Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ010111
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Entry
CpipJ_CPIJ010111 CDS
T01079
Name
(GenBank) conserved hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CpipJ_CPIJ010111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ010111
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CpipJ_CPIJ010111
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CpipJ_CPIJ010111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
HTH_5
Motif
Other DBs
NCBI-ProteinID:
EDS34460
UniProt:
B0WTL1
LinkDB
All DBs
AA seq
828 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSALLENRRLIETQMERFKVVERETKTKAYSKEGLGAAQKMDPAQRE
KEEISAWLATSISSLQIQIDQFECEIESLIAGKKKKLDKDKQEKMDELKGKLERHKFHVT
KLETLLRMLDNESVDVDQIKKIKEDVEYYIDSSQEPDFEENEYIYDDIIGLDEVEISGIG
ASAGTESNNSNETAGSPSSLISGNSPPPSPVMNCSAASTAMHNHSGGDLSAGLVSSIGGV
ALLDADKRPKDVKITPIKPTAIRATSGSKMDLSLTTAAIVGGTAVSLGAGTNNANASSNN
NTSIGGKPGLISSTPSKLHTNAAAIVAGAGVIVPNSSGIVAPQQPPGVIVQPLIGPAFAA
VAKQHPKNGSLHQSSVSGSSTTSSTASSASQPPSGAAAVAPNASGATVSNLSQIVNASQP
TLSQQLQQQQAQQQQTSLASSLLTNAAAVVAGSTPTSQQQVASGPNSIPLPHGGALSSAS
AGIENNHVMTSSAASSTINNCVSPSNSAVSSSRASPSLMSPPQQQQQLLNGPAILGKNAV
PHLHIADTHPMSTLKTIAQEVINRTGGGLEAGQSPATGALLQQQPSQAGGQQQQPPTAQQ
QPQPQPDTRQPGAGQQQQQPQAPQQQQQQPPPFSLVDPATAAAAAAANSANSLIPTSSST
AISNGPNAININTSTSIVANPAANNNPNVLSSAGVVPGMKTAGTNEAHIPPLLGVAPLGP
SPLQKEHQIQFQMMEAAYYHLPTPSDSERLRTYLQRQPVPTPQHYPQT
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgcgaaagttgcaaggtgaaatcgatcggtgtctgaagaaggtcactgag
ggtgtggaaacgttcgaggacatttggcaaaaggtgcacaatgccacgaacagtaaccaa
aaggaaaagtatgaagccgatctcaagaaggaaatcaaaaagctgcagcggctacgcgac
cagatcaagtcatggatcgcgtccggcgagatcaaggacaagagcgcgctgctggagaat
cgacgcctcatagagacccaaatggaacgcttcaaggtagtcgagcgggagacgaaaacg
aaagcgtactccaaggagggtttgggggcggcccagaagatggacccggcgcagcgggaa
aaggaagagattagcgcgtggttggcgacctcgatcagctcgctgcagatccagatcgac
cagtttgagtgcgagatcgagtcgctgatagcgggcaagaagaagaagctggataaggac
aagcaggagaagatggacgagctgaaggggaagctggagaggcacaagttccacgtgacg
aagctggagacgttgctgcggatgctggacaacgagagcgtcgacgtggaccaaatcaag
aagatcaaggaggacgtcgagtactacatcgattcgtcgcaggagcccgactttgaggag
aacgagtacatctacgacgatatcatcgggctggatgaggttgagatttccggtattgga
gcgtccgccggtacggaaagcaacaatagcaacgaaacggcaggatctccgagcagctta
atctccggcaacagtccgcccccgtcgcccgtcatgaactgcagtgcggcgtcgacggcg
atgcacaaccacagcggcggggacctgtccgccggtttggtgagtagtataggcggcgtt
gcgctactcgacgccgacaagcggcccaaggatgtcaagattacgccaataaaaccgacg
gcgatccgggcaacgagcggcagcaagatggacctcagcttaacgacggcagcgatcgtc
ggcggcacggcggtgagtctcggtgcgggcaccaacaatgccaatgccagcagtaacaac
aatacgtccatcggtggcaagccgggcctgatcagctcgacgcccagcaagctccacacg
aacgcggcagcgatcgtggcaggagcgggcgtgatcgtacccaacagtagcggtatcgtg
gcaccccagcagccgcccggtgtcatcgtccagccccttatcggtccggcgttcgcggcc
gtcgcgaagcagcatcctaaaaacggttccctgcaccagtccagcgtgtccggctcgtcg
acgacgtcctcgacggcgtccagtgctagccagccgccgtcgggtgccgccgccgtggca
ccgaacgcgtccggcgccaccgtcagcaacctcagtcagattgtgaacgcatctcaacct
acgcttagccagcagttgcagcagcagcaagcgcaacagcagcagacctctctcgcgtcc
agtttgttgacgaacgcggccgccgtggtagccggttcgacaccaacgtcgcagcagcaa
gtcgcgagcggccccaattccatacctctgccacacggaggcgctctctcgtcagcgtcg
gccggaatcgaaaacaaccacgtcatgacgagctcggccgcgtcctccacgatcaacaac
tgcgtttcgcccagcaactcggcggtcagcagcagtagagcgtcgccaagcttaatgtcc
ccgccacaacagcagcagcagctgctgaacggtccagcaatactcggtaagaatgccgta
ccccatctgcatatcgcagacactcacccgatgtctacattgaaaaccatagcccaggaa
gtgataaaccgaaccggtggtggtttggaagctggtcaatcgccagcgaccggcgcactg
ctccagcaacagccctcgcaagccggcggccagcagcagcaacctccgacggcacagcaa
cagccacagccccaaccagatacgagacaaccgggcgctggtcaacagcaacagcaacca
caagccccccaacagcagcagcagcaacctccgccgttctccctcgtggaccctgcgacg
gcggcggcggcggcggccgccaacagtgcaaactctctgataccaacgtcgtcatctact
gccatcagcaacgggccgaacgcgatcaatatcaacaccagcactagtattgtggcgaac
ccggcggccaacaacaacccgaacgtgctgtcgagcgccggcgtcgtccccggcatgaag
acggccggcacgaacgaagcgcacataccgcccctgctgggcgtggcaccgctcgggccg
tcgccactgcagaaggaacaccagatacaattccaaatgatggaagccgcgtattaccac
ttgccaacgccaagtgactcggaacggttacggacgtacctgcagcggcagcccgtacca
acgccacagcattatccacagacgtga
DBGET
integrated database retrieval system
