Entry
Name
(GenBank) U2 small nuclear ribonucleoprotein
KO
K12828 splicing factor 3B subunit 1
Organism
cqu Culex quinquefasciatus (southern house mosquito)
Pathway
Brite
KEGG Orthology (KO) [BR:cqu00001 ]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CpipJ_CPIJ009000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:cqu03041 ]
CpipJ_CPIJ009000
03036 Chromosome and associated proteins [BR:cqu03036 ]
CpipJ_CPIJ009000
Spliceosome [BR:cqu03041 ]
Complex A
U2 snRNP components
U2 snRNP specific factors
CpipJ_CPIJ009000
Complex B
CpipJ_CPIJ009000
Complex C
U2 SnRNP specific factors
CpipJ_CPIJ009000
Chromosome and associated proteins [BR:cqu03036 ]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
CpipJ_CPIJ009000
BRITE hierarchy
SSDB
Ortholog Paralog GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
AA seq
1400 aa AA seq DB search
MVKLLHSESTNRTTRSNYARKLCFCLVVCALPSDIPNKTLVELDLELDANGEIFLATLPL
RQLSKFSVKMENIPRTHEDIEAQIRDIQSKKKEISAEAAKDKGVGLLESGYYDADLYDGA
AGKGKYEGYVTSIAPNDDVDDDEDDGMPMGRGGDGGAGGGGRNRAPGYTAPAALLNDVAQ
PDADFDPFADRRRPTVGEKEDEYRQKRRRLVISPERADPFADGGKTPDVGSRSYTEIMRE
QMLKGEEVELRKKIQEKAKDGSLVVNRESSNGDGSSSKAAAESKKRGRWDQTVEESFVPP
KKLSTVPATPTWGDAEKTPADHRWDETPGHKGSETPGATPSARIWDATPAHSGATPGRET
PAEKSTRRNRWDETPKTERETPGHSWAETPRADRGPSDSVMDSTTPASKRRSRWDETPSN
ATPSAMTPSIAMTPTPHATPGHTTPLLTPGGSTPIGNKAMAMATPTPGHLASMTPEQLQA
YRWEKEIDERNRPFSDEELDAMFPPGYKVLPPPAGYIPIRTPARKLTATPTPMAGTPAGF
FIQQEDRSAKFIDNQPKGNLPFMKPEDAQYFDKLLLDVDEEALSPEEQKERKIMKLLLKI
KNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLD
DLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYV
RNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLK
SLVEIIEHGLVDEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLA
AFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEAQ
YIKEEILPHFFKHFWNHRMALDRRNYRQLVDTTVEIANKVGASEIINRVVDDLKDENEQY
RKMVMETIEKIMGNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLSKR
VKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAIVMKTCQEEKLMGHLGVVLYEYLGE
EYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIAD
RGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQ
ERQNRVCTTVAIAIVAETCRPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKD
YIYAVCPLLEDALMDRDLVHRQTACAAIKHMALGVYGFGCEDALIHLLNYVWPNIFETSP
HLVQAFMDAVEGLRVALGPIKILQYTLQGLFHPARKVRDVYWKIYNSLYIGAQDALIVGY
PRISNDPKNQYIRYELDYNI
NT seq
4203 nt NT seq +upstream nt +downstream nt
atggtaaagttgctacattcggaatcaaccaaccggacgacgcgatcgaattacgctcgc
aaactttgtttctgtttggtcgtttgcgcgttaccatccgatatcccgaacaagactttg
gtggagttggacctagagttggacgcaaatggtgagatttttctggcaacactgcccctc
cgccagctgtcaaagtttagtgtgaaaatggagaacataccacgaacgcacgaagacatc
gaggcccaaatccgggacatccagtccaagaagaaagaaataagcgccgaggccgcaaag
gacaagggcgtcggtttgctcgagagcggttactacgatgccgatttgtacgacggggct
gccgggaagggcaagtacgagggctacgtcacgtcgattgccccgaacgacgatgtggac
gacgacgaggacgacggaatgccgatgggacggggtggagatgggggagctggtggcggt
ggtaggaatcgagcgcccgggtataccgcgccggcggcgctgttgaacgatgtcgcgcag
cccgatgcagattttgatccgttcgcggaccggcgccgacctacggtcggtgagaaggag
gacgagtatcgccagaagcgacgtcgactggtcatctcgccggagcgtgccgatccgttt
gccgacggcggcaagactcccgatgtcggttcccgctcgtacacggagatcatgcgcgag
caaatgctcaagggcgaggaggttgagctccgcaaaaagatccaggaaaaggcaaaggac
ggatcgctggtggtcaaccgcgagtcgagcaacggagacggcagcagcagcaaggcggct
gcggaatcgaagaagcgtggccgctgggaccaaacggtggaggagtcgttcgtgccgccg
aagaagttgtccaccgtgccggcgacgccgacgtggggcgatgcggagaaaaccccggcc
gaccaccgctgggacgaaacgcccggccacaagggcagcgaaacgccgggggcgaccccg
agcgcacgcatctgggacgctacgccggcccactcgggagccactccggggcgggaaacc
cccgcggagaagtcaacgcgtcgcaatcgttgggacgagacgccgaagacggagcgtgaa
acaccgggccattcgtgggctgagactccccgtgccgatcgcggaccgagtgatagtgtg
atggacagcacaacgcctgcttcgaagcgacgttcgcgttgggacgaaacgccctcgaac
gctaccccgtcggccatgactccgtcgatcgcgatgaccccaaccccgcacgcaacaccc
ggacatacgacgcccctgctcaccccaggcggttccacccctatcggaaacaaagcgatg
gccatggccacgcccaccccaggccatctcgcgtcgatgaccccggaacagctgcaagcg
taccgctgggagaaggaaatcgacgaacgcaaccgaccgttcagcgacgaagaactggac
gccatgttcccgcccgggtacaaagtgctcccacccccagccggttacatcccaatccgt
acgccagcacgtaagctgaccgccacgccaaccccgatggccggaacccccgccggattc
ttcatccagcaggaggaccgcagcgccaagttcatcgacaaccaacccaagggcaatctg
cccttcatgaagccggaagatgcgcaatactttgacaagctgctgctggacgtggacgaa
gaagcgctcagtccggaggagcagaaggagcgtaaaattatgaaacttcttctgaagatc
aagaacggaacgcctccgatgaggaaggccgccctccgtcagatcaccgacaaggcgcgt
gaattcggcgcaggaccactcttcaaccaaattctacccctgctgatgagtcccaccctg
gaagaccaagagcgtcatctcctcgtcaaggtcatcgatcgcatcctttacaaactggac
gacctcgtgcgtccgtacgtgcacaagatcctggtcgtcatcgaaccgctcctgatcgac
gaagattactacgcccgcgtggaaggtcgtgaaatcatctccaacttggccaaggccgcc
ggcctcgccaccatgatctcaaccatgcgtcccgacattgacaacattgacgagtacgtg
cgaaacacgacggcgcgtgccttcgcggtggtcgcctccgcgctcggaatcccctccctg
ctacccttcctgaaggccgtctgcaagagtaagaagtcgtggcaggctcgtcacaccggc
atcaagatcgtccagcagattgccatcctgatgggttgcgccatcctgccccacctcaag
tcgctggtcgagattatcgagcacgggttggttgacgagcagcagaaggtgcgtacgatt
acggcgttggcgctagcagcgctggccgaggccgccactccgtacggtatcgagtcgttc
gattctgtgctgaagcccctctggaagggtatccggacgcatcgcggcaaaggtctcgcg
gcgttcctcaaagccatcggctatctgattccgctgatggacgccgagtacgccaactac
tacaccagggaagtgatgttgattctgattcgtgagttccagtcgccggacgaggagatg
aagaagattgtgctgaaggtcgtgaagcagtgctgcgcgacggacggtgtggaggcgcag
tacatcaaggaggaaatcctgccgcactttttcaaacacttttggaaccaccgaatggcg
ctggatcggcgaaactaccgccagctggtggacaccacggtggagattgccaacaaggtg
ggcgcgtccgagatcatcaaccgcgtcgtggacgatttgaaggacgaaaacgagcagtac
cgcaagatggtgatggagaccatcgagaagatcatgggcaatttgggcgccgccgacatc
gattcccggctggaggaacagctcatcgacggcattctgtacgcgttccaggaacagacc
accgaagacgtggtcatgctgaacggcttcggcacgatcgtcaaccagctgagcaagcgc
gtcaaaccgtatctccctcagatttgcggtaccatcctttggcgattgaacaacaaatcg
gccaaggtccgtcaacaagcagctgatcttatctcccgcatcgccatcgtcatgaagacc
tgccaggaggagaagctgatgggccatctgggcgtcgtcctctacgaatatctcggcgaa
gaatatcccgaagtactcggatccatcctgggcgccctcaaagccatcgtcaacgtaatc
ggaatgaccaaaatgacacccccaatcaaggacctcctaccccggctcacccccatcctc
aagaaccgtcacgaaaaggtccaggaaaactgcatcgacctggtcggtcgcatcgccgat
cgtggccccgagtacgtgtccgcccgcgagtggatgcgcatctgcttcgagcttctcgaa
ctgctcaaagcccacaaaaaagcgatccgacgagccaccgtcaacacgttcggttacatc
gccaaggccatcggcccgcacgacgtgctggccacgctgctaaacaacctcaaagtccaa
gagcgtcagaaccgtgtctgcacgaccgtcgccatcgccatcgtggccgaaacgtgtcgt
cccttcaccgtgctccccgccctcatgaacgagtaccgcgtgcccgaactcaacgtccag
aacggcgtcctcaaatcgctctccttcctgttcgagtacatcggagaaatgggcaaggac
tacatctacgccgtgtgccccctcctcgaggacgccctcatggatcgggacctggtccac
cgacagacggcgtgcgccgccatcaagcacatggccctcggagtgtacggctttggctgc
gaggacgcgctcatccatctgctcaactacgtgtggcccaacatcttcgagacgagcccc
cacttggtgcaagcattcatggacgccgtcgaggggcttcgggtggcgctcggaccgatc
aagatcctgcagtacacgctgcaggggctgttccatccggcgaggaaggtgcgcgacgtt
tactggaagatttacaactcgctgtacattggcgcccaggacgcgctgatcgtgggctat
ccgcgcatttccaacgatcccaagaatcagtacattcggtacgagctggactacaacatc
taa