Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ007655
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Entry
CpipJ_CPIJ007655 CDS
T01079
Name
(GenBank) DNA-directed RNA polymerase II 140 kDa polypeptide
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03020
RNA polymerase
cqu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CpipJ_CPIJ007655
09124 Replication and repair
03420 Nucleotide excision repair
CpipJ_CPIJ007655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqu03021
]
CpipJ_CPIJ007655
03400 DNA repair and recombination proteins [BR:
cqu03400
]
CpipJ_CPIJ007655
Enzymes [BR:
cqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CpipJ_CPIJ007655
Transcription machinery [BR:
cqu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CpipJ_CPIJ007655
DNA repair and recombination proteins [BR:
cqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CpipJ_CPIJ007655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-ProteinID:
EDS29768
UniProt:
B0WKE9
LinkDB
All DBs
AA seq
1176 aa
AA seq
DB search
MYENEDGDHFEEEDPEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPAIELTAEAQHTTGDIETPTRYVLKFDQIYLSKPTHWEKDGSPSPMMPNEARLRNLT
YSAPLYVDITKTKIVEGQDPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKSEIRSCLEHSSRPTSTLWCNM
MARGGQSIKKSAIGQRVIAILPYVKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLLKEVRMYA
QKFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVS
EVSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLRKNHVDMLKERDYNNYGWQVLVAS
GVVEYIDTLEEETVMIAMTPYDLKQDKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINS
IVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKKIGDQEEQFEKPNRQTCQ
GMRNALYDKLDDDGIIAPGLRVSGDDVVIGKTITLPETDDDLDGTTKRYSKRDGSTFLRN
SETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTC
EGLTPDIIINPHAIPSRMTIGHLIECIQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEY
GYQLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGR
ARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANMRNNTFECK
GCKNKTQISQVKLPYAAKLLFQELMSMNIAPRLMVL
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaaaacgaggatggtgatcactttgaggaggaggatccggaggagatctcccac
gagctgtggcaggaggcctgctggatcgtcatcaacgcctacttcgacgagaagggtttg
gtgcggcagcagctggacagtttcgacgagtttatccagatgtcggtgcagcgcatcgtg
gaggactcgccggccatcgagttgacggccgaggcgcagcacaccaccggggacattgag
acgccgacccgctacgtgttaaaattcgatcagatttatctttcgaagccgacccactgg
gagaaggatggttctccgtcgcccatgatgccgaacgaggcacgactgcggaacttgacc
tactcggcgccgctgtacgtggacattaccaaaacgaagatcgtcgagggtcaggatccg
gttgagacgcagcaccagaagacgttcatcggcaagatcccgattatgttgcgttctacg
tactgtctactttcgcagctaacggatcgtgatttgacggagttgaacgagtgtcccctc
gatccgggcggttacttcatcatcaacggttcggagaaggtgctgatcgcccaggagaag
atggccaccaacacggtgtacgtgttcagcatgaaggacggcaagtacgcgtacaagtcg
gaaatccgatcctgcctggagcacagctcgcgacccacctcgacgctgtggtgcaacatg
atggcacgcggaggtcaaagtatcaaaaaatccgccatcggtcagcgggtgatcgccatt
ctgccgtacgtcaagcaggagattccgatcatgatcgtgttccgagcacttgggttcgtc
gccgatcgtgacatcctcgagcacatcatctacgattttgacgatccggaaatgatggaa
atggtcaagccctcgctggatgaggcgttcgtcgtgcaagaacagaacgtggcgttgaac
tttatcggtgcgcgtggtgctcggcccggtgtcaccaaggacaagcgtattaagtacgcg
aaggaaatcctccagaaggaaatgttgccccacgtgggtgtgtcggacttttgcgaaacc
aagaaggcgtacttcctcggatacatggtccatcgactgctgctggctgccctgggccgt
cgtgaactggacgatcgtgatcactacggtaacaagcggttggatctggccggacccctt
ctagctttcctgttccgaggtctgttcaaaaaccttttgaaagaggttcgcatgtacgcc
cagaagtttatcgatcgtggaaaggacttcaacctggagttggcgatcaaaaccaagatc
atcaccgacggtctgcgctactcgctggccacaggtaactggggtgaccagaagaaggcc
catcaggcccgtgccggagtatctcaggtgttgaaccgactcacgttcgcctcgaccctg
tcccatttgcgtcgcgtcaactcaccgatcggtcgtgacggcaagctggccaagccacgt
cagctgcacaataccctgtggggtatgatctgtccggccgaaacgcccgagggagccgct
gtcggtctggtaaagaacctcgccctgatggcctacatctcggtcggatcgcaaccgtcg
cccattctggagttcttggaggagtggtccatggaaaatctggaagaaattgccccctcg
gcgatcgcggacgcaaccaagatcttcgtcaacgggtgctgggtcggaatccatcgtgac
cccgagcagctgatggccaccctgaggaagctgcgtcgtcagatggacatcatcgtgtcc
gaggtgtctatgattcgggacattcgtgatcgtgaaattcgaatctacaccgacgccggt
cgcatctgtcgaccactgttgatcgtcgagaacggaagtctgttgctgcgcaagaaccac
gttgacatgctgaaggagcgtgactacaataactacggttggcaggtgctggtcgcttcc
ggggtggtcgagtacatcgatacgctcgaggaggaaacggtcatgatcgccatgaccccg
tacgatctgaaacaggacaaggagtacgcgtactgtacgacctacacccactgcgagatt
cacccggcgatgatcctcggtgtttgcgcgtccattattccattccccgatcacaaccag
agtccgcgtaacacctatcaaagcgctatgggtaagcaagctatgggcgtgtacatcacc
aacttccacgtccggatggacaccctagcccacgtactctactacccgatgaaaccactc
gtcacgactcgctccatggaataccttcggttccgagagctccccgccggcatcaactcg
atcgtcgccatcttgtgctacaccggatacaaccaggaagattctgtcatcttgaacgcc
tccgccgtcgagcgtggcttcttccgatcggtgttctaccgttcgtacaaggactcggaa
agcaagaagatcggcgatcaggaagagcagttcgaaaagccgaaccgccaaacctgccaa
ggcatgcgaaacgccctgtacgacaagctggatgacgacggtatcatcgcgccaggactt
cgtgtctcgggtgacgacgtggtcatcggtaaaaccatcaccctccccgaaaccgacgac
gatctggacggaacaaccaagcggtacagcaagcgagacggctccaccttcctgcgtaac
tccgaaaccggaatcgtcgaccaggtcatgctgacgctcaacagcgaaggctacaagttc
tgcaagatccgtgtccgctcggtgcgtatcccccaaatcggcgacaagttcgcctcccgt
cacggtcagaagggtacctgcggaatccagtaccgccaggaggacatgccgttcacctgc
gaaggactcaccccggacatcatcatcaacccgcacgccatcccctcccgtatgacaatt
ggccatttgattgagtgcatccagggcaaactgggttcaaacaagggcgaaatcggtgac
gccacccccttcaacgatgccgtcaacgtgcagaagatttccaccttcctgcaggagtac
ggctaccagctgcgtggcaacgaggtcatgtacaacggacacaccggccgcaagatcaac
gcccaggtcttcctggggcccacctactatcagcgtctcaagcacatggtggacgacaaa
attcactcccgtgcccgcggccccgtccagattctcgtgcgccaacccatggagggtcgt
gcccgtgacggtgggctgcgtttcggcgagatggagcgcgattgccagatctcgcacggt
gccgcccagtttctgcgcgagcgcctgtttgaggtgtccgacccgtaccggatacacgtg
tgcaacttttgcgggctgatcgcgatcgccaacatgcgcaacaacacgttcgagtgcaag
ggctgcaagaacaagacacagatatcgcaggtcaagctgccgtacgcggccaagctgctg
ttccaggagctgatgtcgatgaacattgcgccgcggctgatggtgctgtaa
DBGET
integrated database retrieval system
