Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ006836
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Entry
CpipJ_CPIJ006836 CDS
T01079
Name
(GenBank) histone deacetylase Rpd3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03082
ATP-dependent chromatin remodeling
cqu03083
Polycomb repressive complex
cqu04213
Longevity regulating pathway - multiple species
cqu04330
Notch signaling pathway
cqu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CpipJ_CPIJ006836
03083 Polycomb repressive complex
CpipJ_CPIJ006836
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
CpipJ_CPIJ006836
04350 TGF-beta signaling pathway
CpipJ_CPIJ006836
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
CpipJ_CPIJ006836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqu03036
]
CpipJ_CPIJ006836
Enzymes [BR:
cqu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CpipJ_CPIJ006836
Chromosome and associated proteins [BR:
cqu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
CpipJ_CPIJ006836
HDAC complexes
Sin3A-HDAC complex
CpipJ_CPIJ006836
BRAF-HDAC complex
CpipJ_CPIJ006836
REST complex
CpipJ_CPIJ006836
SHIP complex
CpipJ_CPIJ006836
MiDAC complex
CpipJ_CPIJ006836
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
CpipJ_CPIJ006836
Heterochromatin formation proteins
Other heterochromatin formation proteins
CpipJ_CPIJ006836
Chromatin remodeling factors
NuRD complex
CpipJ_CPIJ006836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-ProteinID:
EDS29016
UniProt:
B0WJ91
LinkDB
All DBs
AA seq
489 aa
AA seq
DB search
MQSHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAD
EMTKFHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAV
KLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDG
VEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGRGKYYAVNIPLRDGMDDESYESIFV
PIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGG
YTIRNVSRCWTYETSVALGCEIANELPYNDYFEYFGPDFKLHISPSNMSNQNTTEYLEKI
KNRLFENLRMLPHAPGVQVQAIPEDAVNDESEDEDKVDKDERLPQTDKDKRIVPDNEFSD
SEDEGEGGRRDNRSYKGGARKRPRLEKEPKAEEAKDELEVKAETTADKEETTSTKAGEDS
KKETTATVA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctcacagcaagaagcgcgtttgctactactacgacagtgacatcggcaactat
tactatggccagggacatccgatgaagccgcaccggatacgtatgacgcacaacctgctg
ctcaactatgggctgtaccggaagatggagatatatagaccgcacaaggcaactgccgat
gaaatgaccaaattccactccgacgactacatccggttcctgcggtcaatccgcccagac
aacatgtccgagtataacaaacagatgcagcgattcaacgtcggcgaggattgtccggtg
tttgacgggttgtacgagttctgccagctgtccgccgggggttccgtggcggccgccgtc
aagctgaacaagcaagcgtccgagatctgcatcaactggggcggagggctgcatcacgcc
aaaaagtccgaagcgtccggcttctgctacgtgaacgacatcgtgctgggcatcctggaa
ctgctcaagtatcaccagcgcgtgctgtacatcgatatcgacgtgcaccacggcgacggg
gtggaggaggcgttctacacgacggaccgcgtcatgaccgtgagcttccacaagtacggc
gagtacttcccgggaacgggagatctgcgcgatattggtgccggcaggggaaagtactac
gcggtgaacattccgctgcgcgacggaatggacgacgagtcgtacgagtcgatctttgtg
ccgattatttcgaaggtcatggaaacgttccagccgtcggcggtggtgctccagtgcggt
gccgactccctgaccggcgaccggctcggctgcttcaacctgaccgtcaagggccacggc
aagtgcgtcgagtttgtgaaaaagtacaacctgccgttcctgatggtgggcggcggcggc
tacacgatccgcaacgtgtcccgctgctggacgtacgagacgtcggtggcgctgggctgc
gagatcgcgaacgagctgccgtacaacgactacttcgagtactttgggccggactttaag
ctgcacatcagcccgagcaacatgagcaaccagaacacgacggagtatctggagaagatc
aagaacaggctgttcgagaatctgcggatgttgccgcacgcgccgggcgtgcaggttcag
gccatcccggaggacgccgtgaacgatgagagcgaggacgaggacaaggtcgacaaggac
gaacggctgccgcagacggacaaggacaagcggatagtgccggacaacgagttttccgac
tcggaggacgagggcgagggcggccggcgggacaaccgctcgtacaagggtggcgcccgg
aagcgaccgcggctggagaaggaaccgaaagcggaggaagccaaggacgagctcgaagtg
aaagccgaaacgacggcggacaaagaggagaccaccagcaccaaagcgggcgaagactcg
aagaaggaaaccactgccactgttgcatga
DBGET
integrated database retrieval system
