KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ009000
Entry
CpipJ_CPIJ009000  CDS       T01079                                 
Name
(GenBank) U2 small nuclear ribonucleoprotein
  KO
K12828  splicing factor 3B subunit 1
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CpipJ_CPIJ009000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cqu03041]
    CpipJ_CPIJ009000
   03036 Chromosome and associated proteins [BR:cqu03036]
    CpipJ_CPIJ009000
Spliceosome [BR:cqu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CpipJ_CPIJ009000
 Complex B
    CpipJ_CPIJ009000
 Complex C
   U2 SnRNP specific factors
    CpipJ_CPIJ009000
Chromosome and associated proteins [BR:cqu03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    CpipJ_CPIJ009000
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG mTOR_dom Aconitase_2_N DUF2298 UNC45-central
Other DBs
NCBI-ProteinID: EDS32303
UniProt: B0WPC8
LinkDB
AA seq 1400 aa
MVKLLHSESTNRTTRSNYARKLCFCLVVCALPSDIPNKTLVELDLELDANGEIFLATLPL
RQLSKFSVKMENIPRTHEDIEAQIRDIQSKKKEISAEAAKDKGVGLLESGYYDADLYDGA
AGKGKYEGYVTSIAPNDDVDDDEDDGMPMGRGGDGGAGGGGRNRAPGYTAPAALLNDVAQ
PDADFDPFADRRRPTVGEKEDEYRQKRRRLVISPERADPFADGGKTPDVGSRSYTEIMRE
QMLKGEEVELRKKIQEKAKDGSLVVNRESSNGDGSSSKAAAESKKRGRWDQTVEESFVPP
KKLSTVPATPTWGDAEKTPADHRWDETPGHKGSETPGATPSARIWDATPAHSGATPGRET
PAEKSTRRNRWDETPKTERETPGHSWAETPRADRGPSDSVMDSTTPASKRRSRWDETPSN
ATPSAMTPSIAMTPTPHATPGHTTPLLTPGGSTPIGNKAMAMATPTPGHLASMTPEQLQA
YRWEKEIDERNRPFSDEELDAMFPPGYKVLPPPAGYIPIRTPARKLTATPTPMAGTPAGF
FIQQEDRSAKFIDNQPKGNLPFMKPEDAQYFDKLLLDVDEEALSPEEQKERKIMKLLLKI
KNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLD
DLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYV
RNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLK
SLVEIIEHGLVDEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLA
AFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEAQ
YIKEEILPHFFKHFWNHRMALDRRNYRQLVDTTVEIANKVGASEIINRVVDDLKDENEQY
RKMVMETIEKIMGNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLSKR
VKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAIVMKTCQEEKLMGHLGVVLYEYLGE
EYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIAD
RGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQ
ERQNRVCTTVAIAIVAETCRPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKD
YIYAVCPLLEDALMDRDLVHRQTACAAIKHMALGVYGFGCEDALIHLLNYVWPNIFETSP
HLVQAFMDAVEGLRVALGPIKILQYTLQGLFHPARKVRDVYWKIYNSLYIGAQDALIVGY
PRISNDPKNQYIRYELDYNI
NT seq 4203 nt   +upstreamnt  +downstreamnt
atggtaaagttgctacattcggaatcaaccaaccggacgacgcgatcgaattacgctcgc
aaactttgtttctgtttggtcgtttgcgcgttaccatccgatatcccgaacaagactttg
gtggagttggacctagagttggacgcaaatggtgagatttttctggcaacactgcccctc
cgccagctgtcaaagtttagtgtgaaaatggagaacataccacgaacgcacgaagacatc
gaggcccaaatccgggacatccagtccaagaagaaagaaataagcgccgaggccgcaaag
gacaagggcgtcggtttgctcgagagcggttactacgatgccgatttgtacgacggggct
gccgggaagggcaagtacgagggctacgtcacgtcgattgccccgaacgacgatgtggac
gacgacgaggacgacggaatgccgatgggacggggtggagatgggggagctggtggcggt
ggtaggaatcgagcgcccgggtataccgcgccggcggcgctgttgaacgatgtcgcgcag
cccgatgcagattttgatccgttcgcggaccggcgccgacctacggtcggtgagaaggag
gacgagtatcgccagaagcgacgtcgactggtcatctcgccggagcgtgccgatccgttt
gccgacggcggcaagactcccgatgtcggttcccgctcgtacacggagatcatgcgcgag
caaatgctcaagggcgaggaggttgagctccgcaaaaagatccaggaaaaggcaaaggac
ggatcgctggtggtcaaccgcgagtcgagcaacggagacggcagcagcagcaaggcggct
gcggaatcgaagaagcgtggccgctgggaccaaacggtggaggagtcgttcgtgccgccg
aagaagttgtccaccgtgccggcgacgccgacgtggggcgatgcggagaaaaccccggcc
gaccaccgctgggacgaaacgcccggccacaagggcagcgaaacgccgggggcgaccccg
agcgcacgcatctgggacgctacgccggcccactcgggagccactccggggcgggaaacc
cccgcggagaagtcaacgcgtcgcaatcgttgggacgagacgccgaagacggagcgtgaa
acaccgggccattcgtgggctgagactccccgtgccgatcgcggaccgagtgatagtgtg
atggacagcacaacgcctgcttcgaagcgacgttcgcgttgggacgaaacgccctcgaac
gctaccccgtcggccatgactccgtcgatcgcgatgaccccaaccccgcacgcaacaccc
ggacatacgacgcccctgctcaccccaggcggttccacccctatcggaaacaaagcgatg
gccatggccacgcccaccccaggccatctcgcgtcgatgaccccggaacagctgcaagcg
taccgctgggagaaggaaatcgacgaacgcaaccgaccgttcagcgacgaagaactggac
gccatgttcccgcccgggtacaaagtgctcccacccccagccggttacatcccaatccgt
acgccagcacgtaagctgaccgccacgccaaccccgatggccggaacccccgccggattc
ttcatccagcaggaggaccgcagcgccaagttcatcgacaaccaacccaagggcaatctg
cccttcatgaagccggaagatgcgcaatactttgacaagctgctgctggacgtggacgaa
gaagcgctcagtccggaggagcagaaggagcgtaaaattatgaaacttcttctgaagatc
aagaacggaacgcctccgatgaggaaggccgccctccgtcagatcaccgacaaggcgcgt
gaattcggcgcaggaccactcttcaaccaaattctacccctgctgatgagtcccaccctg
gaagaccaagagcgtcatctcctcgtcaaggtcatcgatcgcatcctttacaaactggac
gacctcgtgcgtccgtacgtgcacaagatcctggtcgtcatcgaaccgctcctgatcgac
gaagattactacgcccgcgtggaaggtcgtgaaatcatctccaacttggccaaggccgcc
ggcctcgccaccatgatctcaaccatgcgtcccgacattgacaacattgacgagtacgtg
cgaaacacgacggcgcgtgccttcgcggtggtcgcctccgcgctcggaatcccctccctg
ctacccttcctgaaggccgtctgcaagagtaagaagtcgtggcaggctcgtcacaccggc
atcaagatcgtccagcagattgccatcctgatgggttgcgccatcctgccccacctcaag
tcgctggtcgagattatcgagcacgggttggttgacgagcagcagaaggtgcgtacgatt
acggcgttggcgctagcagcgctggccgaggccgccactccgtacggtatcgagtcgttc
gattctgtgctgaagcccctctggaagggtatccggacgcatcgcggcaaaggtctcgcg
gcgttcctcaaagccatcggctatctgattccgctgatggacgccgagtacgccaactac
tacaccagggaagtgatgttgattctgattcgtgagttccagtcgccggacgaggagatg
aagaagattgtgctgaaggtcgtgaagcagtgctgcgcgacggacggtgtggaggcgcag
tacatcaaggaggaaatcctgccgcactttttcaaacacttttggaaccaccgaatggcg
ctggatcggcgaaactaccgccagctggtggacaccacggtggagattgccaacaaggtg
ggcgcgtccgagatcatcaaccgcgtcgtggacgatttgaaggacgaaaacgagcagtac
cgcaagatggtgatggagaccatcgagaagatcatgggcaatttgggcgccgccgacatc
gattcccggctggaggaacagctcatcgacggcattctgtacgcgttccaggaacagacc
accgaagacgtggtcatgctgaacggcttcggcacgatcgtcaaccagctgagcaagcgc
gtcaaaccgtatctccctcagatttgcggtaccatcctttggcgattgaacaacaaatcg
gccaaggtccgtcaacaagcagctgatcttatctcccgcatcgccatcgtcatgaagacc
tgccaggaggagaagctgatgggccatctgggcgtcgtcctctacgaatatctcggcgaa
gaatatcccgaagtactcggatccatcctgggcgccctcaaagccatcgtcaacgtaatc
ggaatgaccaaaatgacacccccaatcaaggacctcctaccccggctcacccccatcctc
aagaaccgtcacgaaaaggtccaggaaaactgcatcgacctggtcggtcgcatcgccgat
cgtggccccgagtacgtgtccgcccgcgagtggatgcgcatctgcttcgagcttctcgaa
ctgctcaaagcccacaaaaaagcgatccgacgagccaccgtcaacacgttcggttacatc
gccaaggccatcggcccgcacgacgtgctggccacgctgctaaacaacctcaaagtccaa
gagcgtcagaaccgtgtctgcacgaccgtcgccatcgccatcgtggccgaaacgtgtcgt
cccttcaccgtgctccccgccctcatgaacgagtaccgcgtgcccgaactcaacgtccag
aacggcgtcctcaaatcgctctccttcctgttcgagtacatcggagaaatgggcaaggac
tacatctacgccgtgtgccccctcctcgaggacgccctcatggatcgggacctggtccac
cgacagacggcgtgcgccgccatcaagcacatggccctcggagtgtacggctttggctgc
gaggacgcgctcatccatctgctcaactacgtgtggcccaacatcttcgagacgagcccc
cacttggtgcaagcattcatggacgccgtcgaggggcttcgggtggcgctcggaccgatc
aagatcctgcagtacacgctgcaggggctgttccatccggcgaggaaggtgcgcgacgtt
tactggaagatttacaactcgctgtacattggcgcccaggacgcgctgatcgtgggctat
ccgcgcatttccaacgatcccaagaatcagtacattcggtacgagctggactacaacatc
taa

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