttgagtttgctgtgcgatgtgcactttctgcctggg
aagtggtacccgttgatcgagattcagtttggtgtgcccaagatgaacgccgagagtgcc
tcccagttgagctttggaacggtgctgcgagcggtttgcatgttcaccaaggtgttgaac
gtgcaacactactcgttccaggagaccccactcaaccaactgccaccctcgaaatctggc
gaatcggacggcttcgacgtcactccctcactctccaactcggccctagctcgactcaac
aagtccgctctggccgccgcctcacccgacggaaccccgtcccgcccgtcgagcagcgca
cgcacacccttctccaagtccctctcgatgacctcggtgtccagcttcacctctaccaac
gccatcgccctctccaacgaactgctcacccatctcgacaccaagctctgcatcagcggc
ctcgagttcgtactcaccctactcgcctcccaaagcttgctcgccctcaaggacgcaaac
ctatcccagcgtgagaagcaactcatcaagcgcgaactcagcaccgagctgctcatcttc
cacgatttcgtcaagaagcgcatcctcaaagactccaaagagatcctcacccgtaaaaag
tacggctccgtacccatcctcaacagctacgacgacgacgacgcagacgacaatgaagac
gcggacagccgggcaagcccactccaacaagccccgcccaagaaacccgaccgctcgatg
cgggtcaacgtggtccggaagcagcacctgcagcaaaccgcatccacgcccaagatgtcc
tcgtcgacgccggccccgcgtggcatcctaaagccgtccacctcgggtccggtcaagcgc
gtcatgtttgaggacgggttggaggccggaatgaagacgtttgcgtacgcgatgcccgaa
gaggatcccatctactacgagccggaggagagcaagtacacggggctgtcgtacgtgcgg
atcgtcgaggaggactatctgcatctgttgtcgaatttgtttttgattatatcgcagagc
gagaattga
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integrated database retrieval system
