Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ010534
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Entry
CpipJ_CPIJ010534 CDS
T01079
Name
(GenBank) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqu03036
]
CpipJ_CPIJ010534
Chromosome and associated proteins [BR:
cqu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CpipJ_CPIJ010534
microRNA pathway
RISC loading complex
CpipJ_CPIJ010534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dimer
Ribonucleas_3_3
Helicase_C
DEAD
PAZ
ResIII
Dicer_platform
Dicer_dsRBD
dsrm
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
EDS34500
UniProt:
B0WTP2
LinkDB
All DBs
AA seq
1665 aa
AA seq
DB search
MQTIEETQKEDFVPRFYQSQMKDVCIAKNTIVYLPTGAGKTHIALMAIRELGRRGHLEKP
LSQGGKRTFFIVNTVALAKQQAEMIGRNVVFKTSVYTSDRDVDTWKQDRWLEEFAKYQII
VCTCQILLDVLKHGYLAMSHINLLVFDECHHGVGDHPMHGIMEQYLRARKEDRPRVIGLS
GMLLYKELKMKEQVAQELERLENTFDSTIATVGSYDAYTEVCRFSTDPKEGLLSFHVVQS
SDVMRNLQGQINDFINKVALFDLPKLLNQNKSLMRDMPKPKKVITKYFKELNYQFEDLGL
FGGAIALLGLIVQFELDKRESDHTMLRLLYRSCITFCENLRHQLENVMQGLEIKKKLTLF
SSIKARQLIAQLEGFYKEGRSRKTKTLIFVQRRFSAKVVYHLLKIYFSETENAETILPDF
MVGCNGTMPESIEQILSAKKDRRVLERFKKNETNVIVTTNVLEEGIDLQMCNSVIKFDYP
ETFASYEQSKGRARMKDSTYTVMLDSDKREKFLKKYLLYKEIEEELRRALVGKTINRPEP
LEADVTKELTNELIPPFYTKKGAKLDALSSIQLLNRYCMGMPRDAFTNTNVTWERHDDKY
TGKIVVAVLLPLQSTVRDKVFGQPMTNVKLAKRSAAFEACRKLYEAGELNDHLIPIDSKR
QLANVSEVYFRHWKQFEEESAKQAGTQKNVRNHQIRYPSQTSGCCPQPGKPCYIYVLRIA
AGFNSDVQNENIETFHTLYSSENNFGIMTTKPLPVLARMKFFVSLGLINVHLDPTPIRVE
NAGSDADLAALKQFQLMLFRDVLRLWKEFLVLDSSNEANSFLVVPLAQSRQIDWQVVKDF
PFLAQPSELSTVARSRMVFDAKQYRHRVILPWYRTDRERAYVVTAVHEHLTPGSPFPNEK
YQTYEDYFGTVYGQQICNKKQFLIEVKGITTWLNRLSPGDEDDGKSATRAKNWTFHEILI
PELCHNFAFPADYWLKATLLPSALHRINFLLLAENIRVELATEANVGCLECRTVEDVDVE
YKNRKSTDLANGMDELKFDSDEDEEDDDDDFDYEEAKKALVGPEDLNSLMRIQMNSFAEE
VEMPWKEQDEPVDIERNWDNVSALDLDYYDSFVRKFSSLNVGEQITTKMAQSYSSVIHKQ
ATRASPQKVAGAILDMSLDEKFRIALLKLTPENTVYVPLQQCAIIKALTTKSAHDVYDLE
RYELLGDAFLKFSVSLFLVKKHKEWHEGHLTAVKGQLVSNRNLLYCAMLINLPGMMKIHT
FDPKNDWSPPLASVPHAVKQKMASINHSARVLYKLKMSEEEIQAGTIEKDKYEDFIAELD
VQSRSLDTSPMQNYLSQQAMGDKMPADSMEAMLGVCVSTVGIKRSFRLLSFLGILPKKEN
LTTLLDDRIANQRLKADVTKNEVDSFLISPGRIERILDYTFKDRTYLLQALTHASYPTNR
ITGSYQQLEFVGDAVLDFLISAYIYEQNPTMSPGQLTDLRSALVNNITLACILVRHGLHL
YILSESASLTDTVSKFVAFQEAHKHEITDQVNLLSEESERCQGAMAEFVDVPKALGDVFE
SLIGAVFLDSGNDLEVTWRVIYGLMHHEIATFSVETPIQIVRRLYEWKPPCYPKFSQAIV
DDDTVLVKLRYRIRNVDHEAYGFGQNKEDAKRAAAKAAIQKLRKQ
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccattgaggaaacccaaaaagaggactttgttcctcggttctaccagagccaa
atgaaggacgtttgcattgccaaaaatacgatcgtctatctgcccaccggtgccggaaag
acgcacattgcgctgatggccattcgcgagctgggacgtcgtggtcatttggaaaagcca
ctttctcagggcggcaagcgcaccttcttcatcgtgaacacggtggcgctggccaagcag
caagcggaaatgatcggccgcaacgtggtcttcaagacgtcggtctacacgagtgatcgc
gacgtcgacacatggaagcaggaccgttggctcgaagaatttgccaagtaccagatcatc
gtgtgcacgtgtcagattctgctagatgtgctgaagcatggctatctggcaatgagccac
atcaacttgctggtttttgacgagtgtcaccacggcgtgggtgatcatccgatgcacggg
atcatggagcagtaccttagggcgcgtaaagaagaccggcctcgggtgattggcctgtcg
gggatgttgctgtacaaggagttgaaaatgaaagagcaagtggctcaggagttggaacgg
ctagagaatacgttcgactctacgattgcgaccgtcggaagttacgacgcgtacacggag
gtgtgcaggttttccacggacccgaaggagggcctgctttcgtttcacgtggtgcaatcg
tccgacgtgatgcgcaatttgcaggggcaaattaacgattttattaacaaagtagcactt
tttgatcttcccaaactgttgaaccagaacaaatcgctgatgcgagacatgccgaagccc
aaaaaggtgattacgaaatactttaaggaactgaactatcagtttgaagatttgggcctt
tttggtggcgccatagcgctgctcggactgatcgtgcagtttgagctggacaagcgtgaa
tcggaccacacgatgctgcgtttgctgtaccgatcgtgcatcacgttctgcgaaaatctt
cgccaccagctcgagaacgtgatgcaagggctggagataaagaaaaagttgacgctgttt
tcgtcgatcaaagcgcgccagctcatcgcccagctggaggggttctacaaggaaggtcgc
agccgtaaaacgaaaaccctgatctttgttcagcgtcgcttttcggcaaaggtggtgtac
catctgctgaagatttactttagcgaaaccgaaaacgccgaaaccattctgccggacttt
atggtcggatgcaacgggacgatgcccgagtcgatcgagcagatcttgtctgcgaaaaag
gatcgaagggtgttggagcgtttcaagaagaacgagacaaacgttatcgttacgacgaac
gtgctggaggagggcatcgatctgcagatgtgcaactcggtgataaagttcgattatccg
gaaacgttcgcctcgtacgagcagtcgaaagggcgagcacgcatgaaggacagcacgtac
accgtcatgttggacagcgataagcgggaaaagttcctgaagaagtatcttctctacaag
gaaatcgaggaggagctgagaagggcactggttggaaaaaccatcaaccgtccggaaccg
ctggaggcggatgtaaccaaggagctgaccaacgagctcatcccaccgttctacaccaag
aagggtgccaagttggacgccctttcgtcgatccagctgctcaaccggtactgtatgggc
atgccacgtgatgccttcaccaacacgaacgtcacctgggaacgacacgacgacaaatac
acgggtaaaattgtggtggccgttttgctgccgctgcagtctaccgtgcgtgacaaagtg
tttggccagcccatgaccaacgtcaagctggccaagcggtcggccgcgttcgaggcttgc
cggaagctgtacgaggcgggcgagctcaacgatcatctgattccgatcgattcgaagcgg
cagttggcaaacgtgagcgaggtttacttccgccactggaagcagtttgaggaagagtcg
gctaagcaagctggaacgcagaagaacgtccggaaccaccagatccggtacccgtcccaa
acgagtggttgctgccctcagcccggaaagccctgttacatctacgtgctgcgcatagcg
gccggtttcaactcggacgttcaaaacgagaacattgagacgttccacacgctgtacagc
agcgagaacaactttggcatcatgactacgaagccactgcccgtgctggcccggatgaag
tttttcgtgtcactcggcctgatcaacgtccacctagatccgaccccgattcgggtggag
aacgccggcagcgatgcggatttggccgcgctcaagcagtttcagctgatgctgttccgg
gatgtactgcggctgtggaaggagtttctggtgctggacagcagcaacgaagcaaacagt
tttttggtggttccgttggcgcagtcgcggcagatcgattggcaggtggtgaaggatttc
ccgttcctcgcccaaccttccgaactgtcgacggtcgctcgctcgcgcatggttttcgat
gcgaagcagtaccgccatcgggtcattctaccttggtatcgtacggacagagagcgcgcg
tacgtcgtgacggcggtccacgaacatctgacgccaggcagtccgtttccgaacgaaaag
tatcaaacatacgaggattacttcggcaccgtttacggccagcaaatctgcaataaaaaa
cagttcctgatcgaggtaaagggcatcaccacgtggcttaaccggctcagcccgggagat
gaagacgatggcaagagtgccacgcgggcgaagaactggaccttccacgaaattttgatt
ccggaactgtgccacaactttgccttcccggcggactactggctgaaggccacgctgcta
ccgagtgccctgcatcgaatcaacttcctcctgttggcggagaacatccgggtcgagttg
gccaccgaggcgaacgtcggttgtctcgagtgtagaaccgttgaggatgtggacgtggaa
tacaagaaccgcaagtcgactgacctggccaacggaatggacgagctgaagtttgacagt
gacgaggacgaggaagacgacgacgatgattttgattacgaggaggcaaaaaaagcgctc
gtaggcccggaagatttgaacagcttgatgcgtatccagatgaactcgttcgccgaggag
gttgaaatgccctggaaggaacaagacgaaccggtcgatattgaacgcaactgggacaat
gtctctgcgttggatctcgattattacgattcgtttgtgaggaagttttcaagccttaac
gtgggagagcaaattacgacaaagatggcccaatcttactcttctgtcatccacaagcaa
gccacccgtgcaagtccgcagaaggtcgccggagctatcctcgatatgtcgctggatgaa
aagttccgcattgcattgctgaagctaacaccggaaaacacggtatatgttccgctacag
cagtgtgccatcatcaaggcgttgaccaccaaaagtgcgcacgatgtctacgacttggaa
cggtacgaattgttgggcgacgccttcctcaagtttagcgtgtcgctatttttggtgaag
aagcacaaggagtggcacgagggccatctcacggcggtcaagggacaactggtcagcaac
cgaaatctgctgtactgtgcgatgctaatcaatttgcccggaatgatgaaaattcacacc
ttcgatccgaaaaatgactggtcgccaccactcgcaagcgtgccgcatgccgtgaagcaa
aagatggccagtatcaaccactcggccagagttctgtacaagctgaaaatgtccgaggaa
gaaattcaagcgggcaccatcgagaaggacaaatacgaggacttcattgccgagctggac
gtacagagccgatcgttggacacttcgcccatgcagaactacctgtcgcaacaggccatg
ggcgataagatgccggccgattccatggaggccatgctgggcgtttgcgtcagcacggtc
ggaatcaaacgatcctttagactgctgtcatttttgggcattcttcccaaaaaagaaaat
ctgacgacgttgctcgacgaccgtatcgcgaaccaacgcctcaaggcggatgtcaccaaa
aacgaagtggactcgttcctgatttctccgggacgtatcgagcgcatcctcgactacacg
ttcaaggatcgaacctacctgctgcaagctttgacgcacgcctcctatccgaccaaccgc
atcaccggatcgtaccagcagctcgagtttgttggagacgcagtgctggactttctgatc
tccgcctacatctacgagcagaacccaaccatgagtcccggccagctcacggatctacgg
tccgcactcgtgaacaatatcacgctggcctgcattcttgtccggcacggtcttcacctg
tacattctgtccgaatcggcatccctcaccgacaccgtcagcaagtttgtagcgttccag
gaagcgcacaagcacgaaatcaccgaccaggtgaacctgctgtcggaagaatccgagcgt
tgccagggcgcaatggccgaattcgtcgacgtgcccaaggcgctgggcgatgtgttcgag
agtttgatcggggccgtgttccttgactcgggcaacgacctggaagtgacgtggcgggtg
atttacggcctgatgcaccacgagattgcgacattcagtgtggaaacgccgatccagatc
gtgcgccgactgtacgagtggaagccaccgtgctatcccaagtttagccaggcaatcgtt
gatgacgacacggtgctggtgaagctgcgctatcgcattcgaaacgtcgatcatgaagcg
tacgggttcggtcagaacaaggaagatgccaagcgggccgctgccaaggcggcgattcag
aagcttcggaagcagtag
DBGET
integrated database retrieval system
