Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ006842
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Entry
CpipJ_CPIJ006842 CDS
T01079
Name
(GenBank) small nuclear ribonucleoprotein sm
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03018
RNA degradation
cqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CpipJ_CPIJ006842
09123 Folding, sorting and degradation
03018 RNA degradation
CpipJ_CPIJ006842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ006842
03041 Spliceosome [BR:
cqu03041
]
CpipJ_CPIJ006842
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CpipJ_CPIJ006842
mRNA degradation factors
5'-3' decay
Lsm complex
CpipJ_CPIJ006842
Spliceosome [BR:
cqu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CpipJ_CPIJ006842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
E3_UbLigase_EDD
Motif
Other DBs
NCBI-ProteinID:
EDS28247
UniProt:
B0WI56
LinkDB
All DBs
AA seq
156 aa
AA seq
DB search
MWLVELKNGETYNGHLVSCDTWMNINLREVICTSKDGDKFWRMPECYIRGSTIKYLRIPD
EVIDMVKEDVQAKSRNRTELNKGGGGGGGRNQGGGGGMGQQGGRGGPGGGQRNNANNRNT
FGGGQGGGGGGGGGGGNRPNNRAGLGNPNRNALNKK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtggagctcaaaaatggcgaaacatacaacggtcacttggtgagctgcgac
acctggatgaacatcaatcttcgcgaggtcatctgcacatcaaaggacggtgataagttt
tggcgaatgcccgagtgttacatccgcggcagcaccatcaagtatctgcgcattccggac
gaggtgatcgacatggtgaaggaggacgtccaggccaagtcacggaaccggacggagctg
aacaagggcggcggcggcggtgggggccgcaaccagggcggaggtggcggcatgggtcag
cagggtggccgcggtggtcccggcggtggtcagcgcaacaatgccaacaatcggaacacc
ttcggtgggggacagggtggtggtggtggcggcggcggtggtggcgggaatcgacccaac
aaccgggccggcctgggcaatcccaatcggaacgcgctcaacaagaagtaa
DBGET
integrated database retrieval system
